| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907856
Identifier: 71907856
GI number: 71907856
Start: 2413371
End: 2414714
Strand: Reverse
Name: 71907856
Synonym: Daro_2234
Alternate gene names: NA
Gene position: 2414714-2413371 (Counterclockwise)
Preceding gene: 71907857
Following gene: 71907852
Centisome position: 53.65
GC content: 57.44
Gene sequence:
>1344_bases GTGGGACCTACCGTACTGGACGAACGTGGTGCTTTTGCTGTCGAGAATCCCGAGGTTGCCGAGGTAATGGAGATCGCCTC GGGGGATCATCTCGATCATGGCGAAGTCATCGGCACCGATTACGAAAAGGCGATCCAATTGCGGATGGCGCTCCGCACCG ACATCAAGCGAGGCACGCCCCACTATGCCTGCTCATTGTGTGGGGTGCCTGTCTACCTAGTGTCGCGCGCCGAAGAGCGG CGTTTCTTCTTCCGGCATACGCTGGAAGATGGGCGTTGCTTGGCGCGCACGCGGGGTGAGCTATCGCAGGAGGAGATTGA TGCAAGGCGTTACAACGGCGTCAAGGAAAGCGCCCGGCACCTGCAGATGAAAGAGTGGGTCGCACAGTGTTTGGCGGCTG ACCCCCGGTTCACGGACGTGGCCACCGAAAAACGATGGTCTGGCACACTGACGGCAGAGTGGCGAAAGCCTGATGTGCGT GCAATCTATCGGGGCATTCCAGTGGTTTTCGAGATTCAGTTGTCCACCACGTATGTGAATGTGATTGCCGAGCGCCGCGA GTTCTACTTGCAGGAAGGTGGTTTGTTGATCTGGATCTTTGCCCACTTCGACGGCGGGGCGCGGCGGTTGACTCAGGACG ACGTGTTTTTTAATAACAACCGTAATGCCTTTGTAGTGACGCAGGCAACTCGCGATGCTTCCGTGCAGCAGGGACGGTTC ATGCTGGATTGCATCTGGGCCGAGCCGACATTGATGGGAAATGCAGACCTGCAACGCCGGGTGGTTGGGTTTGACGACTT GACCTTGGAGCGGGAGAGCCAGCGTGCCTACTACTTCGATTTCGACGGAGCACGGGACGCTCTGCAAGAGCAGGTCCGTG AACGAGAACGACAACGTCTTGCCGAGGTACGGGAGAAGTTCGAGACTTGGTGGCTCGACTACGAAACGAGCGACACGCCG GACTATCGTGGCTGGGCTGAGCTACGGCGGGCATTGGCGGCTGAAAGGGTTGAACTTCCTCAATACCCCAACCATGTACC CCGCACATTGTTGAATGCGCTGTACTCCGCAAAACATGGGCGCGTGATCGGTTGGCGCTTCAAGACCTTTATCGAGGTCG CACACCGTGTCGAACCGGCGCACAGGCGCTACCTGCATTATTTCCGCCGGGCACTGGCTGCCTACGACCGCGCCGACCAG TTGCGAGCCGAGGATAAATCGGGGAAGTGGGCGCTCAAGGTGAAGCATTACAAGGCGCAGATGCAGATCAACGATCCTGC CTACACGCCGGATACCTCAGATATGAAACTGGTTGTTCTTTTATTCCCAGAGATCTTTGTATAG
Upstream 100 bases:
>100_bases CCCGTCGCCTGCGACCGCGAAGAAACCATGACATGCTGGTTCCTGCCGAGGTACAGGTGCGCCGATCTGCAGCCAAGGCC TATTGTTGAGAGGGCTAGTC
Downstream 100 bases:
>100_bases CGCTGATACCTCCGGAAGCCCCAGAGAAAGGGCAAGGAGCGTTGGCCGCGTGGCGCAACGCCCTGCCGTAGATAAGTTAT GCTCGGTTGGTGGGCAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MGPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTPHYACSLCGVPVYLVSRAEER RFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARHLQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVR AIYRGIPVVFEIQLSTTYVNVIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRLAEVREKFETWWLDYETSDTP DYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHGRVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQ LRAEDKSGKWALKVKHYKAQMQINDPAYTPDTSDMKLVVLLFPEIFV
Sequences:
>Translated_447_residues MGPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTPHYACSLCGVPVYLVSRAEER RFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARHLQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVR AIYRGIPVVFEIQLSTTYVNVIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRLAEVREKFETWWLDYETSDTP DYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHGRVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQ LRAEDKSGKWALKVKHYKAQMQINDPAYTPDTSDMKLVVLLFPEIFV >Mature_446_residues GPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTPHYACSLCGVPVYLVSRAEERR FFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARHLQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVRA IYRGIPVVFEIQLSTTYVNVIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRFM LDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRLAEVREKFETWWLDYETSDTPD YRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHGRVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQL RAEDKSGKWALKVKHYKAQMQINDPAYTPDTSDMKLVVLLFPEIFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52110; Mature: 51978
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTP CCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCC HYACSLCGVPVYLVSRAEERRFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARH CHHHHHCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHH LQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVRAIYRGIPVVFEIQLSTTYVN HHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEEECHHHHH VIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHCCCE MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRL EEEEEECCCCEECCCCHHHHEECCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH AEVREKFETWWLDYETSDTPDYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHG HHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC RVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQLRAEDKSGKWALKVKHYKAQ CEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEE MQINDPAYTPDTSDMKLVVLLFPEIFV EEECCCCCCCCCCCCEEEEEECCHHCC >Mature Secondary Structure GPTVLDERGAFAVENPEVAEVMEIASGDHLDHGEVIGTDYEKAIQLRMALRTDIKRGTP CCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCC HYACSLCGVPVYLVSRAEERRFFFRHTLEDGRCLARTRGELSQEEIDARRYNGVKESARH CHHHHHCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHH LQMKEWVAQCLAADPRFTDVATEKRWSGTLTAEWRKPDVRAIYRGIPVVFEIQLSTTYVN HHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEEECHHHHH VIAERREFYLQEGGLLIWIFAHFDGGARRLTQDDVFFNNNRNAFVVTQATRDASVQQGRF HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHCCCE MLDCIWAEPTLMGNADLQRRVVGFDDLTLERESQRAYYFDFDGARDALQEQVRERERQRL EEEEEECCCCEECCCCHHHHEECCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH AEVREKFETWWLDYETSDTPDYRGWAELRRALAAERVELPQYPNHVPRTLLNALYSAKHG HHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC RVIGWRFKTFIEVAHRVEPAHRRYLHYFRRALAAYDRADQLRAEDKSGKWALKVKHYKAQ CEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEE MQINDPAYTPDTSDMKLVVLLFPEIFV EEECCCCCCCCCCCCEEEEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA