Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is modD [H]

Identifier: 71907107

GI number: 71907107

Start: 1596634

End: 1597479

Strand: Reverse

Name: modD [H]

Synonym: Daro_1475

Alternate gene names: 71907107

Gene position: 1597479-1596634 (Counterclockwise)

Preceding gene: 71907108

Following gene: 71907106

Centisome position: 35.49

GC content: 66.67

Gene sequence:

>846_bases
ATGAGCCCCTACACTTTGCCCGACCGCGCGCTCGAAGCCCTGCTCGCCGACGACGCTCCGCAGGGCGATGCCACCACCTT
CGCCCTCGGCATCGGCGACCAGCCCGGGCGCATGGTCTTTCGCGCCCGTTACGACATGGTGCTGTGCGGCAGCGAAGAAG
CCCGGCGGATGGGCGAATTGCGTGGCCTGAAGGCAAGCGGGCTGATCGCCGCCAGCGGTAGCGCCCTGCAAGCCGGCCAG
ATCATCCTGACGCTGGAAGGTTCGGCCAGCGGACTGCATATGGTCTGGAAAACAGCCCAGACGCTGATCGAATACCTGTC
CGGCATCGCCTCGTCGGCTGCCACCATTCTCGCCGCAGCGCGAGTCGCCAATCCCGACATCGGCATTGCCTGCACCCGCA
AGAACTTCCCCGGCACCAAGGCCGCGGCGATCAAGGCCATCCTGTGCGGCGGCGCCAGCCCGCACCGCTTGAGTTTGTCG
GAAACCCTACTCGTTTTCGCCGAGCATCGTGCCTTTCTGGACAATGAAGCACCGGCCGCAACGGTCCGTCGCCTGCGCCG
GCAATGGCCGGAACGTGCCATCGTCGTCGAGCTTGCCGACGAGGACGAAGCCCTGCTCTGGGCAAGGGCTGGCGCCGATA
TCCTGCAGCTGGAAAAACTGTCGCCGGAGGCCGTCACCCGCTTGCGCCAGACACTGGGCGACTGCCCGGCCCGCATCGCG
GCCGCCGGCGGCATAAATTCTGCTAACGCTGAAGCGTATGCACGGGCCGGGGCCGACATTCTGGTCACTTCGGCGCCGTA
TTTCGCTCCGCCGCGTGACGTGGCGGTCACCCTCAGCCCCCTGTGA

Upstream 100 bases:

>100_bases
GCTGCCACCGCGCTGCTCAATTACCTGAAGAGCGAAAAGGCGCTGGCCGTCATCAAGTCCTTCGGTTACGAATTGCGCTG
ATTCGTCCGGCTTTGCGGCG

Downstream 100 bases:

>100_bases
ACGCCCATGAAAATCGCCATCGCCACCCAGGATTTCGCCAAAGTCAGCGGCCACGCCGGCCAGGCCCGCCAATGGCTGCT
CTACGACCTGAGTCTCCATC

Product: putative molybdenum utilization protein ModD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSPYTLPDRALEALLADDAPQGDATTFALGIGDQPGRMVFRARYDMVLCGSEEARRMGELRGLKASGLIAASGSALQAGQ
IILTLEGSASGLHMVWKTAQTLIEYLSGIASSAATILAAARVANPDIGIACTRKNFPGTKAAAIKAILCGGASPHRLSLS
ETLLVFAEHRAFLDNEAPAATVRRLRRQWPERAIVVELADEDEALLWARAGADILQLEKLSPEAVTRLRQTLGDCPARIA
AAGGINSANAEAYARAGADILVTSAPYFAPPRDVAVTLSPL

Sequences:

>Translated_281_residues
MSPYTLPDRALEALLADDAPQGDATTFALGIGDQPGRMVFRARYDMVLCGSEEARRMGELRGLKASGLIAASGSALQAGQ
IILTLEGSASGLHMVWKTAQTLIEYLSGIASSAATILAAARVANPDIGIACTRKNFPGTKAAAIKAILCGGASPHRLSLS
ETLLVFAEHRAFLDNEAPAATVRRLRRQWPERAIVVELADEDEALLWARAGADILQLEKLSPEAVTRLRQTLGDCPARIA
AAGGINSANAEAYARAGADILVTSAPYFAPPRDVAVTLSPL
>Mature_280_residues
SPYTLPDRALEALLADDAPQGDATTFALGIGDQPGRMVFRARYDMVLCGSEEARRMGELRGLKASGLIAASGSALQAGQI
ILTLEGSASGLHMVWKTAQTLIEYLSGIASSAATILAAARVANPDIGIACTRKNFPGTKAAAIKAILCGGASPHRLSLSE
TLLVFAEHRAFLDNEAPAATVRRLRRQWPERAIVVELADEDEALLWARAGADILQLEKLSPEAVTRLRQTLGDCPARIAA
AGGINSANAEAYARAGADILVTSAPYFAPPRDVAVTLSPL

Specific function: NAD biosynthesis; aspartate to NaMN; third (last) step. [C]

COG id: COG0157

COG function: function code H; Nicotinate-nucleotide pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nadC/modD family [H]

Homologues:

Organism=Escherichia coli, GI1786299, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321162, Length=268, Percent_Identity=26.4925373134328, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006242
- InterPro:   IPR002638
- InterPro:   IPR022412 [H]

Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]

EC number: 2.4.2.-

Molecular weight: Translated: 29557; Mature: 29426

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPYTLPDRALEALLADDAPQGDATTFALGIGDQPGRMVFRARYDMVLCGSEEARRMGEL
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEECCHHHHHHHHH
RGLKASGLIAASGSALQAGQIILTLEGSASGLHMVWKTAQTLIEYLSGIASSAATILAAA
CCCCCCCEEEECCCCEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVANPDIGIACTRKNFPGTKAAAIKAILCGGASPHRLSLSETLLVFAEHRAFLDNEAPAA
HHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCCHH
TVRRLRRQWPERAIVVELADEDEALLWARAGADILQLEKLSPEAVTRLRQTLGDCPARIA
HHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEHHHCCCHHHHHHHHHHHCCCCHHHH
AAGGINSANAEAYARAGADILVTSAPYFAPPRDVAVTLSPL
HCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SPYTLPDRALEALLADDAPQGDATTFALGIGDQPGRMVFRARYDMVLCGSEEARRMGEL
CCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEECCHHHHHHHHH
RGLKASGLIAASGSALQAGQIILTLEGSASGLHMVWKTAQTLIEYLSGIASSAATILAAA
CCCCCCCEEEECCCCEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVANPDIGIACTRKNFPGTKAAAIKAILCGGASPHRLSLSETLLVFAEHRAFLDNEAPAA
HHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCCHH
TVRRLRRQWPERAIVVELADEDEALLWARAGADILQLEKLSPEAVTRLRQTLGDCPARIA
HHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEHHHCCCHHHHHHHHHHHCCCCHHHH
AAGGINSANAEAYARAGADILVTSAPYFAPPRDVAVTLSPL
HCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA