| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541289
Identifier: 73541289
GI number: 73541289
Start: 1721550
End: 1722710
Strand: Direct
Name: 73541289
Synonym: Reut_A1599
Alternate gene names: NA
Gene position: 1721550-1722710 (Clockwise)
Preceding gene: 73541288
Following gene: 73541292
Centisome position: 45.23
GC content: 61.33
Gene sequence:
>1161_bases GTGAAAAGAAAGATTCTTGCCCTGGCTGCTGTCAGTGCGTGTGGGGCAGCGAGCGCGCAATCCGGCGTGACCTTGTATGG TGTGGCGGATATCAACGTAGAGTACGTCAACCGCGTCGGCGCCGCCGTGCCGTCGGCCGCCAACGGCTTCCAGTCGGGTG CCGGCCATAGCGTCGTCCGCGAGAATTCCGGCGGGTACTCCGGCTCGCGTTGGGGGCTTCGCGGCACGGAGGATCTGGGC GCCGGAATGAAGTCCATCTTCGTCCTGGAAAGCGGCTTCAATCTCGATAGTGGCGCGTCGCAGCAGGGCGGGCGTTTGTT TGGTCGCCAGGCCTTTGTGGGTCTTAGCTCCGAATATGGTCAGCTCACCTTCGGCCGGCAATACCATTCGATGTTCTCGA CGCTGGCCAACTTCATTCCGGCCCGATATGCGACCCAGTATGAACCCGTGGGCGTGATCGCCGGTGCGAATTTCCGCGAG GACAATGCGCTGAAGTACGTCGGCGTGTTCGGCGGCCTCACGGCACAGGCCAACATGTCGTTCGGCGTCGGGACGACACT GCCGCAAGTCATCGCAAGCGTTCCGGCCGCCGGCGGCAATGGCGAGGTGCCGGGGCAGTATCGCCGCGACACGGCCTATG GTGTTGGCTTGAGCTATCTCGCCGGGCCGTTCGGGGTAGGCGTTGCCTACGATCAATGGAATCCGACGATCGGCACTGGC AGCGGTACCTTCAAGAAGGCCGCGGTCATGGGCAGCTACGCTTTCAACGCCACGGCGAAAGTCATGGGCGGTTATCGCTG GGGCCAGAACAAGAACCAGAATGGCGGCCTGACCATGCGTGACGACTTCTATTGGGTCGGCGGTCAGTACCGGTTCTCTT CTGCACTCGACTTCACGCTCGAGTATGACTATCAGAACGTGAAGAGCCTCGGCGGCAATACGCACGTTGCCAATCCCTGG CAGGTTGCGCTGATTGCCGACTACACGCTCTCGAAGCGGACAGATATCTATCTGACCATGGCCTATGCCAAGAACGCCGG CCTGGCGATGGAATCGGCAGCGAGCAACTATGCCACCAGCCTGACAGTCAACAACTACGCGCTGTCCAATGGCCAGAGCT CGATGTTTGGCGCCGCTGTGGGTATCCGCCACGTGTTCTGA
Upstream 100 bases:
>100_bases GGGAAATCGACCCTCGATTCGCCCCCTCAAACGCTTCGACCTCTTGGCATTCGCGCGCCACCGGGTTGAAGACGACAACA ATGAACGTGGAGGAGTTCTG
Downstream 100 bases:
>100_bases AGGCGGCTCTGAAGAGCCTTCTGCATGAGTCTCCACCGGAAATGCCGATCTTCAGCCAGCCTGGCACTTTCCTCGGCACT TCCGGCTTCAAAGGTTCGAC
Product: putative outer membrane porin signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVRENSGGYSGSRWGLRGTEDLG AGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYGQLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFRE DNALKYVGVFGGLTAQANMSFGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTLEYDYQNVKSLGGNTHVANPW QVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATSLTVNNYALSNGQSSMFGAAVGIRHVF
Sequences:
>Translated_386_residues MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVRENSGGYSGSRWGLRGTEDLG AGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYGQLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFRE DNALKYVGVFGGLTAQANMSFGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTLEYDYQNVKSLGGNTHVANPW QVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATSLTVNNYALSNGQSSMFGAAVGIRHVF >Mature_386_residues MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVRENSGGYSGSRWGLRGTEDLG AGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYGQLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFRE DNALKYVGVFGGLTAQANMSFGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTLEYDYQNVKSLGGNTHVANPW QVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATSLTVNNYALSNGQSSMFGAAVGIRHVF
Specific function: Forms anion selective channels [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To bacterial outer membrane proteins and porins [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 - InterPro: IPR002299 [H]
Pfam domain/function: PF00267 Porin_1 [H]
EC number: NA
Molecular weight: Translated: 40682; Mature: 40682
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVR CCCEEEEEEHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEE ENSGGYSGSRWGLRGTEDLGAGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYG CCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCC QLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFREDNALKYVGVFGGLTAQANMS CEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEECCCC FGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCEEECCCCCCEECC SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTL CCCHHHHHEEECHHHCCHHHHHCCEECCCCCCCCCCEEEECCEEEECCEEEECCEEEEEE EYDYQNVKSLGGNTHVANPWQVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATS EECCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEHHCCCCCEEE LTVNNYALSNGQSSMFGAAVGIRHVF EEEECEEECCCCCHHHHHHHHHEECC >Mature Secondary Structure MKRKILALAAVSACGAASAQSGVTLYGVADINVEYVNRVGAAVPSAANGFQSGAGHSVVR CCCEEEEEEHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEE ENSGGYSGSRWGLRGTEDLGAGMKSIFVLESGFNLDSGASQQGGRLFGRQAFVGLSSEYG CCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEEECCCCCC QLTFGRQYHSMFSTLANFIPARYATQYEPVGVIAGANFREDNALKYVGVFGGLTAQANMS CEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEECCCC FGVGTTLPQVIASVPAAGGNGEVPGQYRRDTAYGVGLSYLAGPFGVGVAYDQWNPTIGTG CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCEEECCCCCCEECC SGTFKKAAVMGSYAFNATAKVMGGYRWGQNKNQNGGLTMRDDFYWVGGQYRFSSALDFTL CCCHHHHHEEECHHHCCHHHHHCCEECCCCCCCCCCEEEECCEEEECCEEEECCEEEEEE EYDYQNVKSLGGNTHVANPWQVALIADYTLSKRTDIYLTMAYAKNAGLAMESAASNYATS EECCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEHHCCCCCEEE LTVNNYALSNGQSSMFGAAVGIRHVF EEEECEEECCCCCHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1658537; 12910271 [H]