| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540485
Identifier: 73540485
GI number: 73540485
Start: 851054
End: 851986
Strand: Reverse
Name: 73540485
Synonym: Reut_A0781
Alternate gene names: NA
Gene position: 851986-851054 (Counterclockwise)
Preceding gene: 73540486
Following gene: 73540484
Centisome position: 22.38
GC content: 66.99
Gene sequence:
>933_bases ATGGCTGCAGCCATGAGATCACGCATGCCTGCTGGCTATCGGCGAAGCGGTCCGCGGATGGAAGGCTTCACGCTGACCGA GACGATGGTCGGCCTGGCCCTGGGCGTGCTTGTCACCGCGGTGGCAGGCACCGCTTTCCTGCTATGTCGCGCAGCTTATC TGTCCGCCGCGGAGCGAACCTTGCTGGAGGAACGCGGCCAGCGCGCGCTCAATATTCTGTCCGCCCTGATCCGACAGAGC GGTTGGGTTCCTGATGCAACCGGCATGCCCCACGCCAAGCCCGCGATAAGCGGCGCGGACGACTGCGGCCAGCCGTCGAT CGCTACGGTGCCGGCATGCGGCAAGTCCGGCGTGACAGGCAGCGACGCGCTGCTGGTCCGCTTCAGCGGCAGTGGCCAGG CCATCGATGCCAGCCTGCCCGATCAGACGATGATCGACTGCAGCGGCTACGCCGTTGCCGCCCGGCAATCCGACTCACCT GCCGACGCAGGCTACGTGACTGCGAATCTCCTCTACGTCGCCACTGCCAGCGACGACGAGCCCCAGCTGCTTTGCCGCTA TCCGGCACGGCGGAACGGCCGCATCGATGGCAGCGGTTGGACCTCCGGGGCGATCGTACGAGGCGTGGAATCGATGCAGA TACGCTACGGTGTCGACTCCCGTGGCGACCGGCTTCCGGACACGTTCCTGCGCGCCGATCAGGTCACGGCCATGGGCGAC GACGCATGGCATCGCGTCGTCGCAGTTCAGATAGCGCTAGCGGTCAGGCTGGGGCGGCGTGGCGCCGCACAGAGCGGCAT GCAGGTCGCGGGCGCTGGCGCCATGACTGACCTCTATGACAGGTTGTCCCCCCAGGGCCGATACACGTCGCGGATCTTCG CGACGACGGTCCGCCTGCGGAACGCCCCTCGGTGTCAGGAGACATTGTGCTAG
Upstream 100 bases:
>100_bases ATGCGGTCTCGGCCGAAGGCCCGCGTACCGGCAAGTTGGCCATGGCAGGACTGGCGGTCGGCGAGCCGGGCGCCCCGGCA TCATTGCGCGGCATTGCACT
Downstream 100 bases:
>100_bases CCACACACAAGCCCGGCCCTCGCCCACATGGAGGTGCGACGCTGATGTTTGCCGCGACGCTTCTGCTGCTCGCGGTTCTC ACCGCAACTGCCACGTTGCA
Product: transmembrane protein
Products: NA
Alternate protein names: Type VI Pilus Assembly Protein PilW; Type IV Pilus Assembly Protein PilW; PilW Type IV Pilus Assembly Protein; Type IV Pilus Assembly Protein Pilw; Type VI Pilus Assembly Protein Pilw; Tfp Pilus Assembly Protein PilW; Tfp Pilus Assembly Transmembrane PilW Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAAAMRSRMPAGYRRSGPRMEGFTLTETMVGLALGVLVTAVAGTAFLLCRAAYLSAAERTLLEERGQRALNILSALIRQS GWVPDATGMPHAKPAISGADDCGQPSIATVPACGKSGVTGSDALLVRFSGSGQAIDASLPDQTMIDCSGYAVAARQSDSP ADAGYVTANLLYVATASDDEPQLLCRYPARRNGRIDGSGWTSGAIVRGVESMQIRYGVDSRGDRLPDTFLRADQVTAMGD DAWHRVVAVQIALAVRLGRRGAAQSGMQVAGAGAMTDLYDRLSPQGRYTSRIFATTVRLRNAPRCQETLC
Sequences:
>Translated_310_residues MAAAMRSRMPAGYRRSGPRMEGFTLTETMVGLALGVLVTAVAGTAFLLCRAAYLSAAERTLLEERGQRALNILSALIRQS GWVPDATGMPHAKPAISGADDCGQPSIATVPACGKSGVTGSDALLVRFSGSGQAIDASLPDQTMIDCSGYAVAARQSDSP ADAGYVTANLLYVATASDDEPQLLCRYPARRNGRIDGSGWTSGAIVRGVESMQIRYGVDSRGDRLPDTFLRADQVTAMGD DAWHRVVAVQIALAVRLGRRGAAQSGMQVAGAGAMTDLYDRLSPQGRYTSRIFATTVRLRNAPRCQETLC >Mature_309_residues AAAMRSRMPAGYRRSGPRMEGFTLTETMVGLALGVLVTAVAGTAFLLCRAAYLSAAERTLLEERGQRALNILSALIRQSG WVPDATGMPHAKPAISGADDCGQPSIATVPACGKSGVTGSDALLVRFSGSGQAIDASLPDQTMIDCSGYAVAARQSDSPA DAGYVTANLLYVATASDDEPQLLCRYPARRNGRIDGSGWTSGAIVRGVESMQIRYGVDSRGDRLPDTFLRADQVTAMGDD AWHRVVAVQIALAVRLGRRGAAQSGMQVAGAGAMTDLYDRLSPQGRYTSRIFATTVRLRNAPRCQETLC
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32766; Mature: 32634
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAMRSRMPAGYRRSGPRMEGFTLTETMVGLALGVLVTAVAGTAFLLCRAAYLSAAERT CCCCHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEERGQRALNILSALIRQSGWVPDATGMPHAKPAISGADDCGQPSIATVPACGKSGVTG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC SDALLVRFSGSGQAIDASLPDQTMIDCSGYAVAARQSDSPADAGYVTANLLYVATASDDE CCEEEEEECCCCCEEECCCCCCEEEECCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCC PQLLCRYPARRNGRIDGSGWTSGAIVRGVESMQIRYGVDSRGDRLPDTFLRADQVTAMGD CCEEEECCCCCCCCCCCCCCCCCHHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHEECCC DAWHRVVAVQIALAVRLGRRGAAQSGMQVAGAGAMTDLYDRLSPQGRYTSRIFATTVRLR HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHC NAPRCQETLC CCCCHHHHCC >Mature Secondary Structure AAAMRSRMPAGYRRSGPRMEGFTLTETMVGLALGVLVTAVAGTAFLLCRAAYLSAAERT CCCHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEERGQRALNILSALIRQSGWVPDATGMPHAKPAISGADDCGQPSIATVPACGKSGVTG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC SDALLVRFSGSGQAIDASLPDQTMIDCSGYAVAARQSDSPADAGYVTANLLYVATASDDE CCEEEEEECCCCCEEECCCCCCEEEECCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCC PQLLCRYPARRNGRIDGSGWTSGAIVRGVESMQIRYGVDSRGDRLPDTFLRADQVTAMGD CCEEEECCCCCCCCCCCCCCCCCHHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHEECCC DAWHRVVAVQIALAVRLGRRGAAQSGMQVAGAGAMTDLYDRLSPQGRYTSRIFATTVRLR HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHC NAPRCQETLC CCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA