| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is bfr2 [H]
Identifier: 71906700
GI number: 71906700
Start: 1163819
End: 1164301
Strand: Reverse
Name: bfr2 [H]
Synonym: Daro_1061
Alternate gene names: 71906700
Gene position: 1164301-1163819 (Counterclockwise)
Preceding gene: 71906701
Following gene: 71906697
Centisome position: 25.87
GC content: 55.49
Gene sequence:
>483_bases ATGAAAGGCGACAAGAAAGTCATCGAAGCCCTGAACAAGGTGCTGAAGAACGAGCTGACCTCGATCAACCAGTATTTCCT GCATGCCCGCATGTTCCGCAACTGGGGCCTGGAAAAGCTCAACGACTACCAGTACAAGCAGTCGATCCGCGTCATGAAGG AAGCTGACGAAGTGATCGAACGCGTCCTTTTCCTCGAAGGCCTGCCCAACCTGCAAAACCTCGGCAAGCTGCTAATCGGC GAAGATGTGGTCGAGTGCCTGCAGGGCGACCTGAAATACGAGCGTGAAATCCAGCGCCCGTTGCTTGTCGAATCCATTGC CCTGTGCGAAGAGCTGCAGGATTACGTCAGCCGCGACCTGCTCGAAGAACTGCTCGAACATTGCGAAGAAGCCATCGACT GGCTGGAAACCCAACAAAGCCTGATCGAGAATGTGACCCTGCCGAACTATCTGCAGGCCCACATGGAGCCGGGCGGCGAC TAA
Upstream 100 bases:
>100_bases CTACTTCCTCGAAAAGCAGATGAAACTGATCGAGCTGGTCGGCCTGCAAAACTACCTGCAGAGCCAGATGGGCTCCGGCA ACCCGGCTTAAGGAGCGACC
Downstream 100 bases:
>100_bases TCCCTCACGCCTCCCGTGCCAGCCGCAGCGAATGCTGCGGCTTTTTTTACACCTGAATCATGGGCAAGTCGCCGGATCGC TGGCGTAGGTATCCAGACCA
Product: bacterioferritin
Products: NA
Alternate protein names: BFR 2 [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKGDKKVIEALNKVLKNELTSINQYFLHARMFRNWGLEKLNDYQYKQSIRVMKEADEVIERVLFLEGLPNLQNLGKLLIG EDVVECLQGDLKYEREIQRPLLVESIALCEELQDYVSRDLLEELLEHCEEAIDWLETQQSLIENVTLPNYLQAHMEPGGD
Sequences:
>Translated_160_residues MKGDKKVIEALNKVLKNELTSINQYFLHARMFRNWGLEKLNDYQYKQSIRVMKEADEVIERVLFLEGLPNLQNLGKLLIG EDVVECLQGDLKYEREIQRPLLVESIALCEELQDYVSRDLLEELLEHCEEAIDWLETQQSLIENVTLPNYLQAHMEPGGD >Mature_160_residues MKGDKKVIEALNKVLKNELTSINQYFLHARMFRNWGLEKLNDYQYKQSIRVMKEADEVIERVLFLEGLPNLQNLGKLLIG EDVVECLQGDLKYEREIQRPLLVESIALCEELQDYVSRDLLEELLEHCEEAIDWLETQQSLIENVTLPNYLQAHMEPGGD
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=159, Percent_Identity=58.4905660377358, Blast_Score=177, Evalue=4e-46,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18692; Mature: 18692
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDKKVIEALNKVLKNELTSINQYFLHARMFRNWGLEKLNDYQYKQSIRVMKEADEVIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RVLFLEGLPNLQNLGKLLIGEDVVECLQGDLKYEREIQRPLLVESIALCEELQDYVSRDL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEELLEHCEEAIDWLETQQSLIENVTLPNYLQAHMEPGGD HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure MKGDKKVIEALNKVLKNELTSINQYFLHARMFRNWGLEKLNDYQYKQSIRVMKEADEVIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RVLFLEGLPNLQNLGKLLIGEDVVECLQGDLKYEREIQRPLLVESIALCEELQDYVSRDL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEELLEHCEEAIDWLETQQSLIENVTLPNYLQAHMEPGGD HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9409768 [H]