| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is ubiF [C]
Identifier: 73537436
GI number: 73537436
Start: 159954
End: 161162
Strand: Reverse
Name: ubiF [C]
Synonym: Reut_B3601
Alternate gene names: 73537436
Gene position: 161162-159954 (Counterclockwise)
Preceding gene: 73537437
Following gene: 73537435
Centisome position: 5.91
GC content: 66.67
Gene sequence:
>1209_bases ATGCCAACCGCCATCGAAACGAGGTCGGCGGATGGCGCCCCACCCACTGGCAGAAAGCAGGCAGACAACATGACTTCCCT GAAGATCGGCATCAACGGCGCTGGTATCGGCGGCCTCGCGGCGGCAATCGCGCTGCGCAAGCTCGGCATGGATGTGACCG TGTACGAACAGGCCGCGCGCTTTGCGCGCGTCGGCGCCGACATCAACCTGACTCCTAACGCCGTGCGCGCGCTCGATGGC CTCGGTGTCGGCGAGGCGTTGCGCGAAACCGCGGCACGCCCGACCCATCGCATCAGCCGCACGTGGGATACCGGCGAGGA AACGTCGCGCCTGCCCATGTCGGACGAAGCCGAACAGCGTTACGGCGCGCCGCAGCTCACTATGCACCGAGCCGACCTGA TGACCGCGCTCGAAGGCGCCCTGCCCGCTGCAAACGTCAAGCTCGGCCACAAGGCCGTGGCGATCGAGCGCAATGACAAC GGCACCACCGTGCGCTTTGCCGACGGCGGCGAGGACAAGGTCGATGTTCTGGTCGGCGCGGACGGCATCCACTCGGTGGT CCGTACGGCGCTGTTCGGCCAGGAAAGTCCGATCTTTACCGGCGTCGTGGCGTACCGCGCCGTGGTACCCGCAGAGCGCC TGGCCGGCGTGCCCAATCTCAATGCCTTCACCAAGTGGTGGGGCACGGACCCGACTTCGCAGATCGTCACGTTCCCGCTC AATCGCGGGCGCGATATCTTCATCTTCGCGACGGTGGCGCAGGAAAGCTGGCGCAACGAATCGTGGACCACGCCGGGCCG CGTGGAAGACCTCCGCAGCGCTTATGCAGGGTTCCATCCCGAGGCACGCGCACTGCTGGATGCCTGCGACGACGTGCTGA TCTCCGCGCTGTACGTGCGCGATCCGCTGCCGACGTGGTCGGACGGCCATGTCACGCTGATGGGCGATGCCTGCCATCCG ATGATGCCTTTCATGGCGCAAGGTGCCGGCATGGCGATCGAGGATGGCGTGGTACTCGCACGCTGCCTGGCCGATGCTGC GCAGGACGGCTATGCGGCGGTGCCGTCGGCGCTCGCCCGTTACCAGCGCGCACGCCATGAGCGCACGAGCCGCATCCAGA TCGGCTCGCGCAGCAACGCGTGGCTCAAGGAAGGCGGCAATGCGGACTGGGTGTACGATTACGACGCCTGGAACGTTGCG CTGGGTTGA
Upstream 100 bases:
>100_bases CCTCACGGCTCCTGCTTTCCTCAAATCAACCCGACCTGCTTGACGCCCGGCTTTTTTCGCGCATAAACTTTTATGAACGA TACGTTCATTTTTGAACAAC
Downstream 100 bases:
>100_bases TCCCCACGCAACCCAACCTGTACGGCCGCACTTCGCGGCCGTTTGCCTTTTTCTCCTTGACCATGCCGAAGCAGAGCCCC GACATCGACAACAACGCCGA
Product: salicylate 1-monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MPTAIETRSADGAPPTGRKQADNMTSLKIGINGAGIGGLAAAIALRKLGMDVTVYEQAARFARVGADINLTPNAVRALDG LGVGEALRETAARPTHRISRTWDTGEETSRLPMSDEAEQRYGAPQLTMHRADLMTALEGALPAANVKLGHKAVAIERNDN GTTVRFADGGEDKVDVLVGADGIHSVVRTALFGQESPIFTGVVAYRAVVPAERLAGVPNLNAFTKWWGTDPTSQIVTFPL NRGRDIFIFATVAQESWRNESWTTPGRVEDLRSAYAGFHPEARALLDACDDVLISALYVRDPLPTWSDGHVTLMGDACHP MMPFMAQGAGMAIEDGVVLARCLADAAQDGYAAVPSALARYQRARHERTSRIQIGSRSNAWLKEGGNADWVYDYDAWNVA LG
Sequences:
>Translated_402_residues MPTAIETRSADGAPPTGRKQADNMTSLKIGINGAGIGGLAAAIALRKLGMDVTVYEQAARFARVGADINLTPNAVRALDG LGVGEALRETAARPTHRISRTWDTGEETSRLPMSDEAEQRYGAPQLTMHRADLMTALEGALPAANVKLGHKAVAIERNDN GTTVRFADGGEDKVDVLVGADGIHSVVRTALFGQESPIFTGVVAYRAVVPAERLAGVPNLNAFTKWWGTDPTSQIVTFPL NRGRDIFIFATVAQESWRNESWTTPGRVEDLRSAYAGFHPEARALLDACDDVLISALYVRDPLPTWSDGHVTLMGDACHP MMPFMAQGAGMAIEDGVVLARCLADAAQDGYAAVPSALARYQRARHERTSRIQIGSRSNAWLKEGGNADWVYDYDAWNVA LG >Mature_401_residues PTAIETRSADGAPPTGRKQADNMTSLKIGINGAGIGGLAAAIALRKLGMDVTVYEQAARFARVGADINLTPNAVRALDGL GVGEALRETAARPTHRISRTWDTGEETSRLPMSDEAEQRYGAPQLTMHRADLMTALEGALPAANVKLGHKAVAIERNDNG TTVRFADGGEDKVDVLVGADGIHSVVRTALFGQESPIFTGVVAYRAVVPAERLAGVPNLNAFTKWWGTDPTSQIVTFPLN RGRDIFIFATVAQESWRNESWTTPGRVEDLRSAYAGFHPEARALLDACDDVLISALYVRDPLPTWSDGHVTLMGDACHPM MPFMAQGAGMAIEDGVVLARCLADAAQDGYAAVPSALARYQRARHERTSRIQIGSRSNAWLKEGGNADWVYDYDAWNVAL G
Specific function: Catalyzes the oxidative decarboxylation of 6- hydroxynicotinic acid to 2,5-dihydroxypyridine. Uses NADH in preference to NADPH as an electron donor [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.114 [H]
Molecular weight: Translated: 43211; Mature: 43080
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAIETRSADGAPPTGRKQADNMTSLKIGINGAGIGGLAAAIALRKLGMDVTVYEQAAR CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEHHHHHHH FARVGADINLTPNAVRALDGLGVGEALRETAARPTHRISRTWDTGEETSRLPMSDEAEQR HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHH YGAPQLTMHRADLMTALEGALPAANVKLGHKAVAIERNDNGTTVRFADGGEDKVDVLVGA CCCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCEEEEECCCCCCEEEEECC DGIHSVVRTALFGQESPIFTGVVAYRAVVPAERLAGVPNLNAFTKWWGTDPTSQIVTFPL HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCCCCEEEEEC NRGRDIFIFATVAQESWRNESWTTPGRVEDLRSAYAGFHPEARALLDACDDVLISALYVR CCCCEEEEEEEECHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC DPLPTWSDGHVTLMGDACHPMMPFMAQGAGMAIEDGVVLARCLADAAQDGYAAVPSALAR CCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHH YQRARHERTSRIQIGSRSNAWLKEGGNADWVYDYDAWNVALG HHHHHHHHCCEEEECCCCCCHHHCCCCCCEEEECCCEEEECC >Mature Secondary Structure PTAIETRSADGAPPTGRKQADNMTSLKIGINGAGIGGLAAAIALRKLGMDVTVYEQAAR CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEHHHHHHH FARVGADINLTPNAVRALDGLGVGEALRETAARPTHRISRTWDTGEETSRLPMSDEAEQR HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHH YGAPQLTMHRADLMTALEGALPAANVKLGHKAVAIERNDNGTTVRFADGGEDKVDVLVGA CCCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCEEEEECCCCCCEEEEECC DGIHSVVRTALFGQESPIFTGVVAYRAVVPAERLAGVPNLNAFTKWWGTDPTSQIVTFPL HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCCCCCEEEEEC NRGRDIFIFATVAQESWRNESWTTPGRVEDLRSAYAGFHPEARALLDACDDVLISALYVR CCCCEEEEEEEECHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC DPLPTWSDGHVTLMGDACHPMMPFMAQGAGMAIEDGVVLARCLADAAQDGYAAVPSALAR CCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHH YQRARHERTSRIQIGSRSNAWLKEGGNADWVYDYDAWNVALG HHHHHHHHCCEEEECCCCCCHHHCCCCCCEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA