| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906418
Identifier: 71906418
GI number: 71906418
Start: 845853
End: 846941
Strand: Reverse
Name: 71906418
Synonym: Daro_0779
Alternate gene names: NA
Gene position: 846941-845853 (Counterclockwise)
Preceding gene: 71906419
Following gene: 71906417
Centisome position: 18.82
GC content: 57.02
Gene sequence:
>1089_bases TTGCTCCCCGCCGACGTCGCCAGCAGCTTGCGGCTGAACCTACCCAATCAGCACGCCTTAAGCAATGAGCAAACACAACC GGTAGCGGCAACGCAGAAGATTAGCGATGTACTCAGTGACCTTGTACCCGGCCAGCGGGTTCTGGCCGAGATACAAGCCC TGTTGCCGAATGGCACTTATCGCGCCGTAGTTGCCCAGCGCAACGTTACTCTGGCCCTGCCTTTTTCCGCCAAGCCTGGC GACAGCCTTGAACTTGAGGTAGTCGAGAAGGAAGGCAACGTTACACTGGCCCTTGTCGCGAATCGCGGTGGTAGTGCAAC AGCGGCAAACGAGTCCGTATCGACCAGTTTAAGCAATACAGGCAAGCTCATTGGCGACCTGATGAGCCAAGTAAACGAGC GGGGAGGAAGAGCCCCGGCAGCGGCACTCAACAGCAGCCAGCCCCTGCTCGAAACCATTCCCAAAAACGCCGCAGACCTG GTTCCTCTGCTAAAACAGGCGCTCAGTGAGAGCGGCATGTTTTATGAAGCACATCAGGCGCGTTGGGTGGCAGGTGAAAT CCCTACTGAAGCGCTCAAGCTAGAACCGCAGGGAAAATACCCTGCCTCTCTGATCTCTGATCAAAACGCCTCGAAAATCG CGAATCCCGGCAATCCAGAACAAGCAATTACAGCCTCCTCCATGAAAGAGTCGGCAGTCGGCAGCCCCGTTCCGCGCGAC TTGATGCCGATTGTGCAGCAACAACTCGACGGGCTGGCAAACCAGAACTTTGCTTGGCAAGGCCAGATCTGGCCCGGGCA ACAAATGCGCTGGGAAATTGGCGAGAACATGGATAACTCGCGCTCGTCGAATACGGAAGAGATTCAGCGCTGGAAAACAC GCTTGAAACTGTCCCTCCCGTTGCTGGGCGATATCGACGTAGCCCTTAACCTGAAGACCGGCGGCGAGGTCAGTATTGCA GTCACCGCCGGCTCAGAAAGCAGCGAGGCCCGCCTGCGTGACGGGGCCTTGCAGTTGCGCGAGCAATTTGAAGCGGCTGG GCTGAATTTAACTGAGCTACAGGTCCTGCATGGCGAAACTGCCGAGTGA
Upstream 100 bases:
>100_bases AATCGATGCACAATTGCAGGAAATCGTTGCGACATGGCTTGAGCACGCCCGGATTCTGTTGCGTATCAAACCAGTTTCAC CTCTTTAAGCAGAGACTGAG
Downstream 100 bases:
>100_bases CCCGACTCGCGAGGCAATTGCCCTCGCCTACAGCCAGACCGATGCAGCGCCGCGCGTGGTGGCCAAAGGCAAGGGGCTGA TCGCCGAGCAGATTATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLPADVASSLRLNLPNQHALSNEQTQPVAATQKISDVLSDLVPGQRVLAEIQALLPNGTYRAVVAQRNVTLALPFSAKPG DSLELEVVEKEGNVTLALVANRGGSATAANESVSTSLSNTGKLIGDLMSQVNERGGRAPAAALNSSQPLLETIPKNAADL VPLLKQALSESGMFYEAHQARWVAGEIPTEALKLEPQGKYPASLISDQNASKIANPGNPEQAITASSMKESAVGSPVPRD LMPIVQQQLDGLANQNFAWQGQIWPGQQMRWEIGENMDNSRSSNTEEIQRWKTRLKLSLPLLGDIDVALNLKTGGEVSIA VTAGSESSEARLRDGALQLREQFEAAGLNLTELQVLHGETAE
Sequences:
>Translated_362_residues MLPADVASSLRLNLPNQHALSNEQTQPVAATQKISDVLSDLVPGQRVLAEIQALLPNGTYRAVVAQRNVTLALPFSAKPG DSLELEVVEKEGNVTLALVANRGGSATAANESVSTSLSNTGKLIGDLMSQVNERGGRAPAAALNSSQPLLETIPKNAADL VPLLKQALSESGMFYEAHQARWVAGEIPTEALKLEPQGKYPASLISDQNASKIANPGNPEQAITASSMKESAVGSPVPRD LMPIVQQQLDGLANQNFAWQGQIWPGQQMRWEIGENMDNSRSSNTEEIQRWKTRLKLSLPLLGDIDVALNLKTGGEVSIA VTAGSESSEARLRDGALQLREQFEAAGLNLTELQVLHGETAE >Mature_362_residues MLPADVASSLRLNLPNQHALSNEQTQPVAATQKISDVLSDLVPGQRVLAEIQALLPNGTYRAVVAQRNVTLALPFSAKPG DSLELEVVEKEGNVTLALVANRGGSATAANESVSTSLSNTGKLIGDLMSQVNERGGRAPAAALNSSQPLLETIPKNAADL VPLLKQALSESGMFYEAHQARWVAGEIPTEALKLEPQGKYPASLISDQNASKIANPGNPEQAITASSMKESAVGSPVPRD LMPIVQQQLDGLANQNFAWQGQIWPGQQMRWEIGENMDNSRSSNTEEIQRWKTRLKLSLPLLGDIDVALNLKTGGEVSIA VTAGSESSEARLRDGALQLREQFEAAGLNLTELQVLHGETAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38630; Mature: 38630
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPADVASSLRLNLPNQHALSNEQTQPVAATQKISDVLSDLVPGQRVLAEIQALLPNGTY CCCHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCE RAVVAQRNVTLALPFSAKPGDSLELEVVEKEGNVTLALVANRGGSATAANESVSTSLSNT EEEEEECCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHH GKLIGDLMSQVNERGGRAPAAALNSSQPLLETIPKNAADLVPLLKQALSESGMFYEAHQA HHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCC RWVAGEIPTEALKLEPQGKYPASLISDQNASKIANPGNPEQAITASSMKESAVGSPVPRD EEEECCCCCHHEEECCCCCCCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHH LMPIVQQQLDGLANQNFAWQGQIWPGQQMRWEIGENMDNSRSSNTEEIQRWKTRLKLSLP HHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECC LLGDIDVALNLKTGGEVSIAVTAGSESSEARLRDGALQLREQFEAAGLNLTELQVLHGET CCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCC AE CC >Mature Secondary Structure MLPADVASSLRLNLPNQHALSNEQTQPVAATQKISDVLSDLVPGQRVLAEIQALLPNGTY CCCHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCE RAVVAQRNVTLALPFSAKPGDSLELEVVEKEGNVTLALVANRGGSATAANESVSTSLSNT EEEEEECCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHH GKLIGDLMSQVNERGGRAPAAALNSSQPLLETIPKNAADLVPLLKQALSESGMFYEAHQA HHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCC RWVAGEIPTEALKLEPQGKYPASLISDQNASKIANPGNPEQAITASSMKESAVGSPVPRD EEEECCCCCHHEEECCCCCCCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHH LMPIVQQQLDGLANQNFAWQGQIWPGQQMRWEIGENMDNSRSSNTEEIQRWKTRLKLSLP HHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECC LLGDIDVALNLKTGGEVSIAVTAGSESSEARLRDGALQLREQFEAAGLNLTELQVLHGET CCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCC AE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA