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The map label for this gene is glcD [C]

Identifier: 73541001

GI number: 73541001

Start: 1402366

End: 1403778

Strand: Reverse

Name: glcD [C]

Synonym: Reut_A1307

Alternate gene names: 73541001

Gene position: 1403778-1402366 (Counterclockwise)

Preceding gene: 73541002

Following gene: 73540996

Centisome position: 36.88

GC content: 65.11

Gene sequence:

>1413_bases
ATGCAAGCCACCACCCTGCCCCAGCGCCTCGTCGAAGCCCTTGGCCCCGATACCGTACTTACGCAGCCCGACGACATTGC
GCCGTGGCTGTCGGACTGGCGCGGCATCTATCGCGGCCAGGCACAGGCGGTGGTGCGGCCACGCACGGTCGACGAAGTCT
CGCGCTGCCTGGCACTGTGCCAGCAGGCCGCGGTACCGGTCGTGCCGCGCGGCGGCAACACTGGCCTGTGCGGTGCCGCT
ACGCCCGACAGCCAGCCGGAGAACGTGGTGCTGAGCCTGGACCGCATGCATGCGATCCGCTCGCTCGACACCATTGCCAA
CACCATGGTCGTCGAAGCCGGCTGCATTCTCGGCAACCTGCGCCGTGCCGCTGCCGAGGCCAACCGCCTGCTGCCGCTGA
GTCTTGCCGCAGAGGATTCCTGCCAGATCGGCGGCAACCTGGCCACCAATGCAGGCGGCGTCAATGTCGTGCGCTACGGC
ATGACGCGCGAACTGGTGCTCGGTGTCGAAGCCGTACTGCCGAATGGCGAAATCTTTCGTGGCCTGCGTGCACTGCGCAA
GGACAACACCGGCTATGACCTCAAGCAGTTGCTGATTGGTTCGGAAGGCACGCTTGGCGTGATCACCGCCGCAGCGCTGC
GCCTGTTCCCGCGCACGGACACACGCAGCGTCGTATTGGCGGCCGTCGAATCGCCGCAGCAGGCGCTGGAGCTCTATGCG
TTGCTGTTCGAGCAATGCGGCGCGCGGTTGCAGGCGTTCGAGTTCTTCACCGGGTCTTGCCTGGACCTGGTCCTTACCCA
TGCCGAAGGCGTGCACGAGCCGTTTGCGCAGCGCTACCCCGCTTACGTACTCGTAGAACTGGCCGACACCGCGGAAGAAG
CAGCCCTCAATGCGCTGCTGGAGCGCGTGATCGGCGACGCGCTGGAGCGCGGGTTGTGCCTTGACGCGGCCGTATCGGCC
TCGCTGGCACAACTGCAGGCGCTGTGGAAGTTGCGCGAGGAAATCTCGGAAGCGCAACGCGCGGACGGGCCGCACCTGAA
GCACGATGTGTCGCTGCCGATCGAACAGATCCCGACGTTCATGGTGTCGATGGAGGCACGGCTGCATAGGCTTGACCCGG
CGATCCGGCCATTCATCTTCGGGCACTTCGGCGACGGCAACCTGCACTACAACCTGTCACGTCCGCAAGGTGCGCCGAAG
GACTGGGCGGCAACGCATGAGGATGCCGTGACCGGCACCGTGCTCGATGAAGTCATGCGCTACGGCGGAAGCATCAGCGC
CGAGCATGGAATCGGCCAGCTCAAGCGCCATGCATTCCTGCAGTACAAGGATCCGCTGGAGCTGCGGCTGATGCGCGAAA
TCAAGCACGCATTCGATCCGGCCGGCATCATGAATCCTGGCAAGCTGCTCTGA

Upstream 100 bases:

>100_bases
AGGCCACCACTCATCACCTGCAATGCGCGGCGCAGCGCCTGGGCCTGACCCTGCGCGCTCGCGCAGCTGCCGATTCCTTG
CCCTGAAAGCCATCGATCCC

Downstream 100 bases:

>100_bases
CGCTGCGAGACGCCAATAAAAAACGCGCCTGAGTCGGCGCGTTTTTTGTCAGAGGAACCGCAGATCAGGTTCCGCGCGAT
GGCTGCGAAGCGAGGATTGC

Product: FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQATTLPQRLVEALGPDTVLTQPDDIAPWLSDWRGIYRGQAQAVVRPRTVDEVSRCLALCQQAAVPVVPRGGNTGLCGAA
TPDSQPENVVLSLDRMHAIRSLDTIANTMVVEAGCILGNLRRAAAEANRLLPLSLAAEDSCQIGGNLATNAGGVNVVRYG
MTRELVLGVEAVLPNGEIFRGLRALRKDNTGYDLKQLLIGSEGTLGVITAAALRLFPRTDTRSVVLAAVESPQQALELYA
LLFEQCGARLQAFEFFTGSCLDLVLTHAEGVHEPFAQRYPAYVLVELADTAEEAALNALLERVIGDALERGLCLDAAVSA
SLAQLQALWKLREEISEAQRADGPHLKHDVSLPIEQIPTFMVSMEARLHRLDPAIRPFIFGHFGDGNLHYNLSRPQGAPK
DWAATHEDAVTGTVLDEVMRYGGSISAEHGIGQLKRHAFLQYKDPLELRLMREIKHAFDPAGIMNPGKLL

Sequences:

>Translated_470_residues
MQATTLPQRLVEALGPDTVLTQPDDIAPWLSDWRGIYRGQAQAVVRPRTVDEVSRCLALCQQAAVPVVPRGGNTGLCGAA
TPDSQPENVVLSLDRMHAIRSLDTIANTMVVEAGCILGNLRRAAAEANRLLPLSLAAEDSCQIGGNLATNAGGVNVVRYG
MTRELVLGVEAVLPNGEIFRGLRALRKDNTGYDLKQLLIGSEGTLGVITAAALRLFPRTDTRSVVLAAVESPQQALELYA
LLFEQCGARLQAFEFFTGSCLDLVLTHAEGVHEPFAQRYPAYVLVELADTAEEAALNALLERVIGDALERGLCLDAAVSA
SLAQLQALWKLREEISEAQRADGPHLKHDVSLPIEQIPTFMVSMEARLHRLDPAIRPFIFGHFGDGNLHYNLSRPQGAPK
DWAATHEDAVTGTVLDEVMRYGGSISAEHGIGQLKRHAFLQYKDPLELRLMREIKHAFDPAGIMNPGKLL
>Mature_470_residues
MQATTLPQRLVEALGPDTVLTQPDDIAPWLSDWRGIYRGQAQAVVRPRTVDEVSRCLALCQQAAVPVVPRGGNTGLCGAA
TPDSQPENVVLSLDRMHAIRSLDTIANTMVVEAGCILGNLRRAAAEANRLLPLSLAAEDSCQIGGNLATNAGGVNVVRYG
MTRELVLGVEAVLPNGEIFRGLRALRKDNTGYDLKQLLIGSEGTLGVITAAALRLFPRTDTRSVVLAAVESPQQALELYA
LLFEQCGARLQAFEFFTGSCLDLVLTHAEGVHEPFAQRYPAYVLVELADTAEEAALNALLERVIGDALERGLCLDAAVSA
SLAQLQALWKLREEISEAQRADGPHLKHDVSLPIEQIPTFMVSMEARLHRLDPAIRPFIFGHFGDGNLHYNLSRPQGAPK
DWAATHEDAVTGTVLDEVMRYGGSISAEHGIGQLKRHAFLQYKDPLELRLMREIKHAFDPAGIMNPGKLL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=463, Percent_Identity=37.5809935205184, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI37595756, Length=436, Percent_Identity=31.1926605504587, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI37595754, Length=458, Percent_Identity=29.4759825327511, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI4501993, Length=185, Percent_Identity=28.6486486486486, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI1789351, Length=453, Percent_Identity=29.8013245033113, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI48994907, Length=496, Percent_Identity=24.3951612903226, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534361, Length=459, Percent_Identity=34.4226579520697, Blast_Score=263, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI71992373, Length=442, Percent_Identity=29.185520361991, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71992381, Length=479, Percent_Identity=28.39248434238, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71992392, Length=363, Percent_Identity=29.2011019283747, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=193, Percent_Identity=25.9067357512953, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320023, Length=457, Percent_Identity=35.6673960612691, Blast_Score=314, Evalue=2e-86,
Organism=Saccharomyces cerevisiae, GI6320764, Length=469, Percent_Identity=32.409381663113, Blast_Score=280, Evalue=3e-76,
Organism=Saccharomyces cerevisiae, GI6320027, Length=442, Percent_Identity=25.5656108597285, Blast_Score=140, Evalue=6e-34,
Organism=Drosophila melanogaster, GI18921117, Length=463, Percent_Identity=35.6371490280778, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24639277, Length=463, Percent_Identity=35.6371490280778, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24639275, Length=463, Percent_Identity=35.6371490280778, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24653753, Length=189, Percent_Identity=31.7460317460317, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51018; Mature: 51018

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATTLPQRLVEALGPDTVLTQPDDIAPWLSDWRGIYRGQAQAVVRPRTVDEVSRCLALC
CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHH
QQAAVPVVPRGGNTGLCGAATPDSQPENVVLSLDRMHAIRSLDTIANTMVVEAGCILGNL
HHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAAAEANRLLPLSLAAEDSCQIGGNLATNAGGVNVVRYGMTRELVLGVEAVLPNGEIFR
HHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHCCCHHHHH
GLRALRKDNTGYDLKQLLIGSEGTLGVITAAALRLFPRTDTRSVVLAAVESPQQALELYA
HHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHH
LLFEQCGARLQAFEFFTGSCLDLVLTHAEGVHEPFAQRYPAYVLVELADTAEEAALNALL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEHHHHHHHHHHHHH
ERVIGDALERGLCLDAAVSASLAQLQALWKLREEISEAQRADGPHLKHDVSLPIEQIPTF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
MVSMEARLHRLDPAIRPFIFGHFGDGNLHYNLSRPQGAPKDWAATHEDAVTGTVLDEVMR
HHHHHHHHHHHCHHHHCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
YGGSISAEHGIGQLKRHAFLQYKDPLELRLMREIKHAFDPAGIMNPGKLL
HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQATTLPQRLVEALGPDTVLTQPDDIAPWLSDWRGIYRGQAQAVVRPRTVDEVSRCLALC
CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHH
QQAAVPVVPRGGNTGLCGAATPDSQPENVVLSLDRMHAIRSLDTIANTMVVEAGCILGNL
HHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAAAEANRLLPLSLAAEDSCQIGGNLATNAGGVNVVRYGMTRELVLGVEAVLPNGEIFR
HHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHCCCHHHHH
GLRALRKDNTGYDLKQLLIGSEGTLGVITAAALRLFPRTDTRSVVLAAVESPQQALELYA
HHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHH
LLFEQCGARLQAFEFFTGSCLDLVLTHAEGVHEPFAQRYPAYVLVELADTAEEAALNALL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEHHHHHHHHHHHHH
ERVIGDALERGLCLDAAVSASLAQLQALWKLREEISEAQRADGPHLKHDVSLPIEQIPTF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
MVSMEARLHRLDPAIRPFIFGHFGDGNLHYNLSRPQGAPKDWAATHEDAVTGTVLDEVMR
HHHHHHHHHHHCHHHHCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
YGGSISAEHGIGQLKRHAFLQYKDPLELRLMREIKHAFDPAGIMNPGKLL
HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]