Click here to switch to the map view.

The map label for this gene is 71906296

Identifier: 71906296

GI number: 71906296

Start: 722578

End: 723681

Strand: Reverse

Name: 71906296

Synonym: Daro_0657

Alternate gene names: NA

Gene position: 723681-722578 (Counterclockwise)

Preceding gene: 71906303

Following gene: 71906295

Centisome position: 16.08

GC content: 52.9

Gene sequence:

>1104_bases
ATGGACATTCGTTCAATCGTCGCAGCAGCCATCCAGAATAGAGAAGCACTGGAGGAGTTTGCCGAGGCTCTGAACGACCG
CGCTCCAGAAATCGAGCTTGACGTCGCACGGCTCAAGGAAACGCCTCTGGATCGGGATATCACTGCCAGTCTTTTCCGAG
CAGTACACAACATCAAGGGTGACTCTTCACTCTGCAAGTTCGACCTTGGTGTAGCCATTGCCCACCCCATCGAAACAATG
ATGTCTCGTTTCCGGGAAGGTGAAATTCCCTTCTCCAACATGTTAGCAGAACTGGTCCTGCTCGCAGTGGACCGACTGGA
ACTGACAACAGATGCCCTGCTGACCAACAAACCATTGGATAATCTCCGCTTGCCTGTTCTTGTGCAGGGACTTGAAGAGC
TTTCCAAGGAGACTCCTCAGCAAATCGATTTCAGTTGCGCCAACCTGATCGAAGCAGTGACCGGTTTCCCCCCGGTCATC
CCTGAAATATCGAGCCAGGCCCCCAAGGTATCAGCGCCAAAATCCGATCAGAAAAACGCCAGTAGCGATCTTCAGTTTTT
CCGCTCCCTGGCGTTACAATTTGAAAGCCGCTCGCCACTGTTCAAGGGGCGCACGATGCGCATTCTCCGGCTTGCACTGG
AAACAAATAAGGCTGGCAACAATGCGGTCGATCCCGTGCAACTCGAAGCAGCTATTTATTTGCACGATATCGGCATGATG
CTGCTTCCGGAATCCATCTGGCTGAAGACCAGCAAGATGTCGCCAGAAGACAAGGTGGCATTGCGCAACCACCCCGGTTT
CGCGGCCGGATTATTGCTGCGTATGCCAGGCTGGGAAATCGCTGCAGAAATGGTCGCCCAACATCACGAAATGCCAGACG
GTGGGGGATATCCCAATCAATTGCAAAACTCGGATATTTGCCCCGGCGCCAAGATTCTCGCTATTGTCGATGCTTTCGAA
GCGGTCATGCTCAAGCACATCCATCGCGGCAAGAACCGTTCGGTGCTTCGCGCGATTGCCGAAATCAACGCTTGCGACAA
CCAGTTTTCCCCTGAGTGGATCGCTCCTTTCAATGCAGTAATTCGCAAGACCATTGAAACCTGA

Upstream 100 bases:

>100_bases
GCTGACGGGGCCCAGTCAAGGCCGAAGGGTCAAGGACACACGCCGTTAAGCCCGCAGTTTGTTAAACTCTTCAGATTAAA
TCAAAACATCGGGAGAGGGC

Downstream 100 bases:

>100_bases
TGAGCTTCGATCGCGAACGTCGTTTCGGAGGCATCACGCGCCTCTATGGTGTCGAGGGTGCAGAACGCATCCAGCAGGCC
AATGTATGCATCGTCGGCAT

Product: metal-dependent phosphohydrolase

Products: NA

Alternate protein names: Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Response Regulator; PAS/PAC Sensor Protein; HD-GYP Domain-Containing Protein; Metal-Dependent Phosphohydrolase; HDIG Domain-Containing Protein; HD-GYP Domain Protein; HD Domain-Containing Protein; Metal Dependent Phophohydrolase; Sensory Box Protein; Response Regulator Receiver Protein; Sensory Protein With HD-GYP Output Domain; Response Regulator CheB; Two-Component Response Regulator Variant; Two-Component Response Regulator; Ggdef Domain; GAF Domain/HD Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; GGDEF/HD Domain-Containing Protein; HAMP Domain/GAF Domain/HD Domain-Containing Protein; Hamp Domain/Gaf Domain/Hd Domain Protein; Hdig Domain Protein; Diguanylate Cyclase; Ggdef Domain/Hd Domain Protein; Metal-Dependent Phosphohydrolase HD Region; Ggdef/Hd Domain Protein; Metal Dependent Phosphohydrolase Domain-Containing Protein; Metal-Dependent Phosphohydrolase Hd Subdomain; HD-Hydrolase Domain-Containing Protein; HAMP Domain-Containing Cyclic Diguanylate Phosphodiesterase; Integral Membrane Protein; HD-GYP/Response Regulator Domain-Containing Protein; Ntr Family Protein Two-Component System Response Regulator; Metal Dependent Phosphohydrolase Domain Protein; GGDEF Domain Sensor Protein; PAS Fold Family Protein; Two Component Response Regulator; HD Domain/HAMP Domain-Containing Protein; Diguanylate Cyclase With GAF Sensor

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MDIRSIVAAAIQNREALEEFAEALNDRAPEIELDVARLKETPLDRDITASLFRAVHNIKGDSSLCKFDLGVAIAHPIETM
MSRFREGEIPFSNMLAELVLLAVDRLELTTDALLTNKPLDNLRLPVLVQGLEELSKETPQQIDFSCANLIEAVTGFPPVI
PEISSQAPKVSAPKSDQKNASSDLQFFRSLALQFESRSPLFKGRTMRILRLALETNKAGNNAVDPVQLEAAIYLHDIGMM
LLPESIWLKTSKMSPEDKVALRNHPGFAAGLLLRMPGWEIAAEMVAQHHEMPDGGGYPNQLQNSDICPGAKILAIVDAFE
AVMLKHIHRGKNRSVLRAIAEINACDNQFSPEWIAPFNAVIRKTIET

Sequences:

>Translated_367_residues
MDIRSIVAAAIQNREALEEFAEALNDRAPEIELDVARLKETPLDRDITASLFRAVHNIKGDSSLCKFDLGVAIAHPIETM
MSRFREGEIPFSNMLAELVLLAVDRLELTTDALLTNKPLDNLRLPVLVQGLEELSKETPQQIDFSCANLIEAVTGFPPVI
PEISSQAPKVSAPKSDQKNASSDLQFFRSLALQFESRSPLFKGRTMRILRLALETNKAGNNAVDPVQLEAAIYLHDIGMM
LLPESIWLKTSKMSPEDKVALRNHPGFAAGLLLRMPGWEIAAEMVAQHHEMPDGGGYPNQLQNSDICPGAKILAIVDAFE
AVMLKHIHRGKNRSVLRAIAEINACDNQFSPEWIAPFNAVIRKTIET
>Mature_367_residues
MDIRSIVAAAIQNREALEEFAEALNDRAPEIELDVARLKETPLDRDITASLFRAVHNIKGDSSLCKFDLGVAIAHPIETM
MSRFREGEIPFSNMLAELVLLAVDRLELTTDALLTNKPLDNLRLPVLVQGLEELSKETPQQIDFSCANLIEAVTGFPPVI
PEISSQAPKVSAPKSDQKNASSDLQFFRSLALQFESRSPLFKGRTMRILRLALETNKAGNNAVDPVQLEAAIYLHDIGMM
LLPESIWLKTSKMSPEDKVALRNHPGFAAGLLLRMPGWEIAAEMVAQHHEMPDGGGYPNQLQNSDICPGAKILAIVDAFE
AVMLKHIHRGKNRSVLRAIAEINACDNQFSPEWIAPFNAVIRKTIET

Specific function: Unknown

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40602; Mature: 40602

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50894 HPT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRSIVAAAIQNREALEEFAEALNDRAPEIELDVARLKETPLDRDITASLFRAVHNIKG
CCHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DSSLCKFDLGVAIAHPIETMMSRFREGEIPFSNMLAELVLLAVDRLELTTDALLTNKPLD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLRLPVLVQGLEELSKETPQQIDFSCANLIEAVTGFPPVIPEISSQAPKVSAPKSDQKNA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SSDLQFFRSLALQFESRSPLFKGRTMRILRLALETNKAGNNAVDPVQLEAAIYLHDIGMM
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LLPESIWLKTSKMSPEDKVALRNHPGFAAGLLLRMPGWEIAAEMVAQHHEMPDGGGYPNQ
HCCHHHHEEECCCCCCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
LQNSDICPGAKILAIVDAFEAVMLKHIHRGKNRSVLRAIAEINACDNQFSPEWIAPFNAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IRKTIET
HHHHHCC
>Mature Secondary Structure
MDIRSIVAAAIQNREALEEFAEALNDRAPEIELDVARLKETPLDRDITASLFRAVHNIKG
CCHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DSSLCKFDLGVAIAHPIETMMSRFREGEIPFSNMLAELVLLAVDRLELTTDALLTNKPLD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLRLPVLVQGLEELSKETPQQIDFSCANLIEAVTGFPPVIPEISSQAPKVSAPKSDQKNA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SSDLQFFRSLALQFESRSPLFKGRTMRILRLALETNKAGNNAVDPVQLEAAIYLHDIGMM
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LLPESIWLKTSKMSPEDKVALRNHPGFAAGLLLRMPGWEIAAEMVAQHHEMPDGGGYPNQ
HCCHHHHEEECCCCCCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
LQNSDICPGAKILAIVDAFEAVMLKHIHRGKNRSVLRAIAEINACDNQFSPEWIAPFNAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IRKTIET
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA