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The map label for this gene is rpfG [H]

Identifier: 71908365

GI number: 71908365

Start: 2947200

End: 2948570

Strand: Reverse

Name: rpfG [H]

Synonym: Daro_2752

Alternate gene names: 71908365

Gene position: 2948570-2947200 (Counterclockwise)

Preceding gene: 71908366

Following gene: 71908364

Centisome position: 65.51

GC content: 63.31

Gene sequence:

>1371_bases
ATGCCCAATAACTCGCCCTCCCGGTTTACGTTGCCCGCCCTGGCAGGCCTGAAGCTCTCCGAACTGATCTCGGCGCTCAG
TCACGCGCTGGATATCACCGAGGGGCAGCCGGAAGGCCATTGCGTGCGCTGCTGCTGGATCGGCATGCATGTCGGCCGCC
AACTCGGGCTGGATGACGGCGAGTTGTGGAATCTCTATTACACGTTGCTGCTGAAAGATCTTGGTTGCAGCAGCAACGCG
GCGCGTATCTGTGAGCTCTACCTGACCGACGACCTGAGTTTCAAGCGCGATTTCAAGACCGTCGGCGACAGCCTGCCCAA
GGTGCTGCAGTTCGTGCTCAGTCATACCGGCCTGAAAGCCGGGTTGGCAGAACGTTTCCGCAGCGTGTTGACGATCATGC
GCGATGGCGAGCAGATCGCCACCGAACTGATCGCCACCCGCTGCCAGCGTGGTGCCGAAATTGCCCGTTTGCTGCGTTTT
CCGGAAAGCGTCTCGGTCGGTATCTACAGCCTGGACGAGCATTTCAACGGTGAGGGCAAACCCGCGCGGTTGGCCGGTGA
GGCGATTCCGCTTTATTCGCGGATCTCGTTGCTGGCCCAGGTGATCGACGTTTTTCACACGGCCGGTGGGCCACAGGCGG
CACTCGACGAAATCCGCCTGCGGGCCGGACGCTGGTTCGATCCGGCGCTGGTCGACGTGGTCGAGGCGGTAGCCGACGAG
ACCTTCTGGGCGACGCTGGCGGCCCCCGATGTCATGGCGGCGGTGCTGGCGCTGGAGCCGGCTTCGCATGTCGTGGCGCT
CGACGACGATTATCTCGACGACATCGCCGCTGCCTTCGGTCAGGTAGTCGACTCGAAAAGTCCCTACACCAGCGGCCACA
GTGCGCGCGTCGCGCTCTACACCGACCTGATCGCCGAGGCGCTTGGCCTGTCGCCGGAACGTCGCCGTTGGCTGAAGCGT
GGCGCGCTGCTGCACGATGTCGGCAAGCTCGGCGTCAGCAACAGCGTGCTCGACAAACCGGGCAAGCTCGACGCCGAGGA
GTGGGCGGCCGTGCAGGCGCATGCAGCCTACACCGAGGCCATCCTGTCGCGTATCGATGCCTTTTCGGAGCTGGCCAGGG
TGTCGGCCGCGCACCACGAGCGTCTGGATGGCAAGGGCTACCCGCGCGGTGTGAGCGCCGACGATATCTGCCTCGAAACG
CGGATCATCACGACGGCCGATATCTTTGACGCAATCACCGCCGAACGCCCCTATCGTGGCGCGGTGCCGATTCCGAAGAC
CCTGGAAATGATGACCGAAAACGTCGGTACGGCCATCGACGCGCAATGTTTTGATGCACTGAAACAGGCACTTGCCCGCC
TGCCAAGCTGA

Upstream 100 bases:

>100_bases
CGCAATAGTTGAGTCTGGCCGGGCGGGCTGGTGGTGGCGTCGTGCTCCCAGGTCATTGTGAAAACGGAGAACTTTGGCCT
TCGTGGCTAATCTATGACCA

Downstream 100 bases:

>100_bases
ATCCCCCGTAAAATACCCCCTTTGTTCGCCGGCCTGTCCGGATAAGGTTCCATTCGCATGACTATTCAACAAAAAGTGCC
GACCGTCGGCTTCGTTTCTC

Product: metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MPNNSPSRFTLPALAGLKLSELISALSHALDITEGQPEGHCVRCCWIGMHVGRQLGLDDGELWNLYYTLLLKDLGCSSNA
ARICELYLTDDLSFKRDFKTVGDSLPKVLQFVLSHTGLKAGLAERFRSVLTIMRDGEQIATELIATRCQRGAEIARLLRF
PESVSVGIYSLDEHFNGEGKPARLAGEAIPLYSRISLLAQVIDVFHTAGGPQAALDEIRLRAGRWFDPALVDVVEAVADE
TFWATLAAPDVMAAVLALEPASHVVALDDDYLDDIAAAFGQVVDSKSPYTSGHSARVALYTDLIAEALGLSPERRRWLKR
GALLHDVGKLGVSNSVLDKPGKLDAEEWAAVQAHAAYTEAILSRIDAFSELARVSAAHHERLDGKGYPRGVSADDICLET
RIITTADIFDAITAERPYRGAVPIPKTLEMMTENVGTAIDAQCFDALKQALARLPS

Sequences:

>Translated_456_residues
MPNNSPSRFTLPALAGLKLSELISALSHALDITEGQPEGHCVRCCWIGMHVGRQLGLDDGELWNLYYTLLLKDLGCSSNA
ARICELYLTDDLSFKRDFKTVGDSLPKVLQFVLSHTGLKAGLAERFRSVLTIMRDGEQIATELIATRCQRGAEIARLLRF
PESVSVGIYSLDEHFNGEGKPARLAGEAIPLYSRISLLAQVIDVFHTAGGPQAALDEIRLRAGRWFDPALVDVVEAVADE
TFWATLAAPDVMAAVLALEPASHVVALDDDYLDDIAAAFGQVVDSKSPYTSGHSARVALYTDLIAEALGLSPERRRWLKR
GALLHDVGKLGVSNSVLDKPGKLDAEEWAAVQAHAAYTEAILSRIDAFSELARVSAAHHERLDGKGYPRGVSADDICLET
RIITTADIFDAITAERPYRGAVPIPKTLEMMTENVGTAIDAQCFDALKQALARLPS
>Mature_455_residues
PNNSPSRFTLPALAGLKLSELISALSHALDITEGQPEGHCVRCCWIGMHVGRQLGLDDGELWNLYYTLLLKDLGCSSNAA
RICELYLTDDLSFKRDFKTVGDSLPKVLQFVLSHTGLKAGLAERFRSVLTIMRDGEQIATELIATRCQRGAEIARLLRFP
ESVSVGIYSLDEHFNGEGKPARLAGEAIPLYSRISLLAQVIDVFHTAGGPQAALDEIRLRAGRWFDPALVDVVEAVADET
FWATLAAPDVMAAVLALEPASHVVALDDDYLDDIAAAFGQVVDSKSPYTSGHSARVALYTDLIAEALGLSPERRRWLKRG
ALLHDVGKLGVSNSVLDKPGKLDAEEWAAVQAHAAYTEAILSRIDAFSELARVSAAHHERLDGKGYPRGVSADDICLETR
IITTADIFDAITAERPYRGAVPIPKTLEMMTENVGTAIDAQCFDALKQALARLPS

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 49530; Mature: 49399

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNNSPSRFTLPALAGLKLSELISALSHALDITEGQPEGHCVRCCWIGMHVGRQLGLDDG
CCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCC
ELWNLYYTLLLKDLGCSSNAARICELYLTDDLSFKRDFKTVGDSLPKVLQFVLSHTGLKA
HHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
GLAERFRSVLTIMRDGEQIATELIATRCQRGAEIARLLRFPESVSVGIYSLDEHFNGEGK
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCC
PARLAGEAIPLYSRISLLAQVIDVFHTAGGPQAALDEIRLRAGRWFDPALVDVVEAVADE
CCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
TFWATLAAPDVMAAVLALEPASHVVALDDDYLDDIAAAFGQVVDSKSPYTSGHSARVALY
HHHHHHCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
TDLIAEALGLSPERRRWLKRGALLHDVGKLGVSNSVLDKPGKLDAEEWAAVQAHAAYTEA
HHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
ILSRIDAFSELARVSAAHHERLDGKGYPRGVSADDICLETRIITTADIFDAITAERPYRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEHHHHHHHHHHCCCCCCC
AVPIPKTLEMMTENVGTAIDAQCFDALKQALARLPS
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNNSPSRFTLPALAGLKLSELISALSHALDITEGQPEGHCVRCCWIGMHVGRQLGLDDG
CCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCC
ELWNLYYTLLLKDLGCSSNAARICELYLTDDLSFKRDFKTVGDSLPKVLQFVLSHTGLKA
HHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
GLAERFRSVLTIMRDGEQIATELIATRCQRGAEIARLLRFPESVSVGIYSLDEHFNGEGK
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCC
PARLAGEAIPLYSRISLLAQVIDVFHTAGGPQAALDEIRLRAGRWFDPALVDVVEAVADE
CCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
TFWATLAAPDVMAAVLALEPASHVVALDDDYLDDIAAAFGQVVDSKSPYTSGHSARVALY
HHHHHHCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
TDLIAEALGLSPERRRWLKRGALLHDVGKLGVSNSVLDKPGKLDAEEWAAVQAHAAYTEA
HHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
ILSRIDAFSELARVSAAHHERLDGKGYPRGVSADDICLETRIITTADIFDAITAERPYRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEHHHHHHHHHHCCCCCCC
AVPIPKTLEMMTENVGTAIDAQCFDALKQALARLPS
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]