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The map label for this gene is yfgB [C]

Identifier: 71906796

GI number: 71906796

Start: 1261812

End: 1262885

Strand: Reverse

Name: yfgB [C]

Synonym: Daro_1157

Alternate gene names: 71906796

Gene position: 1262885-1261812 (Counterclockwise)

Preceding gene: 71906797

Following gene: 71906794

Centisome position: 28.06

GC content: 60.8

Gene sequence:

>1074_bases
ATGCGACTCGAAACCATCCGCCAATCCATGCGAGCCACCGGCGCCAAGGATTGCCACATCGACCGGGTACTGCGCGCCTG
GACTCAGGCCAAGCCGCTTGAATCCGGGGCTCGCCGCCACCAGCCCGAGAATTTTCTGCCGCAGGCCCTGCGCACGGCGC
TCCCCGCCCTGCAAGAAGAACTCTCGGCACTGGCTCGCGTCCGCTCGGAACATCCGGGTGAAGATGGTTCATCACGCCTG
CTGGTTGAACTGGCGGATGGTCAAACCGTCGAAAGCGTGCTGCTGCCGCGTGATGGCCTGTGTATTTCAACCCAGATCGG
CTGCGCCGTTGGCTGTACGTTCTGCATGACCGGCCGTGACGGCCTGCTCCGTCAGGTCAGCAGCGCTGAAATGGTAGCGC
AGGTGGTCCTCGGTCGAGGCCGACGCAAAGTGACGCGCGTTGTGTTCATGGGCATGGGCGAGCCCTCGCACAACATGGAC
AACGTGCTTGAGGCGATCGATACGCTGGGCACCTACGGCGGAATCGGTCACAAGAATCTGGTTTTTTCAACGGTGGGTGA
CCGCCGGGTTTTTGACCGATTGCCGCAACAACGCGTCGTCCCGGCACTTGCCCTTTCGCTGCACTCAACCCGAGCCGAAT
TGCGGGCCGAACTGCTGCCCAAGGCTCCCCACATCGACCCGACCGAACTGGTTGAACTGGCTGAGCATTACGCGCGAACG
ACCGGCTATCCGATCCAGTACCAATGGACGCTGATCGATGGCATCAACGACAGCATCGAAGAAATGGACGGCATCGTCCG
GCTGCTCACGGGGAAGTATGCGATCATGAATCTGATCCCTTACAACGCGACGGCTACGCTGGATTATCGCCGCCCGTCAC
TCGAGCACATCACCACGCTGACCAAATACCTGCATGCCAAAGGGATCAGGACCACCGTACGCAACTCGGCCGGACAGGAT
GTCGATGGCGGCTGCGGCCAGTTACGGGCACGCACGCTGGATGCAGGCACGGCCACTGATGCTCAAAAAATCTCGCTGAA
ACACCTGAAGACAGGTACCCGATCAGCCGCTTAA

Upstream 100 bases:

>100_bases
CGCCCAGCGAGCCCAGTTGCCTCCCCCCGCCCCCGTTGCTGCCGGCGGCTGCCACTAATCACCCAGCGCAGCCCATTGCG
GGCCTGAGGAAAACGCCCGC

Downstream 100 bases:

>100_bases
GCCAGCCATGACAACGCAGTTCTTGCCGCGCGCCTTGGCCATATAGCATGCTTCGTCAGCTCGCCGAACCAGCGATGCCT
CGCTCTCGCCGGGCACGCAT

Product: ribosomal RNA large subunit methyltransferase N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRLETIRQSMRATGAKDCHIDRVLRAWTQAKPLESGARRHQPENFLPQALRTALPALQEELSALARVRSEHPGEDGSSRL
LVELADGQTVESVLLPRDGLCISTQIGCAVGCTFCMTGRDGLLRQVSSAEMVAQVVLGRGRRKVTRVVFMGMGEPSHNMD
NVLEAIDTLGTYGGIGHKNLVFSTVGDRRVFDRLPQQRVVPALALSLHSTRAELRAELLPKAPHIDPTELVELAEHYART
TGYPIQYQWTLIDGINDSIEEMDGIVRLLTGKYAIMNLIPYNATATLDYRRPSLEHITTLTKYLHAKGIRTTVRNSAGQD
VDGGCGQLRARTLDAGTATDAQKISLKHLKTGTRSAA

Sequences:

>Translated_357_residues
MRLETIRQSMRATGAKDCHIDRVLRAWTQAKPLESGARRHQPENFLPQALRTALPALQEELSALARVRSEHPGEDGSSRL
LVELADGQTVESVLLPRDGLCISTQIGCAVGCTFCMTGRDGLLRQVSSAEMVAQVVLGRGRRKVTRVVFMGMGEPSHNMD
NVLEAIDTLGTYGGIGHKNLVFSTVGDRRVFDRLPQQRVVPALALSLHSTRAELRAELLPKAPHIDPTELVELAEHYART
TGYPIQYQWTLIDGINDSIEEMDGIVRLLTGKYAIMNLIPYNATATLDYRRPSLEHITTLTKYLHAKGIRTTVRNSAGQD
VDGGCGQLRARTLDAGTATDAQKISLKHLKTGTRSAA
>Mature_357_residues
MRLETIRQSMRATGAKDCHIDRVLRAWTQAKPLESGARRHQPENFLPQALRTALPALQEELSALARVRSEHPGEDGSSRL
LVELADGQTVESVLLPRDGLCISTQIGCAVGCTFCMTGRDGLLRQVSSAEMVAQVVLGRGRRKVTRVVFMGMGEPSHNMD
NVLEAIDTLGTYGGIGHKNLVFSTVGDRRVFDRLPQQRVVPALALSLHSTRAELRAELLPKAPHIDPTELVELAEHYART
TGYPIQYQWTLIDGINDSIEEMDGIVRLLTGKYAIMNLIPYNATATLDYRRPSLEHITTLTKYLHAKGIRTTVRNSAGQD
VDGGCGQLRARTLDAGTATDAQKISLKHLKTGTRSAA

Specific function: Unknown

COG id: COG0820

COG function: function code R; Predicted Fe-S-cluster redox enzyme

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. RlmN family

Homologues:

Organism=Escherichia coli, GI1788865, Length=301, Percent_Identity=31.5614617940199, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1157_DECAR (Q47GW8)

Other databases:

- EMBL:   CP000089
- RefSeq:   YP_284383.1
- STRING:   Q47GW8
- GeneID:   3570117
- GenomeReviews:   CP000089_GR
- KEGG:   dar:Daro_1157
- NMPDR:   fig|159087.4.peg.743
- eggNOG:   COG0820
- HOGENOM:   HBG335345
- OMA:   GGCGQLR
- ProtClustDB:   PRK14464
- BioCyc:   DARO159087:DARO_1157-MONOMER
- GO:   GO:0005737
- InterPro:   IPR004383
- PIRSF:   PIRSF006004

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39194; Mature: 39194

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLETIRQSMRATGAKDCHIDRVLRAWTQAKPLESGARRHQPENFLPQALRTALPALQEE
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSALARVRSEHPGEDGSSRLLVELADGQTVESVLLPRDGLCISTQIGCAVGCTFCMTGRD
HHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEECHHHHHHHHHEECCCH
GLLRQVSSAEMVAQVVLGRGRRKVTRVVFMGMGEPSHNMDNVLEAIDTLGTYGGIGHKNL
HHHHHHHHHHHHHHHHHCCCHHHEEHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCE
VFSTVGDRRVFDRLPQQRVVPALALSLHSTRAELRAELLPKAPHIDPTELVELAEHYART
EEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TGYPIQYQWTLIDGINDSIEEMDGIVRLLTGKYAIMNLIPYNATATLDYRRPSLEHITTL
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHEECCCCEEEEECCCCCHHHHHHH
TKYLHAKGIRTTVRNSAGQDVDGGCGQLRARTLDAGTATDAQKISLKHLKTGTRSAA
HHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLETIRQSMRATGAKDCHIDRVLRAWTQAKPLESGARRHQPENFLPQALRTALPALQEE
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSALARVRSEHPGEDGSSRLLVELADGQTVESVLLPRDGLCISTQIGCAVGCTFCMTGRD
HHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEECHHHHHHHHHEECCCH
GLLRQVSSAEMVAQVVLGRGRRKVTRVVFMGMGEPSHNMDNVLEAIDTLGTYGGIGHKNL
HHHHHHHHHHHHHHHHHCCCHHHEEHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCE
VFSTVGDRRVFDRLPQQRVVPALALSLHSTRAELRAELLPKAPHIDPTELVELAEHYART
EEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TGYPIQYQWTLIDGINDSIEEMDGIVRLLTGKYAIMNLIPYNATATLDYRRPSLEHITTL
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHEECCCCEEEEECCCCCHHHHHHH
TKYLHAKGIRTTVRNSAGQDVDGGCGQLRARTLDAGTATDAQKISLKHLKTGTRSAA
HHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHEECCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA