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The map label for this gene is 71906572

Identifier: 71906572

GI number: 71906572

Start: 1012326

End: 1012931

Strand: Reverse

Name: 71906572

Synonym: Daro_0933

Alternate gene names: NA

Gene position: 1012931-1012326 (Counterclockwise)

Preceding gene: 71906573

Following gene: 71906569

Centisome position: 22.5

GC content: 62.21

Gene sequence:

>606_bases
ATGTCTGACATTGCTGTTGTTGCCCCGGGGGCTTGGCTATCCTCGGCGGGTGCCACATTCCTGTTGATTGCCCTGGCCGA
ATTCGGCGACAAGAGCCAGCTCGTTTGCATGACGCTGGCCGCCCGCCATCGCGGCCTGCCCGTTGTATTGGGCGCGGTCG
CCGCCTTCGCCATCCTCAATCTGCTCGCCGTGCTGTTCGGTGCGGCCGTTGCTGCCTGGCTGCCGGAATGGGTCGTGACC
TTGGCCGTCGCCGTACTGTTCACCATTTTCGGGATCAGCGCACTTCGCTTCAAGGAAGAAGAGGAGGATGAAGAAATCGA
GGAAAAACCGGGCCACGGCATCTTCGCAACCACTTTCCTGATGATTTTCCTCGCCGAGTTCGGCGACAAGACACAGATCG
CAGTCGCCGGCATGGGTAGCGCGGCCAATGCCAGCGCCACCTGGGTTGGCGCCACACTGGCGCTGGCGTGCACTTCGCTG
CTCGGCGTCTTCGCCGGCCGACGATTGCTCAATCACCTACCCCTGAAGTGGATACACCGGATCAGTGGCGTGTTTTTCCT
GCTGCTGGCGCTGCTCGCCGCCCTGCGCCTGCTTGGCCTGGTTTAG

Upstream 100 bases:

>100_bases
TTCAGGATCACGCGCTCTACCTTTATGCCCAATGCACCAAGGCCGAGTGCCAGCACCGCAATAATCCGGACAGCAAGTCC
TGATTCACTGAAACTTCTCC

Downstream 100 bases:

>100_bases
ACTTTTGCCTTTTTGGCCCTTGTGCCAAGCAGTTCGCGGGCATGCTTGAGCGTGATATCGGTGATCTCGACACCGCCCAG
CATTCGGGCAATTTCCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSDIAVVAPGAWLSSAGATFLLIALAEFGDKSQLVCMTLAARHRGLPVVLGAVAAFAILNLLAVLFGAAVAAWLPEWVVT
LAVAVLFTIFGISALRFKEEEEDEEIEEKPGHGIFATTFLMIFLAEFGDKTQIAVAGMGSAANASATWVGATLALACTSL
LGVFAGRRLLNHLPLKWIHRISGVFFLLLALLAALRLLGLV

Sequences:

>Translated_201_residues
MSDIAVVAPGAWLSSAGATFLLIALAEFGDKSQLVCMTLAARHRGLPVVLGAVAAFAILNLLAVLFGAAVAAWLPEWVVT
LAVAVLFTIFGISALRFKEEEEDEEIEEKPGHGIFATTFLMIFLAEFGDKTQIAVAGMGSAANASATWVGATLALACTSL
LGVFAGRRLLNHLPLKWIHRISGVFFLLLALLAALRLLGLV
>Mature_200_residues
SDIAVVAPGAWLSSAGATFLLIALAEFGDKSQLVCMTLAARHRGLPVVLGAVAAFAILNLLAVLFGAAVAAWLPEWVVTL
AVAVLFTIFGISALRFKEEEEDEEIEEKPGHGIFATTFLMIFLAEFGDKTQIAVAGMGSAANASATWVGATLALACTSLL
GVFAGRRLLNHLPLKWIHRISGVFFLLLALLAALRLLGLV

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 21202; Mature: 21071

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIAVVAPGAWLSSAGATFLLIALAEFGDKSQLVCMTLAARHRGLPVVLGAVAAFAILN
CCCCEEECCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLAVLFGAAVAAWLPEWVVTLAVAVLFTIFGISALRFKEEEEDEEIEEKPGHGIFATTFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
MIFLAEFGDKTQIAVAGMGSAANASATWVGATLALACTSLLGVFAGRRLLNHLPLKWIHR
HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ISGVFFLLLALLAALRLLGLV
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDIAVVAPGAWLSSAGATFLLIALAEFGDKSQLVCMTLAARHRGLPVVLGAVAAFAILN
CCCEEECCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLAVLFGAAVAAWLPEWVVTLAVAVLFTIFGISALRFKEEEEDEEIEEKPGHGIFATTFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
MIFLAEFGDKTQIAVAGMGSAANASATWVGATLALACTSLLGVFAGRRLLNHLPLKWIHR
HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ISGVFFLLLALLAALRLLGLV
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]