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The map label for this gene is uxuR [H]

Identifier: 73541002

GI number: 73541002

Start: 1403793

End: 1404515

Strand: Reverse

Name: uxuR [H]

Synonym: Reut_A1308

Alternate gene names: 73541002

Gene position: 1404515-1403793 (Counterclockwise)

Preceding gene: 73541003

Following gene: 73541001

Centisome position: 36.9

GC content: 66.67

Gene sequence:

>723_bases
ATGCGAACCCGCGCCGTCACCCTGACCGAACAGGTCACCCGTCAGCTACGTACCGACATCGAGAACGGGATCTATCCCAT
CGGAAGCCGTTTGCCCACAGGCAGGCAACTGGCTGATCAATACGGCGTCAGTGCCGCCGTGATCCGCGAGGTCACGGAGC
ACCTGCGCTCGCAAGGGCTGGTGGAAACCCGCCAGGGCGTGGGCTGCACCGTGCGCTCGCGCACCGGCTCCGCCGGCTTC
CAGCTGCCGCGAGAGCCCGATCTTGGCCGTACCGAATTGGCCGATCTGTACGACCTGCGCATCGACCTGGAAAGTGCGGC
CGCCGCACTGGCCGCGGTGCGCCGCACCGCAGAAGACCTGGACAGCCTTTCGCTGCTGCTGCAACGGCTGAAGATCCAAC
TCTATGATGCGCAGCAGGCGGTCGACCTCGATGCCGCTTTCCATATCGGCATCGCGACGGCCACGCATAACCCGTACTAC
CGGCAGTTGCTGCAGTACATGAACCTGCAGTTGCACCAGGCCGTTGCCGCGGCGCGCGCGAACACGCTGCAGCAGGCACG
CCTGCCCGAAGCCGTGCATTCGGAGCATGAAGCCATCTTCGAAGCGGTCCGCGACGGCAACGCCGCCGCGGCGCGCGAGG
CCACCACTCATCACCTGCAATGCGCGGCGCAGCGCCTGGGCCTGACCCTGCGCGCTCGCGCAGCTGCCGATTCCTTGCCC
TGA

Upstream 100 bases:

>100_bases
CACAGACTTGCTGCCGCCGGATACCCTGACGCAGTGATGATGGATTTAAGGGTTTACTCGTAGTTTTCAGATAACCTGCA
AACCCTATAATCGGCAGACC

Downstream 100 bases:

>100_bases
AAGCCATCGATCCCATGCAAGCCACCACCCTGCCCCAGCGCCTCGTCGAAGCCCTTGGCCCCGATACCGTACTTACGCAG
CCCGACGACATTGCGCCGTG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRTRAVTLTEQVTRQLRTDIENGIYPIGSRLPTGRQLADQYGVSAAVIREVTEHLRSQGLVETRQGVGCTVRSRTGSAGF
QLPREPDLGRTELADLYDLRIDLESAAAALAAVRRTAEDLDSLSLLLQRLKIQLYDAQQAVDLDAAFHIGIATATHNPYY
RQLLQYMNLQLHQAVAAARANTLQQARLPEAVHSEHEAIFEAVRDGNAAAAREATTHHLQCAAQRLGLTLRARAAADSLP

Sequences:

>Translated_240_residues
MRTRAVTLTEQVTRQLRTDIENGIYPIGSRLPTGRQLADQYGVSAAVIREVTEHLRSQGLVETRQGVGCTVRSRTGSAGF
QLPREPDLGRTELADLYDLRIDLESAAAALAAVRRTAEDLDSLSLLLQRLKIQLYDAQQAVDLDAAFHIGIATATHNPYY
RQLLQYMNLQLHQAVAAARANTLQQARLPEAVHSEHEAIFEAVRDGNAAAAREATTHHLQCAAQRLGLTLRARAAADSLP
>Mature_240_residues
MRTRAVTLTEQVTRQLRTDIENGIYPIGSRLPTGRQLADQYGVSAAVIREVTEHLRSQGLVETRQGVGCTVRSRTGSAGF
QLPREPDLGRTELADLYDLRIDLESAAAALAAVRRTAEDLDSLSLLLQRLKIQLYDAQQAVDLDAAFHIGIATATHNPYY
RQLLQYMNLQLHQAVAAARANTLQQARLPEAVHSEHEAIFEAVRDGNAAAAREATTHHLQCAAQRLGLTLRARAAADSLP

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786303, Length=226, Percent_Identity=32.3008849557522, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790032, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1790780, Length=231, Percent_Identity=31.1688311688312, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082208, Length=236, Percent_Identity=26.6949152542373, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI48994955, Length=223, Percent_Identity=26.9058295964126, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789353, Length=242, Percent_Identity=26.8595041322314, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26322; Mature: 26322

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRAVTLTEQVTRQLRTDIENGIYPIGSRLPTGRQLADQYGVSAAVIREVTEHLRSQGL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
VETRQGVGCTVRSRTGSAGFQLPREPDLGRTELADLYDLRIDLESAAAALAAVRRTAEDL
HHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLSLLLQRLKIQLYDAQQAVDLDAAFHIGIATATHNPYYRQLLQYMNLQLHQAVAAARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NTLQQARLPEAVHSEHEAIFEAVRDGNAAAAREATTHHLQCAAQRLGLTLRARAAADSLP
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure
MRTRAVTLTEQVTRQLRTDIENGIYPIGSRLPTGRQLADQYGVSAAVIREVTEHLRSQGL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
VETRQGVGCTVRSRTGSAGFQLPREPDLGRTELADLYDLRIDLESAAAALAAVRRTAEDL
HHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLSLLLQRLKIQLYDAQQAVDLDAAFHIGIATATHNPYYRQLLQYMNLQLHQAVAAARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NTLQQARLPEAVHSEHEAIFEAVRDGNAAAAREATTHHLQCAAQRLGLTLRARAAADSLP
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]