| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906615
Identifier: 71906615
GI number: 71906615
Start: 1068512
End: 1068991
Strand: Reverse
Name: 71906615
Synonym: Daro_0976
Alternate gene names: NA
Gene position: 1068991-1068512 (Counterclockwise)
Preceding gene: 71906616
Following gene: 71906614
Centisome position: 23.75
GC content: 63.33
Gene sequence:
>480_bases ATGACCATCAGCCAGGTTCAATACACCTCACGCAAACTGGCCGAACAGTTGCGGGGCACCCCCTACATGGCAGTGATCTC GATCACCGACCCGACGACACCGGAGGCCAGGCTCGATCCGCTGTTCCGCCATGTCCTGCGCCTGTCCTTTTTCGATGCGG TGCCGGCCGACGAATTCATGCCGGCCTGCCCCGGCCTGTTCGACTACCACATGGCGGCGCAGATCAGCGCCTTCATCGAG GAACTCCATGCCGCGCCGTTCGAAATATCGCTGATGGTGCATTGTGAATATGGTGTCAGCCGTTCGGCCGCCGTTGCACT GTTTGCCGAGGCCCTGACCGGCGCCCCGCTGGAAGCCAGGGAATTCACCTACGAAGCCAACCAGTGGGTACTCGACCAGT TGCTACAGCGCCACCCCGGTCTGGACGTCGATATGCCCGCCCCGCTGATCAGCCGCGAGCGCCGCGCCGTGCGGCGATAG
Upstream 100 bases:
>100_bases GAATACGGCGCCCTGCCGGACCTGATCAAAGCCGACAACCTGATGATGCGCAAGGATGGCACCCTGGTCTTTTCCGACCC GGTTTTCATGGAATGACGCG
Downstream 100 bases:
>100_bases TGAATTGCCTCATCGTGGGAACACTACCGGCTACAGCCCAATATTGTTTGCTGCACCGCAGCAACCTATACTAGAACATC GCGTGACTCACTGGAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTISQVQYTSRKLAEQLRGTPYMAVISITDPTTPEARLDPLFRHVLRLSFFDAVPADEFMPACPGLFDYHMAAQISAFIE ELHAAPFEISLMVHCEYGVSRSAAVALFAEALTGAPLEAREFTYEANQWVLDQLLQRHPGLDVDMPAPLISRERRAVRR
Sequences:
>Translated_159_residues MTISQVQYTSRKLAEQLRGTPYMAVISITDPTTPEARLDPLFRHVLRLSFFDAVPADEFMPACPGLFDYHMAAQISAFIE ELHAAPFEISLMVHCEYGVSRSAAVALFAEALTGAPLEAREFTYEANQWVLDQLLQRHPGLDVDMPAPLISRERRAVRR >Mature_158_residues TISQVQYTSRKLAEQLRGTPYMAVISITDPTTPEARLDPLFRHVLRLSFFDAVPADEFMPACPGLFDYHMAAQISAFIEE LHAAPFEISLMVHCEYGVSRSAAVALFAEALTGAPLEAREFTYEANQWVLDQLLQRHPGLDVDMPAPLISRERRAVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17907; Mature: 17776
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00383 TYR_PHOSPHATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISQVQYTSRKLAEQLRGTPYMAVISITDPTTPEARLDPLFRHVLRLSFFDAVPADEFM CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHC PACPGLFDYHMAAQISAFIEELHAAPFEISLMVHCEYGVSRSAAVALFAEALTGAPLEAR CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHH EFTYEANQWVLDQLLQRHPGLDVDMPAPLISRERRAVRR HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TISQVQYTSRKLAEQLRGTPYMAVISITDPTTPEARLDPLFRHVLRLSFFDAVPADEFM CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHC PACPGLFDYHMAAQISAFIEELHAAPFEISLMVHCEYGVSRSAAVALFAEALTGAPLEAR CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHH EFTYEANQWVLDQLLQRHPGLDVDMPAPLISRERRAVRR HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA