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The map label for this gene is lpsJ [H]

Identifier: 73540965

GI number: 73540965

Start: 1355320

End: 1355958

Strand: Direct

Name: lpsJ [H]

Synonym: Reut_A1270

Alternate gene names: 73540965

Gene position: 1355320-1355958 (Clockwise)

Preceding gene: 73540964

Following gene: 73540967

Centisome position: 35.61

GC content: 64.63

Gene sequence:

>639_bases
ATGGCATGGACACGTGACGAAATGGCCGCGCGCGCCGCGGCGGAGCTGCAGGACGGCTTCTATGTGAACCTGGGTATCGG
CCTGCCGACGCTGGTGGCCAACTGGGTGCCGGAAGGCATGGAAGTGTGGCTGCAGTCGGAAAACGGCCTGCTCGGCATCG
GCCCGTTCCCGACCGAGGACGAAGTCGACGCCGACATGATCAACGCCGGCAAGCAGACCGTGACGACGCTGCCTGGCTCT
TCGATCTTCTCGTCGGCCGATTCCTTCGCGATGATCCGCGGCGGCCACATCAACCTGGCCATCCTCGGCGCGATGCAGGT
CAGCGAAAAGGGCGACCTCGCCAACTGGATGATCCCGGGCAAGATGGTCAAGGGCATGGGCGGCGCGATGGATCTGGTTG
CCGGCGTGGGCCGCGTGGTGGTGCTGATGGAACACACCGCCAAGAAGAAGGACGGCACCGAGGACATCAAGATCCTGAAG
GACTGCAACCTGCCGCTGACCGGCGTAGGCGTGGTCAACCGCATCATCACCGACCTCGGTGTGATCGACGTGACCTCGGA
CGGCCTGAAGCTCGTGGAAACCGCCCCGGGCGTGAGCCGCGAGGAAATCCAGAGCAAGACCGGCGCGACGCTGCTGTAA

Upstream 100 bases:

>100_bases
TGGCTGGCATCTTCGTCAAGCGCCTCGTGCTCAACACGACCCCCGAAAAACGCATCGAGCAGCGCACCGTGCGTGCCGCC
AAGTAAGAGGGAGACACATC

Downstream 100 bases:

>100_bases
GCGCTGCAGGTCGGATGCAAAAAGCCCCGCTGTGAAGCGGGGCTTTTTCATTCCTGCATGGGTTGGCTTTACTGGGCGAC
CCAGCCGCCGTCCATGTTCC

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MAWTRDEMAARAAAELQDGFYVNLGIGLPTLVANWVPEGMEVWLQSENGLLGIGPFPTEDEVDADMINAGKQTVTTLPGS
SIFSSADSFAMIRGGHINLAILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVGRVVVLMEHTAKKKDGTEDIKILK
DCNLPLTGVGVVNRIITDLGVIDVTSDGLKLVETAPGVSREEIQSKTGATLL

Sequences:

>Translated_212_residues
MAWTRDEMAARAAAELQDGFYVNLGIGLPTLVANWVPEGMEVWLQSENGLLGIGPFPTEDEVDADMINAGKQTVTTLPGS
SIFSSADSFAMIRGGHINLAILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVGRVVVLMEHTAKKKDGTEDIKILK
DCNLPLTGVGVVNRIITDLGVIDVTSDGLKLVETAPGVSREEIQSKTGATLL
>Mature_211_residues
AWTRDEMAARAAAELQDGFYVNLGIGLPTLVANWVPEGMEVWLQSENGLLGIGPFPTEDEVDADMINAGKQTVTTLPGSS
IFSSADSFAMIRGGHINLAILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVGRVVVLMEHTAKKKDGTEDIKILKD
CNLPLTGVGVVNRIITDLGVIDVTSDGLKLVETAPGVSREEIQSKTGATLL

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=209, Percent_Identity=57.4162679425837, Blast_Score=238, Evalue=2e-63,
Organism=Homo sapiens, GI11545841, Length=209, Percent_Identity=58.8516746411483, Blast_Score=234, Evalue=4e-62,
Organism=Escherichia coli, GI1788552, Length=207, Percent_Identity=49.7584541062802, Blast_Score=200, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17531517, Length=210, Percent_Identity=54.7619047619048, Blast_Score=232, Evalue=1e-61,
Organism=Drosophila melanogaster, GI21358325, Length=209, Percent_Identity=58.3732057416268, Blast_Score=244, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24655794, Length=209, Percent_Identity=58.3732057416268, Blast_Score=244, Evalue=3e-65,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22366; Mature: 22235

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01274 COA_TRANSF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTRDEMAARAAAELQDGFYVNLGIGLPTLVANWVPEGMEVWLQSENGLLGIGPFPTED
CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCC
EVDADMINAGKQTVTTLPGSSIFSSADSFAMIRGGHINLAILGAMQVSEKGDLANWMIPG
CCCHHHHHCCCCEEEECCCCHHHHCCCCEEEEECCCEEEEEEEEEEECCCCCCCCEECCH
KMVKGMGGAMDLVAGVGRVVVLMEHTAKKKDGTEDIKILKDCNLPLTGVGVVNRIITDLG
HHHHCCCHHHHHHHHHHHEEEEEEHHCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHCC
VIDVTSDGLKLVETAPGVSREEIQSKTGATLL
EEEECCCCCEEEECCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
AWTRDEMAARAAAELQDGFYVNLGIGLPTLVANWVPEGMEVWLQSENGLLGIGPFPTED
CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCC
EVDADMINAGKQTVTTLPGSSIFSSADSFAMIRGGHINLAILGAMQVSEKGDLANWMIPG
CCCHHHHHCCCCEEEECCCCHHHHCCCCEEEEECCCEEEEEEEEEEECCCCCCCCEECCH
KMVKGMGGAMDLVAGVGRVVVLMEHTAKKKDGTEDIKILKDCNLPLTGVGVVNRIITDLG
HHHHCCCHHHHHHHHHHHEEEEEEHHCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHCC
VIDVTSDGLKLVETAPGVSREEIQSKTGATLL
EEEECCCCCEEEECCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]