Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71907106

Identifier: 71907106

GI number: 71907106

Start: 1596235

End: 1596627

Strand: Reverse

Name: 71907106

Synonym: Daro_1474

Alternate gene names: NA

Gene position: 1596627-1596235 (Counterclockwise)

Preceding gene: 71907107

Following gene: 71907103

Centisome position: 35.47

GC content: 66.67

Gene sequence:

>393_bases
ATGAAAATCGCCATCGCCACCCAGGATTTCGCCAAAGTCAGCGGCCACGCCGGCCAGGCCCGCCAATGGCTGCTCTACGA
CCTGAGTCTCCATCATGCCAACCGGCTGCTGCCGGCGCCACAGCGCATCGACCTGGACCAGGATCAGGTCCTGCACGTCT
TCACCGATGACCGCCCGCACCCACTCGACGGCGTCGATGTCGTGATCGCCGCCAGCGCTGGCGACGGCTTCATCCGTCAC
ATGCGCAAACGCGGCACCGACGTGCTGCTCACCGGCGAGACCGATCCGGCCGTCGCCATCACGCGCATCCTGGCCGGCGA
AGCGCTGCCCGATCCGCGCTTCGACCTCACGACCACGCTGTGCCGCATCCGCGACCTGTTTTCGCGCTACTGA

Upstream 100 bases:

>100_bases
AGCGTATGCACGGGCCGGGGCCGACATTCTGGTCACTTCGGCGCCGTATTTCGCTCCGCCGCGTGACGTGGCGGTCACCC
TCAGCCCCCTGTGAACGCCC

Downstream 100 bases:

>100_bases
CCGGGCGCCACAAAGCGGGCGCTACAGCACCGCTTCAAACAACTCCAGCTGCGGCGGCCCGAGGTAGAAATCGCGTGGCG
ACTGGCCGGCCTGCATGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Nitrogenase Accessory Factor; Nitrogen Fixation-Like Protein; Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis Protein

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKIAIATQDFAKVSGHAGQARQWLLYDLSLHHANRLLPAPQRIDLDQDQVLHVFTDDRPHPLDGVDVVIAASAGDGFIRH
MRKRGTDVLLTGETDPAVAITRILAGEALPDPRFDLTTTLCRIRDLFSRY

Sequences:

>Translated_130_residues
MKIAIATQDFAKVSGHAGQARQWLLYDLSLHHANRLLPAPQRIDLDQDQVLHVFTDDRPHPLDGVDVVIAASAGDGFIRH
MRKRGTDVLLTGETDPAVAITRILAGEALPDPRFDLTTTLCRIRDLFSRY
>Mature_130_residues
MKIAIATQDFAKVSGHAGQARQWLLYDLSLHHANRLLPAPQRIDLDQDQVLHVFTDDRPHPLDGVDVVIAASAGDGFIRH
MRKRGTDVLLTGETDPAVAITRILAGEALPDPRFDLTTTLCRIRDLFSRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14480; Mature: 14480

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIATQDFAKVSGHAGQARQWLLYDLSLHHANRLLPAPQRIDLDQDQVLHVFTDDRPH
CEEEEECCHHHHHCCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCHHHEEEEEECCCCC
PLDGVDVVIAASAGDGFIRHMRKRGTDVLLTGETDPAVAITRILAGEALPDPRFDLTTTL
CCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHH
CRIRDLFSRY
HHHHHHHHCC
>Mature Secondary Structure
MKIAIATQDFAKVSGHAGQARQWLLYDLSLHHANRLLPAPQRIDLDQDQVLHVFTDDRPH
CEEEEECCHHHHHCCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCHHHEEEEEECCCCC
PLDGVDVVIAASAGDGFIRHMRKRGTDVLLTGETDPAVAITRILAGEALPDPRFDLTTTL
CCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHH
CRIRDLFSRY
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA