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The map label for this gene is slmA [H]

Identifier: 71906267

GI number: 71906267

Start: 692211

End: 692819

Strand: Reverse

Name: slmA [H]

Synonym: Daro_0627

Alternate gene names: 71906267

Gene position: 692819-692211 (Counterclockwise)

Preceding gene: 71906268

Following gene: 71906264

Centisome position: 15.39

GC content: 58.62

Gene sequence:

>609_bases
ATGGCGAAAAAACCGGGCGAACGCCGCCTGCAAATCCTGCAGACGCTGGCGGAAATGCTGGAAACTCCGAAGGGGGAGAA
AATCACCACCGCCGCCCTGGCCGGCAAACTGGAATGCTCAGAAGCAGCCCTTTACCGCCACTTCGCCAGCAAGGCACAGA
TGTTCGAGGGATTGATCGAATTCATCGAACAAAGCCTGTTCAGCGTGATCAACCAGATCACCACCGAGGAAACTGAAGGC
TTCAAGCAAATCGAATTGATCATCGGCCTCTTGCTGCGCTTCGCCCAGAAAAACCGCGGCATGACTCGCGTGCTGATCGG
CGATGCCCTGGTCAATGAAAACGAACGTCTGCAAATACGCATCAACGCCCTGCTCGACAAGGTCGAAGCCGCCCTGAAGC
AAGCCTTGCGGATCGCCGCAACCCAGGAAAACCTCAAGCCAGATACCGACTTCGGCGCCTTGGCCAATCTGCTGCGCTGC
TATGTCGTCGGTCGCTGGGAGCAATATGCGCGCAGTGGCTTCAGCCGCGAACCGCTGACCCAATGGCCGCAGCAATGGCC
CATGCTTTACTTCGCCTGCCTGTCGCAATCCGGCGCGCCGGGCGCCTGA

Upstream 100 bases:

>100_bases
CCTTTGTAGACGTCAAAATTAGCTCTGCCCTACAGTTATCAAAACGCTGTAGCCGATTATAATTTTCGGGCAAAAACCAA
TAATCACAGAGGGGATATTC

Downstream 100 bases:

>100_bases
AAAGATAAAGGGCGGCCAAGGCCGCCCTTTATGCGTACCGCAACGCCACTCAGCGCTTCAGGTATTCGGCCGCATCAAGT
GCGAAGTAAGTCAGGATACC

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAKKPGERRLQILQTLAEMLETPKGEKITTAALAGKLECSEAALYRHFASKAQMFEGLIEFIEQSLFSVINQITTEETEG
FKQIELIIGLLLRFAQKNRGMTRVLIGDALVNENERLQIRINALLDKVEAALKQALRIAATQENLKPDTDFGALANLLRC
YVVGRWEQYARSGFSREPLTQWPQQWPMLYFACLSQSGAPGA

Sequences:

>Translated_202_residues
MAKKPGERRLQILQTLAEMLETPKGEKITTAALAGKLECSEAALYRHFASKAQMFEGLIEFIEQSLFSVINQITTEETEG
FKQIELIIGLLLRFAQKNRGMTRVLIGDALVNENERLQIRINALLDKVEAALKQALRIAATQENLKPDTDFGALANLLRC
YVVGRWEQYARSGFSREPLTQWPQQWPMLYFACLSQSGAPGA
>Mature_201_residues
AKKPGERRLQILQTLAEMLETPKGEKITTAALAGKLECSEAALYRHFASKAQMFEGLIEFIEQSLFSVINQITTEETEGF
KQIELIIGLLLRFAQKNRGMTRVLIGDALVNENERLQIRINALLDKVEAALKQALRIAATQENLKPDTDFGALANLLRCY
VVGRWEQYARSGFSREPLTQWPQQWPMLYFACLSQSGAPGA

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=183, Percent_Identity=44.8087431693989, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22718; Mature: 22586

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKPGERRLQILQTLAEMLETPKGEKITTAALAGKLECSEAALYRHFASKAQMFEGLIE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FIEQSLFSVINQITTEETEGFKQIELIIGLLLRFAQKNRGMTRVLIGDALVNENERLQIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEH
INALLDKVEAALKQALRIAATQENLKPDTDFGALANLLRCYVVGRWEQYARSGFSREPLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QWPQQWPMLYFACLSQSGAPGA
HCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AKKPGERRLQILQTLAEMLETPKGEKITTAALAGKLECSEAALYRHFASKAQMFEGLIE
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FIEQSLFSVINQITTEETEGFKQIELIIGLLLRFAQKNRGMTRVLIGDALVNENERLQIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEH
INALLDKVEAALKQALRIAATQENLKPDTDFGALANLLRCYVVGRWEQYARSGFSREPLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QWPQQWPMLYFACLSQSGAPGA
HCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA