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The map label for this gene is yfdZ [C]

Identifier: 71906303

GI number: 71906303

Start: 730061

End: 731221

Strand: Reverse

Name: yfdZ [C]

Synonym: Daro_0664

Alternate gene names: 71906303

Gene position: 731221-730061 (Counterclockwise)

Preceding gene: 71906304

Following gene: 71906296

Centisome position: 16.25

GC content: 63.14

Gene sequence:

>1161_bases
ATGTACCGTCCCGCCCGACGCCTCGCCGATATCGAGCCTTTCCATGTCGTCGAATTGCTGACCCGTGCCCGGCAACTGGA
AGCCGAGGGGCGCGACATCATTCACATGGAAGTGGGTGAGCCTGACTTTCCGACACCGGAGCCCATCGCCAATTCGGCGA
TCAATGCGATCAAGAGCGGGAAAACGCTCTACACCCAGGCCCTCGGCCTGCCTGAGTTGCGCGAGGCGATCAGCCAATTC
TATGGGCAGCGCTACGGCGCCTCCGTGCCAGCCAGCCGCATCGCCGTCACCAACGGCGCTTCCGGCGCGCTGAACCTGGC
CTTCGCCTGCCTCGCCGACCCCGGCAGTGAATGGCTACTGACCGACCCCGGCTACCCTTGCAACCGGCACATCTTGCGAG
CATATGAAGGATGCCCCCAGAACATCCCGGTCGGCCCCGACACCAACTTCCAGCCAACACCGGAGTTGCTACGCCGACAC
TGGAAATCGACCACCGCCGGCCTGCTCGTTGCCTCGCCGGCCAACCCGACCGGCACCCTGCTCACCTTGCCGGAGATTGC
CGGACTGTCTGAAGTCTGCCGCGAAAAGAACGGGCATTTTCTGGTCGACGAGATCTACCACGGACTCACGTATGAAATCG
ATGCCCCTACCGCCTGTGCCGCCGGCGAAGACATCTGGGTCATCAACAGCTTTTCCAAGTATTTCCAGATGACCGGCTGG
CGTCTGGGCTGGATGGTCATTCCCGAAGCCTACGTCCGTGATGTCGAAAAGTTGGCGCAGAACCTGACGCTCTGCCCCTC
AACGCCAGCCCAGCATGCTGCGCTGGCCGCATTCGAACCAGAAACCATCGCCATCCTCGAAAGCCGGCGCAGTGAATTCC
GTCGCCGCCGCGACTTCCTGGCTCCGGCGCTGGAGGCGATCGGTTTCCGCATCACCGCCCGCCCCGAAGGGGCGTTCTAT
CTGTATTGCGATTGCTCGGCGCTGGCCGATGACAGCTTCGCGCTGGCCAAGGATCTGCTGGAAAAGACCGGCGTTGCTGC
CACGCCCGGCCTCGACTTCGGCAGCAACCAGCCGGAGAAGCACATCCGCTTCGCCTACACCACTGGCGTTGAGCGGCTGG
CCGAAGCCGTGGAGCGCCTAAGCCGCTATTTCGGCCGGTAA

Upstream 100 bases:

>100_bases
GAACTATTCGAAATGGCACTGTTCAAGAACGCTGACTAATTCCAGTTCTTGCTATGATCGACGGCCACCTCAGGGTGGCC
GTTTTACTTTGGAGAACCGC

Downstream 100 bases:

>100_bases
GCCCAGCCCGGGATAGCGGGAGCGCAGGGTTACCCAGTCGAAATACGGCCCTGGATCGGTCTTTCGCCCAGGCGCAATAT
GGCAATGGCCGGCGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MYRPARRLADIEPFHVVELLTRARQLEAEGRDIIHMEVGEPDFPTPEPIANSAINAIKSGKTLYTQALGLPELREAISQF
YGQRYGASVPASRIAVTNGASGALNLAFACLADPGSEWLLTDPGYPCNRHILRAYEGCPQNIPVGPDTNFQPTPELLRRH
WKSTTAGLLVASPANPTGTLLTLPEIAGLSEVCREKNGHFLVDEIYHGLTYEIDAPTACAAGEDIWVINSFSKYFQMTGW
RLGWMVIPEAYVRDVEKLAQNLTLCPSTPAQHAALAAFEPETIAILESRRSEFRRRRDFLAPALEAIGFRITARPEGAFY
LYCDCSALADDSFALAKDLLEKTGVAATPGLDFGSNQPEKHIRFAYTTGVERLAEAVERLSRYFGR

Sequences:

>Translated_386_residues
MYRPARRLADIEPFHVVELLTRARQLEAEGRDIIHMEVGEPDFPTPEPIANSAINAIKSGKTLYTQALGLPELREAISQF
YGQRYGASVPASRIAVTNGASGALNLAFACLADPGSEWLLTDPGYPCNRHILRAYEGCPQNIPVGPDTNFQPTPELLRRH
WKSTTAGLLVASPANPTGTLLTLPEIAGLSEVCREKNGHFLVDEIYHGLTYEIDAPTACAAGEDIWVINSFSKYFQMTGW
RLGWMVIPEAYVRDVEKLAQNLTLCPSTPAQHAALAAFEPETIAILESRRSEFRRRRDFLAPALEAIGFRITARPEGAFY
LYCDCSALADDSFALAKDLLEKTGVAATPGLDFGSNQPEKHIRFAYTTGVERLAEAVERLSRYFGR
>Mature_386_residues
MYRPARRLADIEPFHVVELLTRARQLEAEGRDIIHMEVGEPDFPTPEPIANSAINAIKSGKTLYTQALGLPELREAISQF
YGQRYGASVPASRIAVTNGASGALNLAFACLADPGSEWLLTDPGYPCNRHILRAYEGCPQNIPVGPDTNFQPTPELLRRH
WKSTTAGLLVASPANPTGTLLTLPEIAGLSEVCREKNGHFLVDEIYHGLTYEIDAPTACAAGEDIWVINSFSKYFQMTGW
RLGWMVIPEAYVRDVEKLAQNLTLCPSTPAQHAALAAFEPETIAILESRRSEFRRRRDFLAPALEAIGFRITARPEGAFY
LYCDCSALADDSFALAKDLLEKTGVAATPGLDFGSNQPEKHIRFAYTTGVERLAEAVERLSRYFGR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=418, Percent_Identity=26.0765550239234, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI169881279, Length=418, Percent_Identity=26.0765550239234, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI56713254, Length=389, Percent_Identity=25.706940874036, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI56713256, Length=389, Percent_Identity=25.706940874036, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI169881281, Length=273, Percent_Identity=24.9084249084249, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI4507369, Length=307, Percent_Identity=25.0814332247557, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1788722, Length=398, Percent_Identity=27.3869346733668, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788627, Length=386, Percent_Identity=26.1658031088083, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786816, Length=369, Percent_Identity=28.9972899728997, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71994476, Length=423, Percent_Identity=26.241134751773, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71994472, Length=423, Percent_Identity=26.241134751773, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17567369, Length=364, Percent_Identity=26.0989010989011, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17567663, Length=379, Percent_Identity=23.7467018469657, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6322401, Length=389, Percent_Identity=23.3933161953728, Blast_Score=93, Evalue=7e-20,
Organism=Drosophila melanogaster, GI28573069, Length=388, Percent_Identity=25.7731958762887, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646114, Length=388, Percent_Identity=25.7731958762887, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI28573067, Length=388, Percent_Identity=25.7731958762887, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI28573065, Length=388, Percent_Identity=25.7731958762887, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI18859735, Length=375, Percent_Identity=20.5333333333333, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42602; Mature: 42602

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRPARRLADIEPFHVVELLTRARQLEAEGRDIIHMEVGEPDFPTPEPIANSAINAIKSG
CCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
KTLYTQALGLPELREAISQFYGQRYGASVPASRIAVTNGASGALNLAFACLADPGSEWLL
CHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHEEEEEECCCCCCEEE
TDPGYPCNRHILRAYEGCPQNIPVGPDTNFQPTPELLRRHWKSTTAGLLVASPANPTGTL
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCE
LTLPEIAGLSEVCREKNGHFLVDEIYHGLTYEIDAPTACAAGEDIWVINSFSKYFQMTGW
EECHHHCCHHHHHHHCCCCEEHHHHHCCCEEEECCCCHHCCCCCEEEECCHHHHHHHCCC
RLGWMVIPEAYVRDVEKLAQNLTLCPSTPAQHAALAAFEPETIAILESRRSEFRRRRDFL
EEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHH
APALEAIGFRITARPEGAFYLYCDCSALADDSFALAKDLLEKTGVAATPGLDFGSNQPEK
HHHHHHHCEEEEECCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
HIRFAYTTGVERLAEAVERLSRYFGR
HEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRPARRLADIEPFHVVELLTRARQLEAEGRDIIHMEVGEPDFPTPEPIANSAINAIKSG
CCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
KTLYTQALGLPELREAISQFYGQRYGASVPASRIAVTNGASGALNLAFACLADPGSEWLL
CHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHEEEEEECCCCCCEEE
TDPGYPCNRHILRAYEGCPQNIPVGPDTNFQPTPELLRRHWKSTTAGLLVASPANPTGTL
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCE
LTLPEIAGLSEVCREKNGHFLVDEIYHGLTYEIDAPTACAAGEDIWVINSFSKYFQMTGW
EECHHHCCHHHHHHHCCCCEEHHHHHCCCEEEECCCCHHCCCCCEEEECCHHHHHHHCCC
RLGWMVIPEAYVRDVEKLAQNLTLCPSTPAQHAALAAFEPETIAILESRRSEFRRRRDFL
EEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHH
APALEAIGFRITARPEGAFYLYCDCSALADDSFALAKDLLEKTGVAATPGLDFGSNQPEK
HHHHHHHCEEEEECCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
HIRFAYTTGVERLAEAVERLSRYFGR
HEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]