| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is surE
Identifier: 71908140
GI number: 71908140
Start: 2721516
End: 2722256
Strand: Reverse
Name: surE
Synonym: Daro_2524
Alternate gene names: 71908140
Gene position: 2722256-2721516 (Counterclockwise)
Preceding gene: 71908141
Following gene: 71908139
Centisome position: 60.48
GC content: 52.5
Gene sequence:
>741_bases ATGCGTATTCTGCTCAGTAATGATGACGGCTATTTCGCACCGGGTCTTGCCGCACTGGCTGAAGCTCTGGATGGTCTCGG CGAGGTCGTCGTGGTTGCCCCTGAGCAGAATCGCAGTGGTGCCAGTAATTCGCTGACACTGGATCGGCCGCTGTTGCTAA AAAAAGCGGCCACTGGTTTTTATTTCGTGAATGGCACGCCGACTGACTGTGTCCATCTGGCTGTGACTGGCATGCTCGAC AAATTGCCGGATATTATTGTGTCCGGAATTAATCTGGGTGCCAATATGGGCGACGATACGATTTATTCCGGAACCGTTGC AGCAGCAACGGAAGGGTATTTGCTGGGGATTCCCTCCATCGCTATTTCCATGACTAGTTTTGAGGGAAATAACTTTGCCT CGGCTGCTCGGGTGGCGCGTGAATTGGTTGAGCGTTTTATTCGCAATCCAATTAGCGAGCCGGTTTTGCTGAATGTAAAT GTTCCCGATATTTCCTATTCCGACCTAAAGGGCACAGAGGTGACTCGTCTTGGTCGTCGGCATAAGGCGGAACCAGTTGT CAAAATGCAGTCGCCTCGCAATGAGACCGTTTACTGGGTTGGTGCTGCAGGTGCGGCGGCGGATGCGGGGCCGGGGACTG ACTTTAATGCGGTCGAACGAGGCTTTGTTTCGATTACGCCCTTGCAGATTGATCTGACGCATTCGGCGCAGCTATCCCAT ATCGATCAGTGGATGAAGTGA
Upstream 100 bases:
>100_bases GAATCCTGAATTGGAATGGACCGGTCGTGGCCGCAAGCCAAAATGGGTTGAAGCCTGGGTGGCAAATGGTGCCACCTTGG AAAGTTTGTTGGTCTGATCC
Downstream 100 bases:
>100_bases GTCAAGGCGTGTTGCACGGTATTGGCATGACTTCGCAGCGGACGCGGGCGCGCATGATTGAGCGCCTGCGCGAGAAGGGG ATTCGCAACGAGGCGGTTCT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRILLSNDDGYFAPGLAALAEALDGLGEVVVVAPEQNRSGASNSLTLDRPLLLKKAATGFYFVNGTPTDCVHLAVTGMLD KLPDIIVSGINLGANMGDDTIYSGTVAAATEGYLLGIPSIAISMTSFEGNNFASAARVARELVERFIRNPISEPVLLNVN VPDISYSDLKGTEVTRLGRRHKAEPVVKMQSPRNETVYWVGAAGAAADAGPGTDFNAVERGFVSITPLQIDLTHSAQLSH IDQWMK
Sequences:
>Translated_246_residues MRILLSNDDGYFAPGLAALAEALDGLGEVVVVAPEQNRSGASNSLTLDRPLLLKKAATGFYFVNGTPTDCVHLAVTGMLD KLPDIIVSGINLGANMGDDTIYSGTVAAATEGYLLGIPSIAISMTSFEGNNFASAARVARELVERFIRNPISEPVLLNVN VPDISYSDLKGTEVTRLGRRHKAEPVVKMQSPRNETVYWVGAAGAAADAGPGTDFNAVERGFVSITPLQIDLTHSAQLSH IDQWMK >Mature_246_residues MRILLSNDDGYFAPGLAALAEALDGLGEVVVVAPEQNRSGASNSLTLDRPLLLKKAATGFYFVNGTPTDCVHLAVTGMLD KLPDIIVSGINLGANMGDDTIYSGTVAAATEGYLLGIPSIAISMTSFEGNNFASAARVARELVERFIRNPISEPVLLNVN VPDISYSDLKGTEVTRLGRRHKAEPVVKMQSPRNETVYWVGAAGAAADAGPGTDFNAVERGFVSITPLQIDLTHSAQLSH IDQWMK
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=248, Percent_Identity=51.2096774193548, Blast_Score=242, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_DECAR (Q47D24)
Other databases:
- EMBL: CP000089 - RefSeq: YP_285727.1 - ProteinModelPortal: Q47D24 - SMR: Q47D24 - STRING: Q47D24 - GeneID: 3567558 - GenomeReviews: CP000089_GR - KEGG: dar:Daro_2524 - NMPDR: fig|159087.4.peg.2888 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: NGFYYVN - ProtClustDB: PRK00346 - BioCyc: DARO159087:DARO_2524-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 26157; Mature: 26157
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLSNDDGYFAPGLAALAEALDGLGEVVVVAPEQNRSGASNSLTLDRPLLLKKAATGF CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCHHHHCCCCCE YFVNGTPTDCVHLAVTGMLDKLPDIIVSGINLGANMGDDTIYSGTVAAATEGYLLGIPSI EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEECCCCEEEECCCE AISMTSFEGNNFASAARVARELVERFIRNPISEPVLLNVNVPDISYSDLKGTEVTRLGRR EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH HKAEPVVKMQSPRNETVYWVGAAGAAADAGPGTDFNAVERGFVSITPLQIDLTHSAQLSH CCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCHHHHH IDQWMK HHHHCC >Mature Secondary Structure MRILLSNDDGYFAPGLAALAEALDGLGEVVVVAPEQNRSGASNSLTLDRPLLLKKAATGF CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCHHHHCCCCCE YFVNGTPTDCVHLAVTGMLDKLPDIIVSGINLGANMGDDTIYSGTVAAATEGYLLGIPSI EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEECCCCEEEECCCE AISMTSFEGNNFASAARVARELVERFIRNPISEPVLLNVNVPDISYSDLKGTEVTRLGRR EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH HKAEPVVKMQSPRNETVYWVGAAGAAADAGPGTDFNAVERGFVSITPLQIDLTHSAQLSH CCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCHHHHH IDQWMK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA