| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is aroC
Identifier: 73540952
GI number: 73540952
Start: 1342028
End: 1343140
Strand: Direct
Name: aroC
Synonym: Reut_A1257
Alternate gene names: 73540952
Gene position: 1342028-1343140 (Clockwise)
Preceding gene: 73540951
Following gene: 73540953
Centisome position: 35.26
GC content: 67.83
Gene sequence:
>1113_bases ATGTCCGGCAATACCCTTGGCCTGCTCTTCACTGTCACCACCTTCGGCGAATCGCACGGGCCCGCCATCGGCGCGGTGGT GGACGGTTGCCCGCCGGGCATGGATCTGACCGAGGCGGATATTCAGGGCGACCTGGACCGCCGCAAGCCGGGCACCTCGC GGCACGTCACGCAACGCAAGGAACCGGACCAGGTCGAGATCCTGTCGGGCGTGTTCGAAGGCAAGACCACGGGCACGCCG ATCTGCCTGCTGATCCGCAACACCGACCAGCGCAGCAAGGACTACGGGAATATCGTCGAGACGTTCCGTCCCGGGCATGC CGACTACACCTACTGGCAGAAGTACGGCATCCGCGACTATCGCGGCGGCGGCCGCTCGTCGGCCCGCCTGACCGCACCGG TCGTGGCGGCGGGCGCCGTGGCCAAGAAGTGGCTGCGCGAGCAGTTCGGCACGGAAATCCGCGGCTATATGTCGAAGCTG GGCGAGATCGAGGTGCCGTTCAGCGACTGGTCGCATGTGCCCGAGAACCCGTTCTTCGCCGCCAATGCGGACATCGTTCC GGAACTCGAAACCTATATGGACGCGCTGCGCCGCGACGGCGATTCGGTCGGCGCGCGCATCGAAGTTGTTGCCAGCAATG TGCCAGTGGGCCTTGGCGAGCCGCTGTTCGATCGCCTCGATGCCGATATCGCGCATGCGATGATGGGCCTCAACGCGGTC AAGGGCGTGGAGATTGGCGCCGGCTTCAAGAGCGTGGAGCAGCGCGGCAGCGAACACGGCGACGAGCTTACCGCGCAGGG CTTCCGAGGCAACAACGCAGGCGGCATCCTCGGCGGCATTTCCACGGGCCAGGACATCACCGTGTCGCTGGCGATCAAGC CGACCTCCAGCATCCGCACGCCGCGCGAGTCGATCGACAAGGCCGGCAATGCCGCGACGGTCGAGACCTTCGGCCGCCAC GATCCGTGCGTGGGCATCCGCGCGACGCCGATCGCCGAGGCGCTGCTCGCGCTCGTGCTGGTCGACCACGCGCTGCGCCA CCGCGCGCAGTGCGGCGACGTCAAGGTGGACACGCCGCGCATCCCCGCGCAGGCCCCTGGCCAGCCCGGCTGA
Upstream 100 bases:
>100_bases CAGCGGCGACCTGTCGCGCCGCTGAGCGGCAAGCGGGCGCAGAACCGGCGGCAATGGCCTTACAATGTAGGCCGTCCCCA ATTTCTGTGCGGTTTCCATC
Downstream 100 bases:
>100_bases GTTGGCCGCGGCGCCCGAGACCGTCAGCGCCGTTCCGGCGCGGCCCGAATATGGCCGCTTCGGTCTCTTCTACCTGGGGT ACTACGGCTACGTCGGCGTG
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSGNTLGLLFTVTTFGESHGPAIGAVVDGCPPGMDLTEADIQGDLDRRKPGTSRHVTQRKEPDQVEILSGVFEGKTTGTP ICLLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPVVAAGAVAKKWLREQFGTEIRGYMSKL GEIEVPFSDWSHVPENPFFAANADIVPELETYMDALRRDGDSVGARIEVVASNVPVGLGEPLFDRLDADIAHAMMGLNAV KGVEIGAGFKSVEQRGSEHGDELTAQGFRGNNAGGILGGISTGQDITVSLAIKPTSSIRTPRESIDKAGNAATVETFGRH DPCVGIRATPIAEALLALVLVDHALRHRAQCGDVKVDTPRIPAQAPGQPG
Sequences:
>Translated_370_residues MSGNTLGLLFTVTTFGESHGPAIGAVVDGCPPGMDLTEADIQGDLDRRKPGTSRHVTQRKEPDQVEILSGVFEGKTTGTP ICLLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPVVAAGAVAKKWLREQFGTEIRGYMSKL GEIEVPFSDWSHVPENPFFAANADIVPELETYMDALRRDGDSVGARIEVVASNVPVGLGEPLFDRLDADIAHAMMGLNAV KGVEIGAGFKSVEQRGSEHGDELTAQGFRGNNAGGILGGISTGQDITVSLAIKPTSSIRTPRESIDKAGNAATVETFGRH DPCVGIRATPIAEALLALVLVDHALRHRAQCGDVKVDTPRIPAQAPGQPG >Mature_369_residues SGNTLGLLFTVTTFGESHGPAIGAVVDGCPPGMDLTEADIQGDLDRRKPGTSRHVTQRKEPDQVEILSGVFEGKTTGTPI CLLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPVVAAGAVAKKWLREQFGTEIRGYMSKLG EIEVPFSDWSHVPENPFFAANADIVPELETYMDALRRDGDSVGARIEVVASNVPVGLGEPLFDRLDADIAHAMMGLNAVK GVEIGAGFKSVEQRGSEHGDELTAQGFRGNNAGGILGGISTGQDITVSLAIKPTSSIRTPRESIDKAGNAATVETFGRHD PCVGIRATPIAEALLALVLVDHALRHRAQCGDVKVDTPRIPAQAPGQPG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=360, Percent_Identity=65.8333333333333, Blast_Score=467, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=42.7792915531335, Blast_Score=285, Evalue=9e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_CUPPJ (Q472Q5)
Other databases:
- EMBL: CP000090 - RefSeq: YP_295472.1 - HSSP: P63611 - ProteinModelPortal: Q472Q5 - SMR: Q472Q5 - GeneID: 3609149 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A1257 - NMPDR: fig|264198.3.peg.1904 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - BioCyc: REUT264198:REUT_A1257-MONOMER - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 39511; Mature: 39380
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTLGLLFTVTTFGESHGPAIGAVVDGCPPGMDLTEADIQGDLDRRKPGTSRHVTQRK CCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCC EPDQVEILSGVFEGKTTGTPICLLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDY CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPVVAAGAVAKKWLREQFGTEIRGYMSKLGEIEVPFSDWSHVPENPFFA CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEECCCCCCCCCCCCCCEE ANADIVPELETYMDALRRDGDSVGARIEVVASNVPVGLGEPLFDRLDADIAHAMMGLNAV CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFKSVEQRGSEHGDELTAQGFRGNNAGGILGGISTGQDITVSLAIKPTSSIRT CCCEECCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCEEEEEEECCCHHCCC PRESIDKAGNAATVETFGRHDPCVGIRATPIAEALLALVLVDHALRHRAQCGDVKVDTPR CHHHHHHCCCCEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC IPAQAPGQPG CCCCCCCCCC >Mature Secondary Structure SGNTLGLLFTVTTFGESHGPAIGAVVDGCPPGMDLTEADIQGDLDRRKPGTSRHVTQRK CCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCC EPDQVEILSGVFEGKTTGTPICLLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDY CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPVVAAGAVAKKWLREQFGTEIRGYMSKLGEIEVPFSDWSHVPENPFFA CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEECCCCCCCCCCCCCCEE ANADIVPELETYMDALRRDGDSVGARIEVVASNVPVGLGEPLFDRLDADIAHAMMGLNAV CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFKSVEQRGSEHGDELTAQGFRGNNAGGILGGISTGQDITVSLAIKPTSSIRT CCCEECCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCEEEEEEECCCHHCCC PRESIDKAGNAATVETFGRHDPCVGIRATPIAEALLALVLVDHALRHRAQCGDVKVDTPR CHHHHHHCCCCEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC IPAQAPGQPG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA