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The map label for this gene is ylqH [H]

Identifier: 71906417

GI number: 71906417

Start: 845591

End: 845872

Strand: Reverse

Name: ylqH [H]

Synonym: Daro_0778

Alternate gene names: 71906417

Gene position: 845872-845591 (Counterclockwise)

Preceding gene: 71906418

Following gene: 71906416

Centisome position: 18.79

GC content: 59.57

Gene sequence:

>282_bases
ATGGCGAAACTGCCGAGTGACCCGACTCGCGAGGCAATTGCCCTCGCCTACAGCCAGACCGATGCAGCGCCGCGCGTGGT
GGCCAAAGGCAAGGGGCTGATCGCCGAGCAGATTATTGCCCGAGCCAAGGAACATGGCGTTTACGTGCACGAGTCACCAG
AACTCGTTGCCCTGCTCACTCAGGTAGACCTCGACGAGCACATTCCTCCGCAGCTTTATATCGCAATTGCCGAGTTGCTG
GCCTGGCTCTACCGCATCGAACATGGCGGCACCGCAACATAA

Upstream 100 bases:

>100_bases
GGCTCAGAAAGCAGCGAGGCCCGCCTGCGTGACGGGGCCTTGCAGTTGCGCGAGCAATTTGAAGCGGCTGGGCTGAATTT
AACTGAGCTACAGGTCCTGC

Downstream 100 bases:

>100_bases
CCACCGCACTAAGCTTCTTCTGGCCACAGTAGCCCCCCCAATGGATTACCATGATCGGGTTAGCATATTGATAGCCTCGA
ATGTCCTCCACCCAAGAAGA

Product: flagellar biosynthetic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MAKLPSDPTREAIALAYSQTDAAPRVVAKGKGLIAEQIIARAKEHGVYVHESPELVALLTQVDLDEHIPPQLYIAIAELL
AWLYRIEHGGTAT

Sequences:

>Translated_93_residues
MAKLPSDPTREAIALAYSQTDAAPRVVAKGKGLIAEQIIARAKEHGVYVHESPELVALLTQVDLDEHIPPQLYIAIAELL
AWLYRIEHGGTAT
>Mature_92_residues
AKLPSDPTREAIALAYSQTDAAPRVVAKGKGLIAEQIIARAKEHGVYVHESPELVALLTQVDLDEHIPPQLYIAIAELLA
WLYRIEHGGTAT

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788188, Length=85, Percent_Identity=40, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 10126; Mature: 9995

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLPSDPTREAIALAYSQTDAAPRVVAKGKGLIAEQIIARAKEHGVYVHESPELVALLT
CCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHH
QVDLDEHIPPQLYIAIAELLAWLYRIEHGGTAT
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKLPSDPTREAIALAYSQTDAAPRVVAKGKGLIAEQIIARAKEHGVYVHESPELVALLT
CCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHH
QVDLDEHIPPQLYIAIAELLAWLYRIEHGGTAT
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]