| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540483
Identifier: 73540483
GI number: 73540483
Start: 848635
End: 850470
Strand: Reverse
Name: 73540483
Synonym: Reut_A0779
Alternate gene names: NA
Gene position: 850470-848635 (Counterclockwise)
Preceding gene: 73540484
Following gene: 73540482
Centisome position: 22.34
GC content: 67.48
Gene sequence:
>1836_bases ATGAGCCGGCAGCACGTCAACACCTGGGTCCTGGCCTGGCTGCTTTCGTCAGCCTCGGCGGCCGCGTGGGCCGGGATCGT CGACCAACCCGCCGGCAATCTCCCGCTGACATACCTCGCGCAGGCTGGCGCCTACCCATGGACCGGCCGCCTGCGCGCGC TCGCCTGGAATCCCCAGCTGGCGAGAACGTCGGAACCGACACCTCACACCACCATGTGGGAAGCCGGCGCACGGCTCGAC ACTAACGCGACTGCGTCACGGCATCTCTACACGTCGGTCGCGCCCGCTGGCATGGAGTCGGAACGCCTTGTTCCGTTGCA GTGGTCCGCACTCGATGCAGCCAGTCAGCAGTCAATGGCCGACGGCACTAGTACCGCAGCATCCGGTGCGGACAAACTGG CGTGGTTGCGAGGCGAACGCGGCAACGCCGCATTGCGCCCGCGCGAAACCCGCCTGGCCGATGCCCGCGGTGCGCGCGTA CTGGTGGTGCCGCCGCCCGTCTGGCAACCGGGGAAAGCCGGCCATGCCGCGTTCCGCGAACGCCATCGCAATCGCCCGCA CACGGTCTGGCTCGGCACCACGGACGCATGGCTTCACGGATTCAGCGCCACCACTGGAGACGAGCTTGTCGGCTACATGC CACGAGCCTTGCTGCCGCTGGCAGCTGTAATGACTGCGCCGAAGGGCGCGCTGGCGCCGGTACCGTGTCCGCGGCCGGAA GCCGCCGATGTCGTCATGCATCGCGAATGGCGCACCGTGTTGCTCTGTGGTATCCCTGCCGCGAACGAGGGCGGCAGCAC GGCCGGTGCATTCGTGCTGGACATCAGCAATGCGGCGGATGTCGCACCAGTCCGCCTGATCTGGGAACTCACTGCAACGC CTGCGCTGCCACTGTCCGCCCGCGGTCCGGTTCGCGCGGCCGCGTTTGTCTACGACGAAGGGCCTCGTTGGTTCGCTGTC ACCACGGTGGACGCCGGCGCATCCCGTGCAGGCCTGGCACTGATCCCTCTGGAGAAAACGGCTGGCCCCGCACTAACCTG GCCGCTCCCGGAACGCGATTGCTCTGGGTCGCCCACGACATCGGCGCTCACAGGGGTGAGTATTCTGAGCGACATGATGG GCATGGCGCAGGCCATCTATGCCACCGACGACAGCGGCCAGCTCTGGCACTTTCCGGTCCCGCGGGCGCCCCAGCGCCTT GCGCTGGGGACACCGGTTTGCCTGCACAAGCTGCCGACGGCCGGTAATTCGAGACAAGCGGAACCCCCATTGCTCGTGGG CGCCGTTGCCTCGCCGCTCATTGTGTTCGGCCAGGGCCGTGAAGTCGTGGCCATCCCCTCGCGGCCTGCTGGCGTCCCGG CTCGCATCGTCGCCGAGCCCGCTGACGGAGGGTTTCTGCTACGGTCCATACCCGGTCAGCGAGGCACCGGCTGGCACCTG ACACTGCCGAATGCCGGGGAACAACTGGATACACTCGGTGAAGTCTTTCCCGGCTATCTCCAGTTCACGACACGCGCCGC AGACGGATTTCAGCGCGCCTACCTTGTACTGGCGGCGACGGGCGAATCCGCGGGACGGGCGCGGGAAGGCGCGCCGCTCC AGACGTTCGTAACCGGGCAAGCAGCCAGCTCTGCGGCGTCCTTCGTGGCGACCAGTGTCCCGGGACCGTCCCCGCAACCG TCTTCGGGAACAAGCGGCGCGCAGGCCCACAGGGTCACGCTGTGGGTCGTGGACGGAACGTCTGCCAGGCACCAGTCAAC AGCCATGGCCACGCGCCGTACCGGACGTATCAGCTGGCGGGAAATCATGGCACCCATTCAGCAGGACATTCCGTGA
Upstream 100 bases:
>100_bases AATACGGCCGGCAGACTGCGATGCCGCGCCTTCGCGTCACCGCCATTGGCTTCGGCCGCAACCGCGACATCACTGCTGTG GTCCAGAGCGTGATTCAGCC
Downstream 100 bases:
>100_bases CGCGCGACATTGCATCAGTACACTTTACCTTGCCGCAGCGGGCATTCACCCTGATCGAACTGTTGATCACGATTGCCATG CTGGCCATCCTTGCCGCATT
Product: putative type 4 fimbrial biogenesis pily1-related protein transmembrane
Products: NA
Alternate protein names: Tfp Pilus Assembly -Like Protein; Type IV Pilus Assembly Protein Tip-Associated Adhesin PilY; Type IV Pilus Biogenesis Protein; Type IV Fimbrial Biogenesis PilY1-Related Protein; Type IV Pilus Assembly Protein Tip-Associated Adhesin Pily; Pyrrolo-Quinoline Quinone; Type IV Fimbrial Biogenesis
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSRQHVNTWVLAWLLSSASAAAWAGIVDQPAGNLPLTYLAQAGAYPWTGRLRALAWNPQLARTSEPTPHTTMWEAGARLD TNATASRHLYTSVAPAGMESERLVPLQWSALDAASQQSMADGTSTAASGADKLAWLRGERGNAALRPRETRLADARGARV LVVPPPVWQPGKAGHAAFRERHRNRPHTVWLGTTDAWLHGFSATTGDELVGYMPRALLPLAAVMTAPKGALAPVPCPRPE AADVVMHREWRTVLLCGIPAANEGGSTAGAFVLDISNAADVAPVRLIWELTATPALPLSARGPVRAAAFVYDEGPRWFAV TTVDAGASRAGLALIPLEKTAGPALTWPLPERDCSGSPTTSALTGVSILSDMMGMAQAIYATDDSGQLWHFPVPRAPQRL ALGTPVCLHKLPTAGNSRQAEPPLLVGAVASPLIVFGQGREVVAIPSRPAGVPARIVAEPADGGFLLRSIPGQRGTGWHL TLPNAGEQLDTLGEVFPGYLQFTTRAADGFQRAYLVLAATGESAGRAREGAPLQTFVTGQAASSAASFVATSVPGPSPQP SSGTSGAQAHRVTLWVVDGTSARHQSTAMATRRTGRISWREIMAPIQQDIP
Sequences:
>Translated_611_residues MSRQHVNTWVLAWLLSSASAAAWAGIVDQPAGNLPLTYLAQAGAYPWTGRLRALAWNPQLARTSEPTPHTTMWEAGARLD TNATASRHLYTSVAPAGMESERLVPLQWSALDAASQQSMADGTSTAASGADKLAWLRGERGNAALRPRETRLADARGARV LVVPPPVWQPGKAGHAAFRERHRNRPHTVWLGTTDAWLHGFSATTGDELVGYMPRALLPLAAVMTAPKGALAPVPCPRPE AADVVMHREWRTVLLCGIPAANEGGSTAGAFVLDISNAADVAPVRLIWELTATPALPLSARGPVRAAAFVYDEGPRWFAV TTVDAGASRAGLALIPLEKTAGPALTWPLPERDCSGSPTTSALTGVSILSDMMGMAQAIYATDDSGQLWHFPVPRAPQRL ALGTPVCLHKLPTAGNSRQAEPPLLVGAVASPLIVFGQGREVVAIPSRPAGVPARIVAEPADGGFLLRSIPGQRGTGWHL TLPNAGEQLDTLGEVFPGYLQFTTRAADGFQRAYLVLAATGESAGRAREGAPLQTFVTGQAASSAASFVATSVPGPSPQP SSGTSGAQAHRVTLWVVDGTSARHQSTAMATRRTGRISWREIMAPIQQDIP >Mature_610_residues SRQHVNTWVLAWLLSSASAAAWAGIVDQPAGNLPLTYLAQAGAYPWTGRLRALAWNPQLARTSEPTPHTTMWEAGARLDT NATASRHLYTSVAPAGMESERLVPLQWSALDAASQQSMADGTSTAASGADKLAWLRGERGNAALRPRETRLADARGARVL VVPPPVWQPGKAGHAAFRERHRNRPHTVWLGTTDAWLHGFSATTGDELVGYMPRALLPLAAVMTAPKGALAPVPCPRPEA ADVVMHREWRTVLLCGIPAANEGGSTAGAFVLDISNAADVAPVRLIWELTATPALPLSARGPVRAAAFVYDEGPRWFAVT TVDAGASRAGLALIPLEKTAGPALTWPLPERDCSGSPTTSALTGVSILSDMMGMAQAIYATDDSGQLWHFPVPRAPQRLA LGTPVCLHKLPTAGNSRQAEPPLLVGAVASPLIVFGQGREVVAIPSRPAGVPARIVAEPADGGFLLRSIPGQRGTGWHLT LPNAGEQLDTLGEVFPGYLQFTTRAADGFQRAYLVLAATGESAGRAREGAPLQTFVTGQAASSAASFVATSVPGPSPQPS SGTSGAQAHRVTLWVVDGTSARHQSTAMATRRTGRISWREIMAPIQQDIP
Specific function: Unknown
COG id: COG3419
COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64353; Mature: 64221
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQHVNTWVLAWLLSSASAAAWAGIVDQPAGNLPLTYLAQAGAYPWTGRLRALAWNPQL CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCC ARTSEPTPHTTMWEAGARLDTNATASRHLYTSVAPAGMESERLVPLQWSALDAASQQSMA CCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHC DGTSTAASGADKLAWLRGERGNAALRPRETRLADARGARVLVVPPPVWQPGKAGHAAFRE CCCCHHCCCCHHEEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH RHRNRPHTVWLGTTDAWLHGFSATTGDELVGYMPRALLPLAAVMTAPKGALAPVPCPRPE HHCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AADVVMHREWRTVLLCGIPAANEGGSTAGAFVLDISNAADVAPVRLIWELTATPALPLSA HHHHEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCC RGPVRAAAFVYDEGPRWFAVTTVDAGASRAGLALIPLEKTAGPALTWPLPERDCSGSPTT CCCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCH SALTGVSILSDMMGMAQAIYATDDSGQLWHFPVPRAPQRLALGTPVCLHKLPTAGNSRQA HHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCHHCCCCCHHHHCCCCCCCCCCC EPPLLVGAVASPLIVFGQGREVVAIPSRPAGVPARIVAEPADGGFLLRSIPGQRGTGWHL CCCEEEECCCCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEE TLPNAGEQLDTLGEVFPGYLQFTTRAADGFQRAYLVLAATGESAGRAREGAPLQTFVTGQ ECCCCCHHHHHHHHHCCCHHEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECC AASSAASFVATSVPGPSPQPSSGTSGAQAHRVTLWVVDGTSARHQSTAMATRRTGRISWR HHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCHH EIMAPIQQDIP HHHHHHHHCCC >Mature Secondary Structure SRQHVNTWVLAWLLSSASAAAWAGIVDQPAGNLPLTYLAQAGAYPWTGRLRALAWNPQL CCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCC ARTSEPTPHTTMWEAGARLDTNATASRHLYTSVAPAGMESERLVPLQWSALDAASQQSMA CCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHC DGTSTAASGADKLAWLRGERGNAALRPRETRLADARGARVLVVPPPVWQPGKAGHAAFRE CCCCHHCCCCHHEEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH RHRNRPHTVWLGTTDAWLHGFSATTGDELVGYMPRALLPLAAVMTAPKGALAPVPCPRPE HHCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AADVVMHREWRTVLLCGIPAANEGGSTAGAFVLDISNAADVAPVRLIWELTATPALPLSA HHHHEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCC RGPVRAAAFVYDEGPRWFAVTTVDAGASRAGLALIPLEKTAGPALTWPLPERDCSGSPTT CCCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCH SALTGVSILSDMMGMAQAIYATDDSGQLWHFPVPRAPQRLALGTPVCLHKLPTAGNSRQA HHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCHHCCCCCHHHHCCCCCCCCCCC EPPLLVGAVASPLIVFGQGREVVAIPSRPAGVPARIVAEPADGGFLLRSIPGQRGTGWHL CCCEEEECCCCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEE TLPNAGEQLDTLGEVFPGYLQFTTRAADGFQRAYLVLAATGESAGRAREGAPLQTFVTGQ ECCCCCHHHHHHHHHCCCHHEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECC AASSAASFVATSVPGPSPQPSSGTSGAQAHRVTLWVVDGTSARHQSTAMATRRTGRISWR HHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCHH EIMAPIQQDIP HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA