| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is ybfF [C]
Identifier: 73540967
GI number: 73540967
Start: 1357000
End: 1357884
Strand: Direct
Name: ybfF [C]
Synonym: Reut_A1272
Alternate gene names: 73540967
Gene position: 1357000-1357884 (Clockwise)
Preceding gene: 73540965
Following gene: 73540968
Centisome position: 35.65
GC content: 65.88
Gene sequence:
>885_bases ATGTCTGCCAGTCCGCGCCTCGGCTTCGTTCAGTGCATCAGTCCGGCGGGCCTGCACCGCATGGCCTATCACGAATGGGG CGACCCGGCGAATCCGCGCGTGCTGATGTGCGTGCACGGCCTGACGCGCACCGGCCGCGATTTCGATGCGCTGGCCCAGT CGCTGTGCGGCGACTACCGCGTGGTGTGCCCCGACGTGGCTGGCCGCGGGCGCTCGGACTGGCTGCTTGATCCGTCCGGT TACGTGGTGCCCAAGTACGTGGCGGACATGGTTACGCTGATCGCCAGGCTCAACGTCGACAAGGTCGACTGGTTCGGCAC GTCAATGGGCGGGCTGATCGGCATGGCGCTGGCGGGCCTGCCCAATTCGCCGGTGCGCAAGCTGCTGCTCAACGATGTGG GGCCGCGCATCACGGCTGCGGCCGTGGAGCGGATCGGCTCGTACGTTGGACTCCCGGTGCGGTTCAAGACCTTCGAAGAA GGGCTGGCCTACCTGCAGACCATCAGCGCATCGTTCGGACGCCATACGCCGGAGCAATGGCGCGAGCTCAACGCTGCGAT CCTCAAGCCTGTACAGGGTGCGCAAGGCCTGGAATGGGGCTTGCATTACGATCCTGCGCTGGCCGTACCGTTCCGCGGCG CCACGCCGGAGCAACTCGCAGCCGGCGAAGCCACGATGTGGCAACTGTTCGAGGCCATTGAAGCGCCGGTGCTGGTCGTT CGCGGTGCGCAGTCGGACCTGCTGTTGCGCGATACCGTGGCCGACATGGTGTCCCGCGGCAAACATGTCAGTTCGGTGGA GATCCCCGATGTGGGGCATGCACCGACTTTTGTCAATCCGGCGCAGATTGCCGTGGCGCGCCAGTTCTTTCTCGGAAGCG CGTGA
Upstream 100 bases:
>100_bases TGGACTAGTGCTGTGGCATTGTAACCGCTGCGGCGTACAATCCTGCTTTGCTCAACCTCCGGCAATGCTTGTGCGGCAGC CGGTTCGTCAGGGAGTTCAG
Downstream 100 bases:
>100_bases GGCGAGTGGCGCCTGAAATCGTTCGTATCAACCAGAAATCGTTTTAACTAGTCATGAGCAGCAATGAACTGAAGCGCGCC CACGTGGGTGCACGCCTGTC
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYRVVCPDVAGRGRSDWLLDPSG YVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGLPNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEE GLAYLQTISASFGRHTPEQWRELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA
Sequences:
>Translated_294_residues MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYRVVCPDVAGRGRSDWLLDPSG YVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGLPNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEE GLAYLQTISASFGRHTPEQWRELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA >Mature_293_residues SASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYRVVCPDVAGRGRSDWLLDPSGY VVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGLPNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEEG LAYLQTISASFGRHTPEQWRELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVVR GAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.-.- [C]
Molecular weight: Translated: 31774; Mature: 31643
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYR CCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCE VVCPDVAGRGRSDWLLDPSGYVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGL EECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCC PNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEEGLAYLQTISASFGRHTPEQW CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH RELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCEEEE RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA ECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLMCVHGLTRTGRDFDALAQSLCGDYR CCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCE VVCPDVAGRGRSDWLLDPSGYVVPKYVADMVTLIARLNVDKVDWFGTSMGGLIGMALAGL EECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCC PNSPVRKLLLNDVGPRITAAAVERIGSYVGLPVRFKTFEEGLAYLQTISASFGRHTPEQW CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH RELNAAILKPVQGAQGLEWGLHYDPALAVPFRGATPEQLAAGEATMWQLFEAIEAPVLVV HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCEEEE RGAQSDLLLRDTVADMVSRGKHVSSVEIPDVGHAPTFVNPAQIAVARQFFLGSA ECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA