Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71907543

Identifier: 71907543

GI number: 71907543

Start: 2056737

End: 2057543

Strand: Reverse

Name: 71907543

Synonym: Daro_1914

Alternate gene names: NA

Gene position: 2057543-2056737 (Counterclockwise)

Preceding gene: 71907544

Following gene: 71907540

Centisome position: 45.71

GC content: 62.58

Gene sequence:

>807_bases
ATGCAAGTGTCCACAAAACCCCCTGTAATTCACCACCACCCAGCCCATCACCCAAGCACCAAGCCGCCGTTGCTTTTCGT
CCATGGTGGTTACAGCAACGCCGCGCTGTGGGGCGTTCGCTTCATTCCGTATTTCCAGGATCAGGGTTACGACTGCTACG
CGCTTGAGCTTTCCGGGCACGGCAGCCGACCGGCGGATCGGGTGCATCTGGACGATTTCGGCCTCGACGATTTCGTCGCA
GACCTGGCGGCTGCCGTGGCCAGTCTGCTCGCATTGCCGGTGCTGATTGCCCATTCGATGGGCTGTCTGGTTTGCCAACG
ATTTCTCGAACGGGGCACGGCGCGGGCCGTGGCTTTCCTGGCGCCGGTGCCGCCGACCGGAACGGGGGGCACGGTCAGCC
GCTTCGCGATGACCATGCCGGATTTCTTTGCCGAGTTGCCGAATGCGGTCAACGGCACGGCCAGCGAAAAAACCATGCGC
ACGATGGCCAGTGTCTATTTTTCGCCAAGCATGGCGCCGGAAGAAACCGTCCAGTATCTGCCGCTGATCCAGCCGGAATC
GGAAAAGGCAGTGGCCGAAATGCTGACTGCGCCCTTGCGCATCGCCCGTGGCCGGGCGCGCATTCCAGCGCTGGTCATGG
GCGGTTCGGCCGACCAGGTCTTCCCGGCCTCAATGCTTCACTTCACGGCTGCCTCGTGGAATGCCAAAACGCAGGTCATT
GCGGGGGCCGGCCACATGCTGATGCTCGACCCGCAATGGCCGGACGCCGCCGTCCAGCTTGAGGAATGGCTGGATAGCCT
GAACTGA

Upstream 100 bases:

>100_bases
AGACGTTAGGCAATTCGCATAAACAAAGGGGTCGGAGTGAATTAAGAATCAAAATAACGAAGCTATCTCTATCTGCCCCC
CCCCTCTTTTAACCAAGAAT

Downstream 100 bases:

>100_bases
CTGATCAAATTGGGCGGAGCAAATTCGAATCCTTTTTTGCTCCGCCCATTTTTTATTCAGCCACCCTCGCCCACGGCACC
ATTGCCATGACTCAGGCTGA

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Or Acyltransferase; Acetone-Cyanohydrin Lyase; Hydrolase

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGHGSRPADRVHLDDFGLDDFVA
DLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFLAPVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMR
TMASVYFSPSMAPEETVQYLPLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI
AGAGHMLMLDPQWPDAAVQLEEWLDSLN

Sequences:

>Translated_268_residues
MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGHGSRPADRVHLDDFGLDDFVA
DLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFLAPVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMR
TMASVYFSPSMAPEETVQYLPLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI
AGAGHMLMLDPQWPDAAVQLEEWLDSLN
>Mature_268_residues
MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGHGSRPADRVHLDDFGLDDFVA
DLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFLAPVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMR
TMASVYFSPSMAPEETVQYLPLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI
AGAGHMLMLDPQWPDAAVQLEEWLDSLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28948; Mature: 28948

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGH
CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEEHHEEEEEEECCCCCEEEEEEECCC
GSRPADRVHLDDFGLDDFVADLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFL
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEE
APVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMRTMASVYFSPSMAPEETVQYL
ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC
PLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE
AGAGHMLMLDPQWPDAAVQLEEWLDSLN
ECCCCEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGH
CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEEHHEEEEEEECCCCCEEEEEEECCC
GSRPADRVHLDDFGLDDFVADLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFL
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEE
APVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMRTMASVYFSPSMAPEETVQYL
ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC
PLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE
AGAGHMLMLDPQWPDAAVQLEEWLDSLN
ECCCCEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA