| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541782
Identifier: 73541782
GI number: 73541782
Start: 2302145
End: 2302981
Strand: Reverse
Name: 73541782
Synonym: Reut_A2094
Alternate gene names: NA
Gene position: 2302981-2302145 (Counterclockwise)
Preceding gene: 73541783
Following gene: 73541780
Centisome position: 60.5
GC content: 62.84
Gene sequence:
>837_bases ATGACCCCTGTGCTGGTATTCGACATCGAGACCATTCCCGATGTCGACGGCCTGCGCCGTTTGCATGACCATCCCGCATC GATGAGCGACGAGGAAGTCGCCGAGCAAGCGTTCTCAGCCCGCCGCGAAAAGACCGGAAGCGATTTCCTGCCGCACTATC TGCAGCGCGTCGCGGCGATCTCGTGCGTGTTGCGCCGGACGCAGCGCGACGGCTCGGCCGTGTTCCATGTCGGCTCGCTG GGAACGCTCGAGGATGGTGAGGCCACGCTGATCCAGAAGTTCTACGAACTGATTGCGCGCTACAGCCCGCAGCTTGTGTC GTGGAACGGTGGCGGCTTCGACTTGCCCGTGCTGCACTATCGTGGCCTGGTCCATGGCGTGACCGCGCCGCGATACTGGG AAATGGGCGAGGGCCGCGACGACGACAGCCGCGACTTCAAGTGGAACAACTACATCAGCCGCTACCACATGCGGCATCTG GACCTGATGGACCTCCTTGCCATGTACCAGCCGCGCGCAAGCGCGCCGCTGGATGACCTGGCCAAGCTGTGCGGCTTCCC AGGCAAGATGGGGATGGATGGCAGCAAAGTCTGGCAGGCGTACCGGGAAGGTCAGCTCGACGCGATCCGCGCCTATTGCG AGACCGACGTTGTCAACACCTACCTGATGTACTGCCGCTTCCAGCTCATGCGCGGCGGCCTGCTGCCGCGCGAGTTCGAT CTCGAGATGGAACTCGTGCAGGAATCGCTGGCCGAGCTGCCAGGCGAGCAGTGGATGGAATACCTGCGTGCATTCCGCCT GAAGCGCCTGACGCCAGAAGACGAAGAGATCGAGTAA
Upstream 100 bases:
>100_bases TGGGCCTGACGCGCGAACGCGTGCGCCAGATCCAACAGGAAGCCCTGGTCAAGCTCAAGCGGCATTTCGCATCGCAAGGT GTCAGGAAGGACGCTGTTCT
Downstream 100 bases:
>100_bases GTTGGCGAACGGTCGGCGGTCCCGCGGGCCTTTTCATATATCCAGTGACAGCACGATGGGCTGGTGATCCGAGTCCTTCG TCGCTGCATTGACTTCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTPVLVFDIETIPDVDGLRRLHDHPASMSDEEVAEQAFSARREKTGSDFLPHYLQRVAAISCVLRRTQRDGSAVFHVGSL GTLEDGEATLIQKFYELIARYSPQLVSWNGGGFDLPVLHYRGLVHGVTAPRYWEMGEGRDDDSRDFKWNNYISRYHMRHL DLMDLLAMYQPRASAPLDDLAKLCGFPGKMGMDGSKVWQAYREGQLDAIRAYCETDVVNTYLMYCRFQLMRGGLLPREFD LEMELVQESLAELPGEQWMEYLRAFRLKRLTPEDEEIE
Sequences:
>Translated_278_residues MTPVLVFDIETIPDVDGLRRLHDHPASMSDEEVAEQAFSARREKTGSDFLPHYLQRVAAISCVLRRTQRDGSAVFHVGSL GTLEDGEATLIQKFYELIARYSPQLVSWNGGGFDLPVLHYRGLVHGVTAPRYWEMGEGRDDDSRDFKWNNYISRYHMRHL DLMDLLAMYQPRASAPLDDLAKLCGFPGKMGMDGSKVWQAYREGQLDAIRAYCETDVVNTYLMYCRFQLMRGGLLPREFD LEMELVQESLAELPGEQWMEYLRAFRLKRLTPEDEEIE >Mature_277_residues TPVLVFDIETIPDVDGLRRLHDHPASMSDEEVAEQAFSARREKTGSDFLPHYLQRVAAISCVLRRTQRDGSAVFHVGSLG TLEDGEATLIQKFYELIARYSPQLVSWNGGGFDLPVLHYRGLVHGVTAPRYWEMGEGRDDDSRDFKWNNYISRYHMRHLD LMDLLAMYQPRASAPLDDLAKLCGFPGKMGMDGSKVWQAYREGQLDAIRAYCETDVVNTYLMYCRFQLMRGGLLPREFDL EMELVQESLAELPGEQWMEYLRAFRLKRLTPEDEEIE
Specific function: Unknown
COG id: COG3298
COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32054; Mature: 31923
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVLVFDIETIPDVDGLRRLHDHPASMSDEEVAEQAFSARREKTGSDFLPHYLQRVAAI CCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SCVLRRTQRDGSAVFHVGSLGTLEDGEATLIQKFYELIARYSPQLVSWNGGGFDLPVLHY HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH RGLVHGVTAPRYWEMGEGRDDDSRDFKWNNYISRYHMRHLDLMDLLAMYQPRASAPLDDL HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AKLCGFPGKMGMDGSKVWQAYREGQLDAIRAYCETDVVNTYLMYCRFQLMRGGLLPREFD HHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC LEMELVQESLAELPGEQWMEYLRAFRLKRLTPEDEEIE CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TPVLVFDIETIPDVDGLRRLHDHPASMSDEEVAEQAFSARREKTGSDFLPHYLQRVAAI CCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SCVLRRTQRDGSAVFHVGSLGTLEDGEATLIQKFYELIARYSPQLVSWNGGGFDLPVLHY HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH RGLVHGVTAPRYWEMGEGRDDDSRDFKWNNYISRYHMRHLDLMDLLAMYQPRASAPLDDL HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AKLCGFPGKMGMDGSKVWQAYREGQLDAIRAYCETDVVNTYLMYCRFQLMRGGLLPREFD HHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC LEMELVQESLAELPGEQWMEYLRAFRLKRLTPEDEEIE CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA