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The map label for this gene is nanR [C]

Identifier: 71906537

GI number: 71906537

Start: 971767

End: 972417

Strand: Reverse

Name: nanR [C]

Synonym: Daro_0898

Alternate gene names: 71906537

Gene position: 972417-971767 (Counterclockwise)

Preceding gene: 71906551

Following gene: 71906536

Centisome position: 21.6

GC content: 51.92

Gene sequence:

>651_bases
ATGGCCAGCAAAAAAAATCTGATTTACGAAGAAATCCTGGGAAGGCTTTTCGAGGGACGCTACCGTTTTGGAGCCCCTAT
TCCCGTCAAGGAAATCAGCGAAGATACCGGCGCAAGTCGTAACCCCATCATGGCGGCCTTGTATCGTCTTCAGGACAACG
GCTTTGTTCGAATTACCGCCCAGGTCGGTTGTCGCGTCGTCGAGCCGACCTTTGACGAAATCAGCGACTTCTATCGCATG
TTTGCGGCGACGGAAGGACTCATCGGGGAATTGGCCGCTGAAAGAGCCACGCCTGACGATCTGGCAAAGCTAAGAGCGAT
CAACCAGCAGATAGCGGAAATCGACAATACGAAGCCCGATGCGGCACGCTTATATCAACAACTCAATGTCCGGTTTCACA
AGCAATTGCACGCAATGGCGCGCTCGCCGATTGTTTGCTCGAGGCAGCTGGCGAATTTTGAACTCTCGGATTTTTACCTC
GTACAGACCGAAGGGTTCAAAGCCCATATTGGATTGGTTTACGCAGAGCATCAGGAAATTATCGACGCCATCGCTGAGCA
TCAGTGCGAGAAAGCCGGGACTCAGGCAAAAATGCATATCGATAGCGTCGCCAGGACACTGCTTGAGCATCTCAAATTAA
CGACGGGCTGA

Upstream 100 bases:

>100_bases
GGATCACAACAATGCGATCAACAATTCGTGACTGGATCAGGCAACGCCTGGTCCGGAAAACCGACGCCTTTGGTACCATC
TGCGTGAAGGGATGCAAAAA

Downstream 100 bases:

>100_bases
TTGCCTTATCGTATTGATCACCAAGACAAACATGCGACCAGAGAGCGGAGCCAGTTATCGCAACGTGCAGGGCCTGAGCC
GTGGCTTGTCCATCCTGCGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; Regulatory Protein NimR; GntR-Family Protein Transcriptional Regulator; Naphthalene Degradation Regulatory Protein; GntR Family Regulatory Protein; Transcriptional Regulater GntR Family Protein

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MASKKNLIYEEILGRLFEGRYRFGAPIPVKEISEDTGASRNPIMAALYRLQDNGFVRITAQVGCRVVEPTFDEISDFYRM
FAATEGLIGELAAERATPDDLAKLRAINQQIAEIDNTKPDAARLYQQLNVRFHKQLHAMARSPIVCSRQLANFELSDFYL
VQTEGFKAHIGLVYAEHQEIIDAIAEHQCEKAGTQAKMHIDSVARTLLEHLKLTTG

Sequences:

>Translated_216_residues
MASKKNLIYEEILGRLFEGRYRFGAPIPVKEISEDTGASRNPIMAALYRLQDNGFVRITAQVGCRVVEPTFDEISDFYRM
FAATEGLIGELAAERATPDDLAKLRAINQQIAEIDNTKPDAARLYQQLNVRFHKQLHAMARSPIVCSRQLANFELSDFYL
VQTEGFKAHIGLVYAEHQEIIDAIAEHQCEKAGTQAKMHIDSVARTLLEHLKLTTG
>Mature_215_residues
ASKKNLIYEEILGRLFEGRYRFGAPIPVKEISEDTGASRNPIMAALYRLQDNGFVRITAQVGCRVVEPTFDEISDFYRMF
AATEGLIGELAAERATPDDLAKLRAINQQIAEIDNTKPDAARLYQQLNVRFHKQLHAMARSPIVCSRQLANFELSDFYLV
QTEGFKAHIGLVYAEHQEIIDAIAEHQCEKAGTQAKMHIDSVARTLLEHLKLTTG

Specific function: Sialic acid (NANA) and N-acetylmannosamine utilization [C]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24308; Mature: 24177

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKKNLIYEEILGRLFEGRYRFGAPIPVKEISEDTGASRNPIMAALYRLQDNGFVRITA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEH
QVGCRVVEPTFDEISDFYRMFAATEGLIGELAAERATPDDLAKLRAINQQIAEIDNTKPD
HHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH
AARLYQQLNVRFHKQLHAMARSPIVCSRQLANFELSDFYLVQTEGFKAHIGLVYAEHQEI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCCEEEEHEEEHHHHHH
IDAIAEHQCEKAGTQAKMHIDSVARTLLEHLKLTTG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASKKNLIYEEILGRLFEGRYRFGAPIPVKEISEDTGASRNPIMAALYRLQDNGFVRITA
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEH
QVGCRVVEPTFDEISDFYRMFAATEGLIGELAAERATPDDLAKLRAINQQIAEIDNTKPD
HHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH
AARLYQQLNVRFHKQLHAMARSPIVCSRQLANFELSDFYLVQTEGFKAHIGLVYAEHQEI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCCEEEEHEEEHHHHHH
IDAIAEHQCEKAGTQAKMHIDSVARTLLEHLKLTTG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA