| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906616
Identifier: 71906616
GI number: 71906616
Start: 1068996
End: 1069571
Strand: Reverse
Name: 71906616
Synonym: Daro_0977
Alternate gene names: NA
Gene position: 1069571-1068996 (Counterclockwise)
Preceding gene: 71906617
Following gene: 71906615
Centisome position: 23.76
GC content: 61.46
Gene sequence:
>576_bases ATGGCCGAAGCTGACGGATTACTCCCCGATCCAGTACCCGACCACCCATTATTGCGAGGCCGTCGCGAGATCGGCCGCGG TGAAAGCACCATCGTGCTTGAAGCCGACACCGTCGATGGCCAGGAACGTGTCTACAAGGTCCTTTCCTCACCGACCGACT ACGCCTACTACACGGCCGAAGACCGCCCGACCGGCAACCACTTCCCGGTGGTTTACGCCGACCACGGCACGGCCGGCCGT TCCAGTCGCGGCTTTCCCTTTCACATTGTCGAGGTCGAGCGACTTTATCCGCTCCCCGGCACCGGCGAGGCGGTCGAAGT CGCCACCAAGCTGTCCACCTCCTATTTCGACGCCTGCATGATGTGGCGCAATCTGGCGCAGGATATGGGGCGCATCGCCC TGCATCACTTGACGGTGACGCCGATGGGCTGGAGCGATGCGGTTCAGGAGTCGCTCAAGGCACTGGAAGTCTTTTCCGGC GAATACGGCGCCCTGCCGGACCTGATCAAAGCCGACAACCTGATGATGCGCAAGGATGGCACCCTGGTCTTTTCCGACCC GGTTTTCATGGAATGA
Upstream 100 bases:
>100_bases GACCAATCCGGCCGCTTCGTTGCGGCCAACCGGCAAAACGGGCTAAATCCATGTTGGCGGGAACTCTTCCCGCCAACATG TAGCCATTTCGGAGACCATC
Downstream 100 bases:
>100_bases CGCGATGACCATCAGCCAGGTTCAATACACCTCACGCAAACTGGCCGAACAGTTGCGGGGCACCCCCTACATGGCAGTGA TCTCGATCACCGACCCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAEADGLLPDPVPDHPLLRGRREIGRGESTIVLEADTVDGQERVYKVLSSPTDYAYYTAEDRPTGNHFPVVYADHGTAGR SSRGFPFHIVEVERLYPLPGTGEAVEVATKLSTSYFDACMMWRNLAQDMGRIALHHLTVTPMGWSDAVQESLKALEVFSG EYGALPDLIKADNLMMRKDGTLVFSDPVFME
Sequences:
>Translated_191_residues MAEADGLLPDPVPDHPLLRGRREIGRGESTIVLEADTVDGQERVYKVLSSPTDYAYYTAEDRPTGNHFPVVYADHGTAGR SSRGFPFHIVEVERLYPLPGTGEAVEVATKLSTSYFDACMMWRNLAQDMGRIALHHLTVTPMGWSDAVQESLKALEVFSG EYGALPDLIKADNLMMRKDGTLVFSDPVFME >Mature_190_residues AEADGLLPDPVPDHPLLRGRREIGRGESTIVLEADTVDGQERVYKVLSSPTDYAYYTAEDRPTGNHFPVVYADHGTAGRS SRGFPFHIVEVERLYPLPGTGEAVEVATKLSTSYFDACMMWRNLAQDMGRIALHHLTVTPMGWSDAVQESLKALEVFSGE YGALPDLIKADNLMMRKDGTLVFSDPVFME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21150; Mature: 21019
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEADGLLPDPVPDHPLLRGRREIGRGESTIVLEADTVDGQERVYKVLSSPTDYAYYTAE CCCCCCCCCCCCCCCHHHHCHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECC DRPTGNHFPVVYADHGTAGRSSRGFPFHIVEVERLYPLPGTGEAVEVATKLSTSYFDACM CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH MWRNLAQDMGRIALHHLTVTPMGWSDAVQESLKALEVFSGEYGALPDLIKADNLMMRKDG HHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCC TLVFSDPVFME CEEECCCCCCC >Mature Secondary Structure AEADGLLPDPVPDHPLLRGRREIGRGESTIVLEADTVDGQERVYKVLSSPTDYAYYTAE CCCCCCCCCCCCCCHHHHCHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECC DRPTGNHFPVVYADHGTAGRSSRGFPFHIVEVERLYPLPGTGEAVEVATKLSTSYFDACM CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH MWRNLAQDMGRIALHHLTVTPMGWSDAVQESLKALEVFSGEYGALPDLIKADNLMMRKDG HHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCC TLVFSDPVFME CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA