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The map label for this gene is 71906264

Identifier: 71906264

GI number: 71906264

Start: 689616

End: 690251

Strand: Reverse

Name: 71906264

Synonym: Daro_0624

Alternate gene names: NA

Gene position: 690251-689616 (Counterclockwise)

Preceding gene: 71906267

Following gene: 71906263

Centisome position: 15.34

GC content: 58.02

Gene sequence:

>636_bases
ATGATCCGTACAGCGGCAATGGCAATTCTTCTTGCCACCAGTTTCATCACCCACGCTTCTGAAGAAGCCCATGCCAAGGC
AGACCCCGCCAAGGGCAAAGTCATCGCCGAATCCATCTGTGTCGCCTGCCATGGCGCCGATGGCAACAGCCCAGTTTCCG
CTAATCCGAATCTGGCCGGCCAAGGCGAACAATATATTTACAAGCAGCTGAAGAACTTCAAGGCTGCCGACGGCAAGCCG
GCTGCTCGTAACAACCCGATCATGGCAGGCATGGCCGCTCCGCTGTCCGACGAAGACATGAAGAACGTTGCCGCCTGGTT
TGCCAGCCAGAAGCAAAAGCCGGCTGCCGCCAAGGATGAAAAGCAGATTGCATTGGGCCAGAAGATTTGGCGCCAAGGTG
ATTTCAAGAAGGGCGTTCCGGCCTGTGCCGGTTGTCACGGACCGGCTGGCGCCGGCCTACCTGCCCTGTACCCGCGCCTG
TCAGGCCAGTTCCCGGAATATACCGAAGCTCAGCTGAAGACCTTCCGCACTGAAGAGCGCGCCAACGATCCGGAAAAGAT
GATGCGCATGATTGCCGCCAAATTGTCTGACGTCGAAATCAAAGCTGTCGCCGAATACGCCGCTGGCCTGCGCTGA

Upstream 100 bases:

>100_bases
CGGATGACCCGCCTAGGAAAAGGGGAACTAATATAGAATAACAGGTTTGTAACCTCCGTTCCGGCCAAAGCGCCCATAAA
CGCGCATTAGGAGTTCGAAA

Downstream 100 bases:

>100_bases
ACCGCGCTCCCGCAGAGAAAAGGCAGCTTCGGCTGCCTTTTTTGTTTTTCTGTGCTTGGCACTGCACCCCGGGGGGGCTA
GACTGGACATACCCATTCCC

Product: cytochrome c, class I

Products: ferricytochrome c; H2O

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIRTAAMAILLATSFITHASEEAHAKADPAKGKVIAESICVACHGADGNSPVSANPNLAGQGEQYIYKQLKNFKAADGKP
AARNNPIMAGMAAPLSDEDMKNVAAWFASQKQKPAAAKDEKQIALGQKIWRQGDFKKGVPACAGCHGPAGAGLPALYPRL
SGQFPEYTEAQLKTFRTEERANDPEKMMRMIAAKLSDVEIKAVAEYAAGLR

Sequences:

>Translated_211_residues
MIRTAAMAILLATSFITHASEEAHAKADPAKGKVIAESICVACHGADGNSPVSANPNLAGQGEQYIYKQLKNFKAADGKP
AARNNPIMAGMAAPLSDEDMKNVAAWFASQKQKPAAAKDEKQIALGQKIWRQGDFKKGVPACAGCHGPAGAGLPALYPRL
SGQFPEYTEAQLKTFRTEERANDPEKMMRMIAAKLSDVEIKAVAEYAAGLR
>Mature_211_residues
MIRTAAMAILLATSFITHASEEAHAKADPAKGKVIAESICVACHGADGNSPVSANPNLAGQGEQYIYKQLKNFKAADGKP
AARNNPIMAGMAAPLSDEDMKNVAAWFASQKQKPAAAKDEKQIALGQKIWRQGDFKKGVPACAGCHGPAGAGLPALYPRL
SGQFPEYTEAQLKTFRTEERANDPEKMMRMIAAKLSDVEIKAVAEYAAGLR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: 1.9.3.1

Molecular weight: Translated: 22470; Mature: 22470

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTAAMAILLATSFITHASEEAHAKADPAKGKVIAESICVACHGADGNSPVSANPNLAG
CCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCC
QGEQYIYKQLKNFKAADGKPAARNNPIMAGMAAPLSDEDMKNVAAWFASQKQKPAAAKDE
CCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
KQIALGQKIWRQGDFKKGVPACAGCHGPAGAGLPALYPRLSGQFPEYTEAQLKTFRTEER
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
ANDPEKMMRMIAAKLSDVEIKAVAEYAAGLR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIRTAAMAILLATSFITHASEEAHAKADPAKGKVIAESICVACHGADGNSPVSANPNLAG
CCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCC
QGEQYIYKQLKNFKAADGKPAARNNPIMAGMAAPLSDEDMKNVAAWFASQKQKPAAAKDE
CCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
KQIALGQKIWRQGDFKKGVPACAGCHGPAGAGLPALYPRLSGQFPEYTEAQLKTFRTEER
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
ANDPEKMMRMIAAKLSDVEIKAVAEYAAGLR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA