Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 73540967

GI number: 73540967

Start: 1357000

End: 1357884

Strand: Direct

Name: ybfF [C]

Synonym: Reut_A1272

Alternate gene names: 73540967

Gene position: 1357000-1357884 (Clockwise)

Preceding gene: 73540965

Following gene: 73540968

Centisome position: 35.65

GC content: 65.88

Gene sequence:

>885_bases
ATGTCTGCCAGTCCGCGCCTCGGCTTCGTTCAGTGCATCAGTCCGGCGGGCCTGCACCGCATGGCCTATCACGAATGGGG
CGACCCGGCGAATCCGCGCGTGCTGATGTGCGTGCACGGCCTGACGCGCACCGGCCGCGATTTCGATGCGCTGGCCCAGT
CGCTGTGCGGCGACTACCGCGTGGTGTGCCCCGACGTGGCTGGCCGCGGGCGCTCGGACTGGCTGCTTGATCCGTCCGGT
TACGTGGTGCCCAAGTACGTGGCGGACATGGTTACGCTGATCGCCAGGCTCAACGTCGACAAGGTCGACTGGTTCGGCAC
GTCAATGGGCGGGCTGATCGGCATGGCGCTGGCGGGCCTGCCCAATTCGCCGGTGCGCAAGCTGCTGCTCAACGATGTGG
GGCCGCGCATCACGGCTGCGGCCGTGGAGCGGATCGGCTCGTACGTTGGACTCCCGGTGCGGTTCAAGACCTTCGAAGAA
GGGCTGGCCTACCTGCAGACCATCAGCGCATCGTTCGGACGCCATACGCCGGAGCAATGGCGCGAGCTCAACGCTGCGAT
CCTCAAGCCTGTACAGGGTGCGCAAGGCCTGGAATGGGGCTTGCATTACGATCCTGCGCTGGCCGTACCGTTCCGCGGCG
CCACGCCGGAGCAACTCGCAGCCGGCGAAGCCACGATGTGGCAACTGTTCGAGGCCATTGAAGCGCCGGTGCTGGTCGTT
CGCGGTGCGCAGTCGGACCTGCTGTTGCGCGATACCGTGGCCGACATGGTGTCCCGCGGCAAACATGTCAGTTCGGTGGA
GATCCCCGATGTGGGGCATGCACCGACTTTTGTCAATCCGGCGCAGATTGCCGTGGCGCGCCAGTTCTTTCTCGGAAGCG
CGTGA

Upstream 100 bases:

>100_bases
TGGACTAGTGCTGTGGCATTGTAACCGCTGCGGCGTACAATCCTGCTTTGCTCAACCTCCGGCAATGCTTGTGCGGCAGC
CGGTTCGTCAGGGAGTTCAG

Downstream 100 bases:

>100_bases
GGCGAGTGGCGCCTGAAATCGTTCGTATCAACCAGAAATCGTTTTAACTAGTCATGAGCAGCAATGAACTGAAGCGCGCC
CACGTGGGTGCACGCCTGTC

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYRVVCPDVAGRGRSDWLLDPSG
YVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGLPNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEE
GLAYLQTISASFGRHTPEQWRELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV
RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA

Sequences:

>Translated_294_residues
MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYRVVCPDVAGRGRSDWLLDPSG
YVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGLPNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEE
GLAYLQTISASFGRHTPEQWRELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV
RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA
>Mature_293_residues
SASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYRVVCPDVAGRGRSDWLLDPSGY
VVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGLPNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEEG
LAYLQTISASFGRHTPEQWRELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVVR
GAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31774; Mature: 31643

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYR
CCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCE
VVCPDVAGRGRSDWLLDPSGYVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGL
EECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCC
PNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEEGLAYLQTISASFGRHTPEQW
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH
RELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV
HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCEEEE
RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA
ECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYR
CCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCE
VVCPDVAGRGRSDWLLDPSGYVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGL
EECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCC
PNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEEGLAYLQTISASFGRHTPEQW
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH
RELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV
HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCEEEE
RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA
ECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA