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The map label for this gene is yoaB [C]

Identifier: 73540968

GI number: 73540968

Start: 1357938

End: 1358300

Strand: Direct

Name: yoaB [C]

Synonym: Reut_A1273

Alternate gene names: 73540968

Gene position: 1357938-1358300 (Clockwise)

Preceding gene: 73540967

Following gene: 73540969

Centisome position: 35.67

GC content: 63.36

Gene sequence:

>363_bases
ATGAGCAGCAATGAACTGAAGCGCGCCCACGTGGGTGCACGCCTGTCGGAATACGCGGTGTACAACGGTGTGGTCTACCT
GGCTGGGCAAGTGCCGGAAGTGGAACCGAAGGCCGACATCAGCGGCCAGACCCGCGAGGTGCTGGGTCATATCGACCGGC
TGCTCGCCGAAGCGGGCAGCGACAAGACGCGCATCCTGTCATGCCAGATCTTCCTGACTGACATCGGGATGATCGGCAAG
ATGAACGAGGTGTGGGACGCGTGGGTGCCGCAGGGCAATACGCCGCCGCGCGCCACCGTCGAAGCCAGGCTGGCCAATCC
CGACTACCTGATCGAAGTGGTGGTGACCGCTGCGCTCAACTGA

Upstream 100 bases:

>100_bases
CGGCGCAGATTGCCGTGGCGCGCCAGTTCTTTCTCGGAAGCGCGTGAGGCGAGTGGCGCCTGAAATCGTTCGTATCAACC
AGAAATCGTTTTAACTAGTC

Downstream 100 bases:

>100_bases
AGATGGCGTTGTGACATGGTGACCCTATGGTGACGTCCACCGACTTGGCCGGCCAGGTGGCCGGCGTCCCGGACGCCGAC
ATGGTCGAGCGCGCGCTCGC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSSNELKRAHVGARLSEYAVYNGVVYLAGQVPEVEPKADISGQTREVLGHIDRLLAEAGSDKTRILSCQIFLTDIGMIGK
MNEVWDAWVPQGNTPPRATVEARLANPDYLIEVVVTAALN

Sequences:

>Translated_120_residues
MSSNELKRAHVGARLSEYAVYNGVVYLAGQVPEVEPKADISGQTREVLGHIDRLLAEAGSDKTRILSCQIFLTDIGMIGK
MNEVWDAWVPQGNTPPRATVEARLANPDYLIEVVVTAALN
>Mature_119_residues
SSNELKRAHVGARLSEYAVYNGVVYLAGQVPEVEPKADISGQTREVLGHIDRLLAEAGSDKTRILSCQIFLTDIGMIGKM
NEVWDAWVPQGNTPPRATVEARLANPDYLIEVVVTAALN

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=112, Percent_Identity=41.9642857142857, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13092; Mature: 12961

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNELKRAHVGARLSEYAVYNGVVYLAGQVPEVEPKADISGQTREVLGHIDRLLAEAGS
CCCCHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
DKTRILSCQIFLTDIGMIGKMNEVWDAWVPQGNTPPRATVEARLANPDYLIEVVVTAALN
CCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SSNELKRAHVGARLSEYAVYNGVVYLAGQVPEVEPKADISGQTREVLGHIDRLLAEAGS
CCCHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
DKTRILSCQIFLTDIGMIGKMNEVWDAWVPQGNTPPRATVEARLANPDYLIEVVVTAALN
CCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA