Click here to switch to the map view.

The map label for this gene is rnfG [H]

Identifier: 71906798

GI number: 71906798

Start: 1263625

End: 1264293

Strand: Reverse

Name: rnfG [H]

Synonym: Daro_1159

Alternate gene names: 71906798

Gene position: 1264293-1263625 (Counterclockwise)

Preceding gene: 71906799

Following gene: 71906797

Centisome position: 28.09

GC content: 59.04

Gene sequence:

>669_bases
ATGGTGACGTTCAAGGAACCCACTGCCACTGGCATGGCCACGCGCACGTCGGTCATTCTGGTACTGTTCGTCGCCGCTTT
TACTGCCGCCTTGGCGATTGTCTACAACATGACCAAGCCAGCGATCGATGCCTCGGCCGCTGAAGAAAAGATGCGGACGA
TCAACGAGGTCTTGCCGAACGATCTGTACGACAACGAATTACTGGCTGATACCCTGACCCTGCCGGCCACCCCGGAGCTG
GGTCAGGAGGACGAATCCACCATCTATCGGGCACGTCTCAAGGGCGAGCCTTCCACGTTGGTGCTGGAAGCCGTCGCCCC
GGATGGTTATGCCGGCAAGATTCGCATGCTGCTGGCCATTCGCGCCAATGGTGAAGTCGCTGGTGTTCGTGTCACGCTGC
ACAAGGAAACCCCGGGACTGGGTGACTATATCGAACCCAAGAAGGACAAGAACAAGACCCGGCCATGGATTACCCAGTTC
AACGGCCTGTCCATCGAAAAGATGCCGACCGCCAACGAATGGAAGGTCAAGAAGGATGGGGGACACTTCGACTCCATCGC
CGGTGCCACCGTCACGCCGCGCGCCGTGACCAAGGCCGTGTACAAAGCCGTAAAGTTCGCCACCGAAAACCGCGAACGCC
TGTTCGCGCCGAAGAGCGCCAAGGAGTAG

Upstream 100 bases:

>100_bases
CCCGATGGCGTTGCATTCGCCGTACTGCTTTTCAATATCTGCGTACCGTTGATCGACATGTACACCCAGCCTCCCGTATT
CGGCATGAAGGACCAGTGAC

Downstream 100 bases:

>100_bases
AGCCATGTTGATCACGCTCAGCGAAATCAAGCAGATTTCCCTCAACGGAGTCTGGAAGCAGAACAGCAGCCTGGTCCAGA
TTCTCGGCATGTGTCCGCTG

Product: electron transport complex, RnfABCDGE type, G subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVTFKEPTATGMATRTSVILVLFVAAFTAALAIVYNMTKPAIDASAAEEKMRTINEVLPNDLYDNELLADTLTLPATPEL
GQEDESTIYRARLKGEPSTLVLEAVAPDGYAGKIRMLLAIRANGEVAGVRVTLHKETPGLGDYIEPKKDKNKTRPWITQF
NGLSIEKMPTANEWKVKKDGGHFDSIAGATVTPRAVTKAVYKAVKFATENRERLFAPKSAKE

Sequences:

>Translated_222_residues
MVTFKEPTATGMATRTSVILVLFVAAFTAALAIVYNMTKPAIDASAAEEKMRTINEVLPNDLYDNELLADTLTLPATPEL
GQEDESTIYRARLKGEPSTLVLEAVAPDGYAGKIRMLLAIRANGEVAGVRVTLHKETPGLGDYIEPKKDKNKTRPWITQF
NGLSIEKMPTANEWKVKKDGGHFDSIAGATVTPRAVTKAVYKAVKFATENRERLFAPKSAKE
>Mature_222_residues
MVTFKEPTATGMATRTSVILVLFVAAFTAALAIVYNMTKPAIDASAAEEKMRTINEVLPNDLYDNELLADTLTLPATPEL
GQEDESTIYRARLKGEPSTLVLEAVAPDGYAGKIRMLLAIRANGEVAGVRVTLHKETPGLGDYIEPKKDKNKTRPWITQF
NGLSIEKMPTANEWKVKKDGGHFDSIAGATVTPRAVTKAVYKAVKFATENRERLFAPKSAKE

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family [H]

Homologues:

Organism=Escherichia coli, GI1787918, Length=193, Percent_Identity=43.5233160621762, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 24253; Mature: 24253

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTFKEPTATGMATRTSVILVLFVAAFTAALAIVYNMTKPAIDASAAEEKMRTINEVLPN
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
DLYDNELLADTLTLPATPELGQEDESTIYRARLKGEPSTLVLEAVAPDGYAGKIRMLLAI
CCCCCHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEE
RANGEVAGVRVTLHKETPGLGDYIEPKKDKNKTRPWITQFNGLSIEKMPTANEWKVKKDG
ECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEECCC
GHFDSIAGATVTPRAVTKAVYKAVKFATENRERLFAPKSAKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCCCCC
>Mature Secondary Structure
MVTFKEPTATGMATRTSVILVLFVAAFTAALAIVYNMTKPAIDASAAEEKMRTINEVLPN
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
DLYDNELLADTLTLPATPELGQEDESTIYRARLKGEPSTLVLEAVAPDGYAGKIRMLLAI
CCCCCHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEE
RANGEVAGVRVTLHKETPGLGDYIEPKKDKNKTRPWITQFNGLSIEKMPTANEWKVKKDG
ECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEECCC
GHFDSIAGATVTPRAVTKAVYKAVKFATENRERLFAPKSAKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA