Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71906697

Identifier: 71906697

GI number: 71906697

Start: 1161747

End: 1161950

Strand: Reverse

Name: 71906697

Synonym: Daro_1058

Alternate gene names: NA

Gene position: 1161950-1161747 (Counterclockwise)

Preceding gene: 71906700

Following gene: 71906686

Centisome position: 25.81

GC content: 66.67

Gene sequence:

>204_bases
ATGTACGTATGCGTCTGCCAGGCAGTCACCGACCGCCAGATTCGTGAAGCCGCCCAAGGCGGTGCCCGCACGCTGAAGGA
TCTGCGCCGAGATCTCGGCGTGACCCGCGATTGTGGCCGCTGCGCTTCCTGCGCGCACGACTGCCTGCGTGAAGTTCATG
GTGATTCGGCCAAACCCGGCAAGGCCACGCGCCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
CATAATATTTTCGGGAAAAACAAAAAGCGTATTGACATTCATTCTCATTTAAATAGAATGAGAATTGTTCTCAACCAATA
CCGTTCGTGGAGTCCCGTTC

Downstream 100 bases:

>100_bases
TTTTCACAAACAGTTGTCAGCATGAACAACGGGAGCCGATTGGCTCCCGTTTTGTTTTACACCCAATGTCCCGCTCAGGC
CTCGCCGATCAAGGCCCAGT

Product: BFD-like (2Fe-2S)-binding region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MYVCVCQAVTDRQIREAAQGGARTLKDLRRDLGVTRDCGRCASCAHDCLREVHGDSAKPGKATRRAA

Sequences:

>Translated_67_residues
MYVCVCQAVTDRQIREAAQGGARTLKDLRRDLGVTRDCGRCASCAHDCLREVHGDSAKPGKATRRAA
>Mature_67_residues
MYVCVCQAVTDRQIREAAQGGARTLKDLRRDLGVTRDCGRCASCAHDCLREVHGDSAKPGKATRRAA

Specific function: Unknown

COG id: COG2906

COG function: function code P; Bacterioferritin-associated ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7275; Mature: 7275

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
9.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVCVCQAVTDRQIREAAQGGARTLKDLRRDLGVTRDCGRCASCAHDCLREVHGDSAKPG
CEEEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
KATRRAA
CCCCCCC
>Mature Secondary Structure
MYVCVCQAVTDRQIREAAQGGARTLKDLRRDLGVTRDCGRCASCAHDCLREVHGDSAKPG
CEEEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
KATRRAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA