| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907619
Identifier: 71907619
GI number: 71907619
Start: 2142320
End: 2142718
Strand: Reverse
Name: 71907619
Synonym: Daro_1990
Alternate gene names: NA
Gene position: 2142718-2142320 (Counterclockwise)
Preceding gene: 71907622
Following gene: 71907613
Centisome position: 47.6
GC content: 52.63
Gene sequence:
>399_bases ATGGCTGATCATTTTACGGACATTTCTGTCAGCGCGCGCCATTCAGAATTACCCGATTTGCATCGAATGCTCGCTGAACA CGCCAACCGATTCGGCATTTCGGCCGACGATGTTTTGCGCCTGCAATTGTTAGCTGAGGAATTGTTTATCAACACAATCT CTCATGGCTACCGTGGCGACAGTGATGCCTCCATCCATCTGAGCCTGACCCGGAATGGCAATGCGCTGCATCTTTGTTAT GAGGACAAGGCGCCGGCCTTTGACCCGACAAGAACACCCGAAAAGCAGGAGGCAGCAAGCGACATCGGCGGCTTGGGCAT CTGCCTTATCCGGGGTATGTGCAAAAAGGTCCGCTACGAACGTCGAAACGACAGCAACGTTATCGACATCGACCTTTAG
Upstream 100 bases:
>100_bases GTTCGGCAGCCATAGCGGGAAGGCTAGCAATCAATCCACCCACCGCCATACAGACAGCCACCCAATGTGCTTTAATCATG TGCAATACCTAGTAGATTCA
Downstream 100 bases:
>100_bases GCAGCGCTCCGCAAAACCAGCAAGGGCGCCGTCATGACCAGACGACGCACGGCCAGCCAGCCGATGGCCACAGTGACCAG GGCGCCGCCAGCCATCGTCA
Product: sensor histidine kinase
Products: NA
Alternate protein names: Anti-Sigma Regulatory Factor
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MADHFTDISVSARHSELPDLHRMLAEHANRFGISADDVLRLQLLAEELFINTISHGYRGDSDASIHLSLTRNGNALHLCY EDKAPAFDPTRTPEKQEAASDIGGLGICLIRGMCKKVRYERRNDSNVIDIDL
Sequences:
>Translated_132_residues MADHFTDISVSARHSELPDLHRMLAEHANRFGISADDVLRLQLLAEELFINTISHGYRGDSDASIHLSLTRNGNALHLCY EDKAPAFDPTRTPEKQEAASDIGGLGICLIRGMCKKVRYERRNDSNVIDIDL >Mature_131_residues ADHFTDISVSARHSELPDLHRMLAEHANRFGISADDVLRLQLLAEELFINTISHGYRGDSDASIHLSLTRNGNALHLCYE DKAPAFDPTRTPEKQEAASDIGGLGICLIRGMCKKVRYERRNDSNVIDIDL
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14760; Mature: 14629
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHFTDISVSARHSELPDLHRMLAEHANRFGISADDVLRLQLLAEELFINTISHGYRGD CCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SDASIHLSLTRNGNALHLCYEDKAPAFDPTRTPEKQEAASDIGGLGICLIRGMCKKVRYE CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH RRNDSNVIDIDL CCCCCCEEEEEC >Mature Secondary Structure ADHFTDISVSARHSELPDLHRMLAEHANRFGISADDVLRLQLLAEELFINTISHGYRGD CCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SDASIHLSLTRNGNALHLCYEDKAPAFDPTRTPEKQEAASDIGGLGICLIRGMCKKVRYE CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH RRNDSNVIDIDL CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA