| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is ydiA [C]
Identifier: 73541554
GI number: 73541554
Start: 2041571
End: 2042476
Strand: Direct
Name: ydiA [C]
Synonym: Reut_A1865
Alternate gene names: 73541554
Gene position: 2041571-2042476 (Clockwise)
Preceding gene: 73541550
Following gene: 73541571
Centisome position: 53.63
GC content: 60.71
Gene sequence:
>906_bases ATGTCTGAGCCTGTCGCGCCGGACGGCGCCCAGCCGGCCCCTGCCGGTGCAACGCCCCAGCCTCTCCAGCCCATTGCGGG CGATCGCCCCGCCACCCGCACGGTTTTTATCGTCTCGGACGGTACCGGCATTACCGCCGAAACCTTCAGCCATTCGATCC TTGCGCAGTTCGAAATGCGCTTCCGCAAGGTACGCATGCCGTTCGTCGATACGCCTGAAAAGGCACATATCGCCGTCGGG AAGATCAATGAGGCTTTCCACACCGAAGGCGTGCCTCCCATCGTCTTCACCACGCTCGTCAACCAGGAAGCGAACAAGGC ACTGCGCCGCGCCAAGGCGATGATCCTGGATATGTTCCAGACCTTCATCGAACCGCTGGAAAAGGAACTTGGGCTCAAGT CGACGCATGCGATCGGCCGCTTCCACCAGAACGCGGACACCGAGGCGTACAAGAACCGCATCGAGGCCATCAATTTCTCG CTCGCGCATGATGACGGCCAGTCACACAAGAACCTCCAGGAAGCCGATGTGATCCTCGTTGGCGTCTCGCGCAGCGGCAA GACGCCGACCAGCCTCTACCTGGCCATGCAGTACGGCCTGAAAGCGGCGAACTATCCGCTGATCCCCGATGATTTCGAGC GCGGCAAGCTGCCAAAGGCGCTCTACGACTACAAGCCGAAGATTTTTGGCCTGTCGATCGACCCGCAGCGCCTCACGGAA ATCCGCAACGAGCGCCGCCCGGGCAGCAAATACGCCGCGATCGAGAACTGCCGCTACGAGGTCAACGAGGCCGAGGCCAT GATGCGACGGGAAGGCATCAAGTGGCTGTCCTCGACGCATAAGTCCATCGAGGAAATCGCGACGACGATCCTTCAGGAAA TCAAGGTCGACCGCGACAACTACTGA
Upstream 100 bases:
>100_bases GGCCCTGCAGAATTGCTTAGCGAAAAGATCGCCGCTATTCTACCGTGCTGCGCCGCACTTTTCTGCGGAACGTTGAATCT ATTTATTCTTCTGCCAGCCC
Downstream 100 bases:
>100_bases GCCGTACTGCCGTTACTGGGTGCCGCGGCGCTGCCGCACTGCCTCGAACAGGCAGATCGCGGTGGCGGCGCCCACATTCA GCGACTCCAGGCCGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSEPVAPDGAQPAPAGATPQPLQPIAGDRPATRTVFIVSDGTGITAETFSHSILAQFEMRFRKVRMPFVDTPEKAHIAVG KINEAFHTEGVPPIVFTTLVNQEANKALRRAKAMILDMFQTFIEPLEKELGLKSTHAIGRFHQNADTEAYKNRIEAINFS LAHDDGQSHKNLQEADVILVGVSRSGKTPTSLYLAMQYGLKAANYPLIPDDFERGKLPKALYDYKPKIFGLSIDPQRLTE IRNERRPGSKYAAIENCRYEVNEAEAMMRREGIKWLSSTHKSIEEIATTILQEIKVDRDNY
Sequences:
>Translated_301_residues MSEPVAPDGAQPAPAGATPQPLQPIAGDRPATRTVFIVSDGTGITAETFSHSILAQFEMRFRKVRMPFVDTPEKAHIAVG KINEAFHTEGVPPIVFTTLVNQEANKALRRAKAMILDMFQTFIEPLEKELGLKSTHAIGRFHQNADTEAYKNRIEAINFS LAHDDGQSHKNLQEADVILVGVSRSGKTPTSLYLAMQYGLKAANYPLIPDDFERGKLPKALYDYKPKIFGLSIDPQRLTE IRNERRPGSKYAAIENCRYEVNEAEAMMRREGIKWLSSTHKSIEEIATTILQEIKVDRDNY >Mature_300_residues SEPVAPDGAQPAPAGATPQPLQPIAGDRPATRTVFIVSDGTGITAETFSHSILAQFEMRFRKVRMPFVDTPEKAHIAVGK INEAFHTEGVPPIVFTTLVNQEANKALRRAKAMILDMFQTFIEPLEKELGLKSTHAIGRFHQNADTEAYKNRIEAINFSL AHDDGQSHKNLQEADVILVGVSRSGKTPTSLYLAMQYGLKAANYPLIPDDFERGKLPKALYDYKPKIFGLSIDPQRLTEI RNERRPGSKYAAIENCRYEVNEAEAMMRREGIKWLSSTHKSIEEIATTILQEIKVDRDNY
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family
Homologues:
Organism=Escherichia coli, GI1787995, Length=276, Percent_Identity=44.2028985507246, Blast_Score=247, Evalue=5e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1865_CUPPJ (Q470F3)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296074.1 - GeneID: 3609252 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A1865 - NMPDR: fig|264198.3.peg.2395 - HOGENOM: HBG304855 - OMA: DAINYAM - ProtClustDB: PRK05339 - BioCyc: REUT264198:REUT_A1865-MONOMER - HAMAP: MF_01062 - InterPro: IPR005177
Pfam domain/function: PF03618 DUF299
EC number: NA
Molecular weight: Translated: 33681; Mature: 33550
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVAPDGAQPAPAGATPQPLQPIAGDRPATRTVFIVSDGTGITAETFSHSILAQFEMR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH FRKVRMPFVDTPEKAHIAVGKINEAFHTEGVPPIVFTTLVNQEANKALRRAKAMILDMFQ HHHHCCCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFIEPLEKELGLKSTHAIGRFHQNADTEAYKNRIEAINFSLAHDDGQSHKNLQEADVILV HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEE GVSRSGKTPTSLYLAMQYGLKAANYPLIPDDFERGKLPKALYDYKPKIFGLSIDPQRLTE EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHH IRNERRPGSKYAAIENCRYEVNEAEAMMRREGIKWLSSTHKSIEEIATTILQEIKVDRDN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Y C >Mature Secondary Structure SEPVAPDGAQPAPAGATPQPLQPIAGDRPATRTVFIVSDGTGITAETFSHSILAQFEMR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH FRKVRMPFVDTPEKAHIAVGKINEAFHTEGVPPIVFTTLVNQEANKALRRAKAMILDMFQ HHHHCCCCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFIEPLEKELGLKSTHAIGRFHQNADTEAYKNRIEAINFSLAHDDGQSHKNLQEADVILV HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEE GVSRSGKTPTSLYLAMQYGLKAANYPLIPDDFERGKLPKALYDYKPKIFGLSIDPQRLTE EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHH IRNERRPGSKYAAIENCRYEVNEAEAMMRREGIKWLSSTHKSIEEIATTILQEIKVDRDN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA