| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is lplT [H]
Identifier: 71907613
GI number: 71907613
Start: 2132832
End: 2134097
Strand: Reverse
Name: lplT [H]
Synonym: Daro_1984
Alternate gene names: 71907613
Gene position: 2134097-2132832 (Counterclockwise)
Preceding gene: 71907619
Following gene: 71907609
Centisome position: 47.41
GC content: 58.61
Gene sequence:
>1266_bases GTGCCGTTCGGCTTCTACATCATCATGGCCGCGCAGTTTTTTTCCGCGCTGGCCGACAACGCCCTGCTGATTGCCGCTAT CGCCGCCCTGCGCGAGATGCACGCACCTTCGGAATACGAACCGCTACTCAAGACTTTTTTCACCGTTTCCTACGTACTGC TGGCCGCCTTCGTCGGTGCCTTTGCCGACTCCATGCCCAAGTGGCGGGTCATGTTCATCAGCAACACGATCAAGATCGTC GGCTGCAGCATGATGTTCTTTGGCGCACACCCGCTGGCTGCCTATGCCGTAGTCGGTCTGGGGGCTGCAGCCTACTCGCC GGCCAAGTACGGCATCCTGACCGAATACCTGCCGCATCGCCTGCTCGTCGTGGCCAATGGCTGGATCGAGGGGCTAACCG TCGGCGCGATCATTCTCGGCGTCGTTATCGGCGGCACATTGATCCGCCCTGAAGTGGCCCAGCATCTGCTATCTTTCGAT TTTCCGCTGTTCGATACGGGGGTCGACACGGTCGGCGAAATGGCTCTTTCCATCGTTGCCGTGCTCTATGTGCTTGCCGC CATCTTCAACCTGTACGTCCCGGATACCGGGGTTGACCACAAGCAGTTGAAGAAAAACCCGATATTCCTGATCCACGAGT TCAATCACTGCCTGGCCCTGCTTTGGCGCGACAAACTCGGTCAAATCTCGCTGGCGGTCACCACGCTGTTCTGGGGGGCC GGTGCGACGCTGCAGTTCATCGTCATCAAGTGGGCCGAAGTGGCTCTCGGTCTCGGCCTCTCCAAGGCGTCAATGCTGCA GGGTGTCGTTGCGGTCGGCGTCGCAGCCGGGGCAATCATCGCTGCCAAGTTCATCACACTGCGCAAATCGGTTCGCGTCA TTCCGCTCGGCATCGCCATGGGCCTGATCGTGCTGGTCATGAACTTCGTCGGCAGCTTGTGGCTGGCCGTACCGCTGCTC ATCATCATTGGCGGCTTGTCCGGCTTCTTTGTCGTGCCGATGAATGCGCTGCTCCAGCATCGCGGCCACATCCTGATGGG TGCCGGCCACTCGATTGCGGTTCAGAACTTCAACGAAAACATCTCCATCCTGATCATGACCGGGCTCTATTACCTGATGA TCAAGATGGATTTGTCGATCTACTGGGTTGTCACGATGTTCGGGCTGTTCGTCAGCGGCCTGATGTACATGATCCGCCAG CGCCACTTTGCCAATCAGGCAGCACAGGACGACGTCCAGCACCTGGACGATTCAGCACACCACTAA
Upstream 100 bases:
>100_bases CGGCAAAATAATGCACAACCCCGACGACAGCGCAAGCCTTGCGCCCAATCCTGAGCGTGGTATAAACCTCGCCCAAAGTC ATATAAGAGACAAATACTTC
Downstream 100 bases:
>100_bases GGCCTAGAACGGCAGTTCAGGCGCCATTTGCTCGCGCAGCGTTCGACGAGCGAACAGCAGGTCTTCCCAGGCCTTCGCTT TGTCCGGCAAGTTGCGCAAC
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MPFGFYIIMAAQFFSALADNALLIAAIAALREMHAPSEYEPLLKTFFTVSYVLLAAFVGAFADSMPKWRVMFISNTIKIV GCSMMFFGAHPLAAYAVVGLGAAAYSPAKYGILTEYLPHRLLVVANGWIEGLTVGAIILGVVIGGTLIRPEVAQHLLSFD FPLFDTGVDTVGEMALSIVAVLYVLAAIFNLYVPDTGVDHKQLKKNPIFLIHEFNHCLALLWRDKLGQISLAVTTLFWGA GATLQFIVIKWAEVALGLGLSKASMLQGVVAVGVAAGAIIAAKFITLRKSVRVIPLGIAMGLIVLVMNFVGSLWLAVPLL IIIGGLSGFFVVPMNALLQHRGHILMGAGHSIAVQNFNENISILIMTGLYYLMIKMDLSIYWVVTMFGLFVSGLMYMIRQ RHFANQAAQDDVQHLDDSAHH
Sequences:
>Translated_421_residues MPFGFYIIMAAQFFSALADNALLIAAIAALREMHAPSEYEPLLKTFFTVSYVLLAAFVGAFADSMPKWRVMFISNTIKIV GCSMMFFGAHPLAAYAVVGLGAAAYSPAKYGILTEYLPHRLLVVANGWIEGLTVGAIILGVVIGGTLIRPEVAQHLLSFD FPLFDTGVDTVGEMALSIVAVLYVLAAIFNLYVPDTGVDHKQLKKNPIFLIHEFNHCLALLWRDKLGQISLAVTTLFWGA GATLQFIVIKWAEVALGLGLSKASMLQGVVAVGVAAGAIIAAKFITLRKSVRVIPLGIAMGLIVLVMNFVGSLWLAVPLL IIIGGLSGFFVVPMNALLQHRGHILMGAGHSIAVQNFNENISILIMTGLYYLMIKMDLSIYWVVTMFGLFVSGLMYMIRQ RHFANQAAQDDVQHLDDSAHH >Mature_420_residues PFGFYIIMAAQFFSALADNALLIAAIAALREMHAPSEYEPLLKTFFTVSYVLLAAFVGAFADSMPKWRVMFISNTIKIVG CSMMFFGAHPLAAYAVVGLGAAAYSPAKYGILTEYLPHRLLVVANGWIEGLTVGAIILGVVIGGTLIRPEVAQHLLSFDF PLFDTGVDTVGEMALSIVAVLYVLAAIFNLYVPDTGVDHKQLKKNPIFLIHEFNHCLALLWRDKLGQISLAVTTLFWGAG ATLQFIVIKWAEVALGLGLSKASMLQGVVAVGVAAGAIIAAKFITLRKSVRVIPLGIAMGLIVLVMNFVGSLWLAVPLLI IIGGLSGFFVVPMNALLQHRGHILMGAGHSIAVQNFNENISILIMTGLYYLMIKMDLSIYWVVTMFGLFVSGLMYMIRQR HFANQAAQDDVQHLDDSAHH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=403, Percent_Identity=39.454094292804, Blast_Score=238, Evalue=4e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45744; Mature: 45613
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFGFYIIMAAQFFSALADNALLIAAIAALREMHAPSEYEPLLKTFFTVSYVLLAAFVGA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FADSMPKWRVMFISNTIKIVGCSMMFFGAHPLAAYAVVGLGAAAYSPAKYGILTEYLPHR HHCCCCCEEEEEEECCEEHHHHHHHHHCCCHHHHHHHHHCCHHHCCCHHHHHHHHHCCCE LLVVANGWIEGLTVGAIILGVVIGGTLIRPEVAQHLLSFDFPLFDTGVDTVGEMALSIVA EEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHH VLYVLAAIFNLYVPDTGVDHKQLKKNPIFLIHEFNHCLALLWRDKLGQISLAVTTLFWGA HHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHCC GATLQFIVIKWAEVALGLGLSKASMLQGVVAVGVAAGAIIAAKFITLRKSVRVIPLGIAM CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHH GLIVLVMNFVGSLWLAVPLLIIIGGLSGFFVVPMNALLQHRGHILMGAGHSIAVQNFNEN HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCC ISILIMTGLYYLMIKMDLSIYWVVTMFGLFVSGLMYMIRQRHFANQAAQDDVQHLDDSAH EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC H C >Mature Secondary Structure PFGFYIIMAAQFFSALADNALLIAAIAALREMHAPSEYEPLLKTFFTVSYVLLAAFVGA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FADSMPKWRVMFISNTIKIVGCSMMFFGAHPLAAYAVVGLGAAAYSPAKYGILTEYLPHR HHCCCCCEEEEEEECCEEHHHHHHHHHCCCHHHHHHHHHCCHHHCCCHHHHHHHHHCCCE LLVVANGWIEGLTVGAIILGVVIGGTLIRPEVAQHLLSFDFPLFDTGVDTVGEMALSIVA EEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHH VLYVLAAIFNLYVPDTGVDHKQLKKNPIFLIHEFNHCLALLWRDKLGQISLAVTTLFWGA HHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHCC GATLQFIVIKWAEVALGLGLSKASMLQGVVAVGVAAGAIIAAKFITLRKSVRVIPLGIAM CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHH GLIVLVMNFVGSLWLAVPLLIIIGGLSGFFVVPMNALLQHRGHILMGAGHSIAVQNFNEN HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCC ISILIMTGLYYLMIKMDLSIYWVVTMFGLFVSGLMYMIRQRHFANQAAQDDVQHLDDSAH EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA