| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540484
Identifier: 73540484
GI number: 73540484
Start: 850467
End: 851009
Strand: Reverse
Name: 73540484
Synonym: Reut_A0780
Alternate gene names: NA
Gene position: 851009-850467 (Counterclockwise)
Preceding gene: 73540485
Following gene: 73540483
Centisome position: 22.36
GC content: 64.46
Gene sequence:
>543_bases ATGTTTGCCGCGACGCTTCTGCTGCTCGCGGTTCTCACCGCAACTGCCACGTTGCAATTCCTGCTATCCAGCCGCCAGCT TGCCGGCTTGCAGCTTGACCGGGAAATCGCATTCCGCGCCGCTGAAGTAGCGTTGCTCGACGGCGAGGCCGATCTGATGG CAGCCATGGCGGGCAACGGTCCGCCAGACCGCCTTGATCCCGTTCCGGCAAGCGGGGCGTGCGGCCGAGGCATGCAGGCC GGAATCTGCGTGCCTGCCACCGGCAGCCTGCCCGTCTGGCAAGCATGGCTGTCAGGCACGGCGTCCGCCGATGACATAGG CGTGCCGTTTGGCACTTTCACCGGAAAGACAATGCCAGTTTTGCCCCAAGGTATCGCTGGCACGACAATTCCGCCGCGCT ACATTGCCGAGTGGGTTGGCGATGGCGCTGCGCCCATGGAATACGGCCGGCAGACTGCGATGCCGCGCCTTCGCGTCACC GCCATTGGCTTCGGCCGCAACCGCGACATCACTGCTGTGGTCCAGAGCGTGATTCAGCCATGA
Upstream 100 bases:
>100_bases TCGCGACGACGGTCCGCCTGCGGAACGCCCCTCGGTGTCAGGAGACATTGTGCTAGCCACACACAAGCCCGGCCCTCGCC CACATGGAGGTGCGACGCTG
Downstream 100 bases:
>100_bases GCCGGCAGCACGTCAACACCTGGGTCCTGGCCTGGCTGCTTTCGTCAGCCTCGGCGGCCGCGTGGGCCGGGATCGTCGAC CAACCCGCCGGCAATCTCCC
Product: signal peptide protein
Products: NA
Alternate protein names: Transmembrane Protein; Type IV Pilus Assembly Protein PilX
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MFAATLLLLAVLTATATLQFLLSSRQLAGLQLDREIAFRAAEVALLDGEADLMAAMAGNGPPDRLDPVPASGACGRGMQA GICVPATGSLPVWQAWLSGTASADDIGVPFGTFTGKTMPVLPQGIAGTTIPPRYIAEWVGDGAAPMEYGRQTAMPRLRVT AIGFGRNRDITAVVQSVIQP
Sequences:
>Translated_180_residues MFAATLLLLAVLTATATLQFLLSSRQLAGLQLDREIAFRAAEVALLDGEADLMAAMAGNGPPDRLDPVPASGACGRGMQA GICVPATGSLPVWQAWLSGTASADDIGVPFGTFTGKTMPVLPQGIAGTTIPPRYIAEWVGDGAAPMEYGRQTAMPRLRVT AIGFGRNRDITAVVQSVIQP >Mature_180_residues MFAATLLLLAVLTATATLQFLLSSRQLAGLQLDREIAFRAAEVALLDGEADLMAAMAGNGPPDRLDPVPASGACGRGMQA GICVPATGSLPVWQAWLSGTASADDIGVPFGTFTGKTMPVLPQGIAGTTIPPRYIAEWVGDGAAPMEYGRQTAMPRLRVT AIGFGRNRDITAVVQSVIQP
Specific function: Unknown
COG id: COG4726
COG function: function code NU; Tfp pilus assembly protein PilX
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18694; Mature: 18694
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAATLLLLAVLTATATLQFLLSSRQLAGLQLDREIAFRAAEVALLDGEADLMAAMAGNG CHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHEEEECCCHHHHHHHHCCC PPDRLDPVPASGACGRGMQAGICVPATGSLPVWQAWLSGTASADDIGVPFGTFTGKTMPV CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC LPQGIAGTTIPPRYIAEWVGDGAAPMEYGRQTAMPRLRVTAIGFGRNRDITAVVQSVIQP CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure MFAATLLLLAVLTATATLQFLLSSRQLAGLQLDREIAFRAAEVALLDGEADLMAAMAGNG CHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHEEEECCCHHHHHHHHCCC PPDRLDPVPASGACGRGMQAGICVPATGSLPVWQAWLSGTASADDIGVPFGTFTGKTMPV CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC LPQGIAGTTIPPRYIAEWVGDGAAPMEYGRQTAMPRLRVTAIGFGRNRDITAVVQSVIQP CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA