| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907690
Identifier: 71907690
GI number: 71907690
Start: 2220090
End: 2222456
Strand: Reverse
Name: 71907690
Synonym: Daro_2063
Alternate gene names: NA
Gene position: 2222456-2220090 (Counterclockwise)
Preceding gene: 71907691
Following gene: 71907689
Centisome position: 49.38
GC content: 61.98
Gene sequence:
>2367_bases ATGCTGACCACACACACGCCGCTCGCCGCCGACGAACTGGATCGAATGAATGCCTGGTGGCGCGCCGCCAACTATCTTTC GGTCGGCCAGATCTACCTGCTCGACAACCCGCTGCTCAAAACACCACTCACGCTGGCGCACATCAAGCCGCGTCTATTGG GCCACTGGGGTACGACGCCGGGACTGAACTTCATCTACGTGCATATGAACCGGGTGATCCGGCAGCACGGTCTGAACATG ATCTTCATTGCCGGCCCCGGCCACGGAGGCCCGGGCGTGGTGGCGAATACCTGGCTCGAAGGCAGCTACAGCGAGTTTTA CCAGAATATTTCACAGGACGAGGAGGGCATGCGCCGGCTGTTCCGCCAGTTCTCCTTCCCTGGCGGCATTCCCAGTCATG CCTCGCCGGATACACCGGGATCGATCCACGAAGGCGGCGAACTCGGTTACGCGCTGTTCCATGCCTATGGTGCGGTGTTC GACAACCCGCACCTGATCACCTGTTGCGTCGTTGGCGATGGCGAAGCGGAAACCGGGCCGCTGGCCACCTCATGGCACTC CAACAAATTCCTCAATCCGCGCACCGACGGCGCCGTGCTGCCCATCCTGCATCTCAACGGCTACAAGATCGCCAACCCGA CCATCCTGGCCCGGATCAGCCACACCGAACTGGAATGCCTGTTCGTGGGTTATGGCTACCAGCCGCTCTTTGTCGAGGGC GACGATCCGCAAACCATGCATCAGTTGATGGCAGCAGCCGTCGACACGGCAATCGCCAGCATTGCCGCCATCCAGCGCCG GGCGCGTGAAGGCGGCGACGAAAGCCGGCCGCGCTGGCCGATGATCATCCTGCGTTCGCCAAAAGGCTGGACCGGGCCGA AAACAGTCGACGGCAAGCAGAGCGAAGGCTCCTGGCGTTCGCATCAGGTGCCGTTCAGCGACATGGACAAGCCGGAGCAT GTGCAATTGCTGGGCGAATGGATGGCCTCCTACAAACCCGCCGAGCTGTTCGACAAGGATGGCCGGCTGATGCCCGAGAT CGCCGCACTGGCCCCCGCTGGGCAACGGCGCATGGGCGCCAACCTGCACGCCAACGGTGGCGCCTTGCTGCGTGACCTGC GTCTGCCGGATTTTCGCGACTACGCCGTGGCGGTGCCGACGCCAGGTGGCTCAGTGGCCGAGGCGACGCGCGCCATGGGC GTCTTCCTGCGCGATGTGATGCGCCAGAACCCGGACAATTTCCGCGTCTTCGGTCCGGATGAAACCGCTTCCAACCGCCT CGGCGCGCTGTTCGAAGTCACCAACCGGACATGGATGGCCGAACACCTGGCTGGTGACGACCATCTGGCGCCCGATGGCC GGGTCATGGAAGTGCTTTCCGAACACGCCTGCCAGGGCTGGCTCGAAGGCTACCTGCTGACCGGCCGTCACGGCCTGTTC TCCTGCTACGAAGCCTTCATCCACATCGTCGATTCGATGTTCAACCAGCACGCCAAGTGGCTGAAGATGTGTGGCGAGAT TCCCTGGCGGCGGCCGATTGCCTCGCTCAACATCCTGCTCACCTCGCACGTCTGGCGCCAGGATCACAACGGTTTCTCGC ATCAGGACCCGGGCTTCATCGACCACGTGGTCAACAAGAAGGCCGACATCATCCGCGTTTATCTGCCGCCCGATGCCAAC ACCCTGCTTTACGTCACCGACCGCTGCCTGAAGAGCCGCAATCTGGTCAATGTCATCGTCGCCGGCAAGCAGCCGGACTG GCAGTGGCTGGACATGGAAGCCGCGATCAACCATGCCAGCGCCGGTATCGGCCTGTGGGAATGGGCTTGCAACGACCAGC CGGGCGAACCGGACATCGTGCTCGCCTCGGCCGGGGATGTACCGACGCTGGAAATGCTGGCTGCCATCGACATCCTGCAC CGCATGGTGCCGACCCTGAAGATCCGCTATATCAATGTTGTCGACCTGATGACCCTGCAGCCGCAGGAAGAGCATCCGCA TGGTCTGTCGAGCGACGAATTCAATTCGCTGTTCACCACCGACAAGCCGATCATCTTTGCTTACCACGGCTATCCGTGGC TGATTCACCGTCTGACCTATCGGCGCACCAACACCAATCTGCATGTGCGCGGCTACAAGGAAGAGGGCACCACGACGACG CCTTTCGACATGGTCGTGCTCAACAATCTGGACCGCTACCATCTGGTCATGGACGTGGCCAAGCGGGTGCCGAAACTGCA CGCCCAGGCGGCGCACATCAAGCAGGCCATGCGTGACAAGCTCAACCAGCACACGCAATACATCCTCGAACACGGCGAAG ACATGCCGGAAATCCTCGACTGGCAATGGCCGGGAGCGAAGTCATGA
Upstream 100 bases:
>100_bases CGGCGCTGCGCTGGCCCTGCAACTGCTCGACGAACTCGAAGCCCTGCAAGCCCGGCTGCGCAAAGCCGGCGCTCTATGAA AACGGAACAAGGATAAGCCA
Downstream 100 bases:
>100_bases ATAAATCCAAAAGCACCAACCCGCTGCTGGCGATCAAGGCGCTTGGCCAGCACCTCTGGCTCGACAACCTGTCGCGCACC TTGTTGCGCGAAGGCGGCCT
Product: putative phosphoketolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTPGLNFIYVHMNRVIRQHGLNM IFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRLFRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVF DNPHLITCCVVGDGEAETGPLATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQSEGSWRSHQVPFSDMDKPEH VQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGANLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMG VFLRDVMRQNPDNFRVFGPDETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADIIRVYLPPDAN TLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHASAGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILH RMVPTLKIRYINVVDLMTLQPQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILDWQWPGAKS
Sequences:
>Translated_788_residues MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTPGLNFIYVHMNRVIRQHGLNM IFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRLFRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVF DNPHLITCCVVGDGEAETGPLATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQSEGSWRSHQVPFSDMDKPEH VQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGANLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMG VFLRDVMRQNPDNFRVFGPDETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADIIRVYLPPDAN TLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHASAGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILH RMVPTLKIRYINVVDLMTLQPQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILDWQWPGAKS >Mature_788_residues MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTPGLNFIYVHMNRVIRQHGLNM IFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRLFRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVF DNPHLITCCVVGDGEAETGPLATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQSEGSWRSHQVPFSDMDKPEH VQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGANLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMG VFLRDVMRQNPDNFRVFGPDETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADIIRVYLPPDAN TLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHASAGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILH RMVPTLKIRYINVVDLMTLQPQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILDWQWPGAKS
Specific function: Unknown
COG id: COG3957
COG function: function code G; Phosphoketolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the XFP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005593 - InterPro: IPR018969 - InterPro: IPR019790 - InterPro: IPR018970 - InterPro: IPR019789 [H]
Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]
EC number: NA
Molecular weight: Translated: 88412; Mature: 88412
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTP CCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEECCCHHHCCCHHHHHCHHHHCCCCCCC GLNFIYVHMNRVIRQHGLNMIFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRL CCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHH FRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVFDNPHLITCCVVGDGEAETGP HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC LATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG EEECCCCCCCCCCCCCCCEEEEEEECCEEECCCEEEEEEECCCEEEEEEECCCEEEEEEC DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC SEGSWRSHQVPFSDMDKPEHVQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHCCCCCHHCCC NLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMGVFLRDVMRQNPDNFRVFGPD CEECCCCHHEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC ETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF CCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHH SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH DHVVNKKADIIRVYLPPDANTLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHAS HHHHCCCCCEEEEEECCCCCEEEEEEHHHHCCCCEEEEEEECCCCCCEEEEHHHHHHHHC AGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILHRMVPTLKIRYINVVDLMTLQ CCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECC PQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT CCCCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHEECCCEEEEEEECCCCCCCC PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILD CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC WQWPGAKS CCCCCCCC >Mature Secondary Structure MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTP CCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEECCCHHHCCCHHHHHCHHHHCCCCCCC GLNFIYVHMNRVIRQHGLNMIFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRL CCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHH FRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVFDNPHLITCCVVGDGEAETGP HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC LATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG EEECCCCCCCCCCCCCCCEEEEEEECCEEECCCEEEEEEECCCEEEEEEECCCEEEEEEC DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC SEGSWRSHQVPFSDMDKPEHVQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHCCCCCHHCCC NLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMGVFLRDVMRQNPDNFRVFGPD CEECCCCHHEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC ETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF CCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHH SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH DHVVNKKADIIRVYLPPDANTLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHAS HHHHCCCCCEEEEEECCCCCEEEEEEHHHHCCCCEEEEEEECCCCCCEEEEHHHHHHHHC AGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILHRMVPTLKIRYINVVDLMTLQ CCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECC PQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT CCCCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHEECCCEEEEEEECCCCCCCC PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILD CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC WQWPGAKS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA