| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is pckG [H]
Identifier: 71906304
GI number: 71906304
Start: 731283
End: 733127
Strand: Reverse
Name: pckG [H]
Synonym: Daro_0665
Alternate gene names: 71906304
Gene position: 733127-731283 (Counterclockwise)
Preceding gene: 71906307
Following gene: 71906303
Centisome position: 16.29
GC content: 61.3
Gene sequence:
>1845_bases ATGACCGCACCGCTGAATGCACCTGACTACGTCAAACATGAAGGCCTGAAAAAATGGGTCGCCGAGATCGCCGCGCTGAC CCAGCCGGACCGTATCCACTGGGCCGACGGGTCGCAGGAAGAGTATGACCGCCTGTGCGCAGAAATGGTAGAGGCCGGCA CGCTGATCAAGCTGAACGAAGCCAAGCGTCCTAATTCCTACCTCGCCTTCTCCGACCCGTCCGATGTGGCGCGTGTCGAA GACCGCACCTACATCTGCTCCGCCAACAAGGAAGACGCCGGCCCGACCAATAACTGGGAAGCACCGGCCGTCATGCGCGA AAAGCTGAACGGCATCTTCAAGGGCTGCATGAAGGGCCGTACGATGTACGTGATCCCGTTCTCGATGGGCCCGCTCGGTT CGCCGATCGCCCACATCGGTTTCGAGATTACCGACTCCGCCTACGTCGTGACCAACATGCGCACGATGACCCGCATGGGC AAGGCCGTTTTCGACGTGCTGGGCGCCGATGGCGAATTCGTGCCCTGCATCCACACGGTCGGCGCGCCGCTTGAACCGGG TCAGCAGGATGCCAAGTGGCCGTGCAACCCGACCGTCAAGTACATCGTGCACTACCCGGAAACCCGCGAAATCTGGTCCT ACGGCTCCGGTTACGGCGGCAACGCGCTGCTCGGCAAGAAGTGCTTTGCCCTGCGCATCGCCTCCAACATGGCGCGCGAT CAGGGCTGGCTGGCCGAACACATGCTGATTCTCGGCGTCGAATCGCCGGAAGGTGAAAAGTCCTACGTCGCTGCCGCCTT CCCGTCGGCCTGCGGCAAGACCAACTTCGCCATGCTGATCCCGCCGAAGACCCTCGACGGCTGGAAGATCACCACCATCG GTGACGACATCGCCTGGATCAAGCCGCGTGTCGACAAGGACGGTGTCACCCGCTTCTACGCCATCAACCCGGAAGCCGGT TTCTTCGGCGTCGCCCCGGGCACCTCGGAAAAGACCAACTTCAACGCCTTGGCCACGCTCAAGGAAAACATCATCTTCAC CAACGTCGCGCTGACCGACGACGGCGACGTGTGGTGGGAAGGCCTGACCAAGGAAGCTCCGGCGCACCTGATCGACTGGC AAGGCAACGACTGGACCCCGGAAGATGGCAAGGCCGGCAAGAAGGCCGCCCACGCCAACTCCCGCTTCACCGCCCCGGCC AGCCAGTGCCCGTCCGTTGATTCCGCTTGGGAAGACCCGGCCGGTGTGCCGATTTCCGCCTTTATCTTCGGCGGCCGTCG CGCCACCACCGTGCCGCTGGTCTATGAAGCCTTCAACTGGAACTACGGCGTCTACATGGCGGCCACCCTGGGCTCCGAAA CCACCGCTGCCGCCTTTGGCCAGCAAGGTGTTGTCCGCCGCGACCCGTTCGCCATGCTGCCGTTCTGCGGCTACCACATG GGCGATTACTTCAACCACTGGTTGAAGATGGGCAAGACCGTTGATGCCGCCCCGAAGATCTTCTGCGTGAACTGGTTCCG CATGAACGAAAAGGGCGAATTCATGTGGCCGGGCTTCGGTGACAACATGCGCGTCCTGAAGTGGATCGTTCAGCGCTGCA AGGGCAAGGTTTCTGCCAAGGAAACCGCGCTGGGCTGGATGCCGCAGTTTGCTGACATCGACTGGACCGGCCTCGACATC AGCAAGGCTGAATTCGACGGTCTGACCAAAATCGATGCCGACGCCTGGAAATCCGAACTGGCCGGCCACAAGGAGTGGTT CGACAAGATGGGCGAAAAGTTGCCACGCGAATTCACGCTGAAACGCGAACTATTCGAAATGGCACTGTTCAAGAACGCTG ACTAA
Upstream 100 bases:
>100_bases TTCCCAGCCGACGGCCCCTAGCCGCTTTCAGTCTTGGTGGCAGCTCCCGGCGACTGGCGCAAAGTTTATCTATTTCAGTA ACTTGGAGAGAGACATCGCC
Downstream 100 bases:
>100_bases TTCCAGTTCTTGCTATGATCGACGGCCACCTCAGGGTGGCCGTTTTACTTTGGAGAACCGCATGTACCGTCCCGCCCGAC GCCTCGCCGATATCGAGCCT
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MTAPLNAPDYVKHEGLKKWVAEIAALTQPDRIHWADGSQEEYDRLCAEMVEAGTLIKLNEAKRPNSYLAFSDPSDVARVE DRTYICSANKEDAGPTNNWEAPAVMREKLNGIFKGCMKGRTMYVIPFSMGPLGSPIAHIGFEITDSAYVVTNMRTMTRMG KAVFDVLGADGEFVPCIHTVGAPLEPGQQDAKWPCNPTVKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIASNMARD QGWLAEHMLILGVESPEGEKSYVAAAFPSACGKTNFAMLIPPKTLDGWKITTIGDDIAWIKPRVDKDGVTRFYAINPEAG FFGVAPGTSEKTNFNALATLKENIIFTNVALTDDGDVWWEGLTKEAPAHLIDWQGNDWTPEDGKAGKKAAHANSRFTAPA SQCPSVDSAWEDPAGVPISAFIFGGRRATTVPLVYEAFNWNYGVYMAATLGSETTAAAFGQQGVVRRDPFAMLPFCGYHM GDYFNHWLKMGKTVDAAPKIFCVNWFRMNEKGEFMWPGFGDNMRVLKWIVQRCKGKVSAKETALGWMPQFADIDWTGLDI SKAEFDGLTKIDADAWKSELAGHKEWFDKMGEKLPREFTLKRELFEMALFKNAD
Sequences:
>Translated_614_residues MTAPLNAPDYVKHEGLKKWVAEIAALTQPDRIHWADGSQEEYDRLCAEMVEAGTLIKLNEAKRPNSYLAFSDPSDVARVE DRTYICSANKEDAGPTNNWEAPAVMREKLNGIFKGCMKGRTMYVIPFSMGPLGSPIAHIGFEITDSAYVVTNMRTMTRMG KAVFDVLGADGEFVPCIHTVGAPLEPGQQDAKWPCNPTVKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIASNMARD QGWLAEHMLILGVESPEGEKSYVAAAFPSACGKTNFAMLIPPKTLDGWKITTIGDDIAWIKPRVDKDGVTRFYAINPEAG FFGVAPGTSEKTNFNALATLKENIIFTNVALTDDGDVWWEGLTKEAPAHLIDWQGNDWTPEDGKAGKKAAHANSRFTAPA SQCPSVDSAWEDPAGVPISAFIFGGRRATTVPLVYEAFNWNYGVYMAATLGSETTAAAFGQQGVVRRDPFAMLPFCGYHM GDYFNHWLKMGKTVDAAPKIFCVNWFRMNEKGEFMWPGFGDNMRVLKWIVQRCKGKVSAKETALGWMPQFADIDWTGLDI SKAEFDGLTKIDADAWKSELAGHKEWFDKMGEKLPREFTLKRELFEMALFKNAD >Mature_613_residues TAPLNAPDYVKHEGLKKWVAEIAALTQPDRIHWADGSQEEYDRLCAEMVEAGTLIKLNEAKRPNSYLAFSDPSDVARVED RTYICSANKEDAGPTNNWEAPAVMREKLNGIFKGCMKGRTMYVIPFSMGPLGSPIAHIGFEITDSAYVVTNMRTMTRMGK AVFDVLGADGEFVPCIHTVGAPLEPGQQDAKWPCNPTVKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIASNMARDQ GWLAEHMLILGVESPEGEKSYVAAAFPSACGKTNFAMLIPPKTLDGWKITTIGDDIAWIKPRVDKDGVTRFYAINPEAGF FGVAPGTSEKTNFNALATLKENIIFTNVALTDDGDVWWEGLTKEAPAHLIDWQGNDWTPEDGKAGKKAAHANSRFTAPAS QCPSVDSAWEDPAGVPISAFIFGGRRATTVPLVYEAFNWNYGVYMAATLGSETTAAAFGQQGVVRRDPFAMLPFCGYHMG DYFNHWLKMGKTVDAAPKIFCVNWFRMNEKGEFMWPGFGDNMRVLKWIVQRCKGKVSAKETALGWMPQFADIDWTGLDIS KAEFDGLTKIDADAWKSELAGHKEWFDKMGEKLPREFTLKRELFEMALFKNAD
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=611, Percent_Identity=50.5728314238953, Blast_Score=595, Evalue=1e-170, Organism=Homo sapiens, GI187281517, Length=609, Percent_Identity=50.9031198686371, Blast_Score=593, Evalue=1e-169, Organism=Homo sapiens, GI66346723, Length=378, Percent_Identity=53.7037037037037, Blast_Score=392, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17555492, Length=607, Percent_Identity=49.9176276771005, Blast_Score=568, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71989645, Length=596, Percent_Identity=50.1677852348993, Blast_Score=557, Evalue=1e-159, Organism=Caenorhabditis elegans, GI71989658, Length=596, Percent_Identity=50.1677852348993, Blast_Score=556, Evalue=1e-158, Organism=Caenorhabditis elegans, GI32564411, Length=562, Percent_Identity=51.779359430605, Blast_Score=551, Evalue=1e-157, Organism=Caenorhabditis elegans, GI71989653, Length=584, Percent_Identity=50.513698630137, Blast_Score=547, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564407, Length=506, Percent_Identity=53.1620553359684, Blast_Score=517, Evalue=1e-147, Organism=Caenorhabditis elegans, GI71989649, Length=489, Percent_Identity=52.9652351738241, Blast_Score=486, Evalue=1e-137, Organism=Caenorhabditis elegans, GI32564409, Length=361, Percent_Identity=49.584487534626, Blast_Score=332, Evalue=4e-91, Organism=Caenorhabditis elegans, GI17540956, Length=516, Percent_Identity=25.1937984496124, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24655085, Length=606, Percent_Identity=50.4950495049505, Blast_Score=590, Evalue=1e-168, Organism=Drosophila melanogaster, GI24655082, Length=593, Percent_Identity=50.2529510961214, Blast_Score=575, Evalue=1e-164, Organism=Drosophila melanogaster, GI161077226, Length=560, Percent_Identity=51.25, Blast_Score=550, Evalue=1e-156, Organism=Drosophila melanogaster, GI24655088, Length=499, Percent_Identity=53.1062124248497, Blast_Score=518, Evalue=1e-147,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68137; Mature: 68006
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLNAPDYVKHEGLKKWVAEIAALTQPDRIHWADGSQEEYDRLCAEMVEAGTLIKLNE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECC AKRPNSYLAFSDPSDVARVEDRTYICSANKEDAGPTNNWEAPAVMREKLNGIFKGCMKGR CCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC TMYVIPFSMGPLGSPIAHIGFEITDSAYVVTNMRTMTRMGKAVFDVLGADGEFVPCIHTV EEEEEEECCCCCCCCHHHCCEEECCCEEEEECHHHHHHHHHHHHHHHCCCCCEECHHHHC GAPLEPGQQDAKWPCNPTVKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIASNMARD CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH QGWLAEHMLILGVESPEGEKSYVAAAFPSACGKTNFAMLIPPKTLDGWKITTIGDDIAWI CCHHHEEEEEEEECCCCCCCCEEEEECCHHCCCCCEEEEECCCCCCCEEEEEECCCEEEE KPRVDKDGVTRFYAINPEAGFFGVAPGTSEKTNFNALATLKENIIFTNVALTDDGDVWWE CCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCHHHC GLTKEAPAHLIDWQGNDWTPEDGKAGKKAAHANSRFTAPASQCPSVDSAWEDPAGVPISA CCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEEE FIFGGRRATTVPLVYEAFNWNYGVYMAATLGSETTAAAFGQQGVVRRDPFAMLPFCGYHM EEECCCCCEEEEEEEEECCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEECCHHHHHH GDYFNHWLKMGKTVDAAPKIFCVNWFRMNEKGEFMWPGFGDNMRVLKWIVQRCKGKVSAK HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCH ETALGWMPQFADIDWTGLDISKAEFDGLTKIDADAWKSELAGHKEWFDKMGEKLPREFTL HHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHH KRELFEMALFKNAD HHHHHHHHHHCCCC >Mature Secondary Structure TAPLNAPDYVKHEGLKKWVAEIAALTQPDRIHWADGSQEEYDRLCAEMVEAGTLIKLNE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECC AKRPNSYLAFSDPSDVARVEDRTYICSANKEDAGPTNNWEAPAVMREKLNGIFKGCMKGR CCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC TMYVIPFSMGPLGSPIAHIGFEITDSAYVVTNMRTMTRMGKAVFDVLGADGEFVPCIHTV EEEEEEECCCCCCCCHHHCCEEECCCEEEEECHHHHHHHHHHHHHHHCCCCCEECHHHHC GAPLEPGQQDAKWPCNPTVKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIASNMARD CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH QGWLAEHMLILGVESPEGEKSYVAAAFPSACGKTNFAMLIPPKTLDGWKITTIGDDIAWI CCHHHEEEEEEEECCCCCCCCEEEEECCHHCCCCCEEEEECCCCCCCEEEEEECCCEEEE KPRVDKDGVTRFYAINPEAGFFGVAPGTSEKTNFNALATLKENIIFTNVALTDDGDVWWE CCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCHHHC GLTKEAPAHLIDWQGNDWTPEDGKAGKKAAHANSRFTAPASQCPSVDSAWEDPAGVPISA CCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEEE FIFGGRRATTVPLVYEAFNWNYGVYMAATLGSETTAAAFGQQGVVRRDPFAMLPFCGYHM EEECCCCCEEEEEEEEECCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEECCHHHHHH GDYFNHWLKMGKTVDAAPKIFCVNWFRMNEKGEFMWPGFGDNMRVLKWIVQRCKGKVSAK HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCH ETALGWMPQFADIDWTGLDISKAEFDGLTKIDADAWKSELAGHKEWFDKMGEKLPREFTL HHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHH KRELFEMALFKNAD HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA