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The map label for this gene is hvrA [H]

Identifier: 71908141

GI number: 71908141

Start: 2722260

End: 2722577

Strand: Reverse

Name: hvrA [H]

Synonym: Daro_2525

Alternate gene names: 71908141

Gene position: 2722577-2722260 (Counterclockwise)

Preceding gene: 71908143

Following gene: 71908140

Centisome position: 60.49

GC content: 49.37

Gene sequence:

>318_bases
ATGGATTTGTCCACTTTGACTGTGTCTCAGTTACGTGACTTGCAGCAACAGATTCCGGCCGAGATTAAGCGCCGTGAAGC
TCAGGAAAAAGTTAATGTCCTGAATGAATTACGTGCCTTCGCAAAAACCCGCGGTTATGCCATCGAGGAATTGCTGGGCA
AGGAAGCCAAGGTAAAGGCTGCGACCGGGAATAAGGTCAAGGTTAAATATCGTCATCCACAGAATCCTGAATTGGAATGG
ACCGGTCGTGGCCGCAAGCCAAAATGGGTTGAAGCCTGGGTGGCAAATGGTGCCACCTTGGAAAGTTTGTTGGTCTGA

Upstream 100 bases:

>100_bases
AATTAAATAACCGGCTTTTGCCGGTTTTTTAATTTGTGGCGTTGATAAATATAATAAGACAAATTAAATTATTGCCACGC
ATTTAAATAAGGAGGTAATC

Downstream 100 bases:

>100_bases
TCCATGCGTATTCTGCTCAGTAATGATGACGGCTATTTCGCACCGGGTCTTGCCGCACTGGCTGAAGCTCTGGATGGTCT
CGGCGAGGTCGTCGTGGTTG

Product: histone-like nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDLSTLTVSQLRDLQQQIPAEIKRREAQEKVNVLNELRAFAKTRGYAIEELLGKEAKVKAATGNKVKVKYRHPQNPELEW
TGRGRKPKWVEAWVANGATLESLLV

Sequences:

>Translated_105_residues
MDLSTLTVSQLRDLQQQIPAEIKRREAQEKVNVLNELRAFAKTRGYAIEELLGKEAKVKAATGNKVKVKYRHPQNPELEW
TGRGRKPKWVEAWVANGATLESLLV
>Mature_105_residues
MDLSTLTVSQLRDLQQQIPAEIKRREAQEKVNVLNELRAFAKTRGYAIEELLGKEAKVKAATGNKVKVKYRHPQNPELEW
TGRGRKPKWVEAWVANGATLESLLV

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 11938; Mature: 11938

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSTLTVSQLRDLQQQIPAEIKRREAQEKVNVLNELRAFAKTRGYAIEELLGKEAKVKA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEE
ATGNKVKVKYRHPQNPELEWTGRGRKPKWVEAWVANGATLESLLV
CCCCEEEEEEECCCCCCEEECCCCCCCHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure
MDLSTLTVSQLRDLQQQIPAEIKRREAQEKVNVLNELRAFAKTRGYAIEELLGKEAKVKA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEE
ATGNKVKVKYRHPQNPELEWTGRGRKPKWVEAWVANGATLESLLV
CCCCEEEEEEECCCCCCEEECCCCCCCHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]