Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71906150

Identifier: 71906150

GI number: 71906150

Start: 570349

End: 571230

Strand: Reverse

Name: 71906150

Synonym: Daro_0510

Alternate gene names: NA

Gene position: 571230-570349 (Counterclockwise)

Preceding gene: 71906151

Following gene: 71906149

Centisome position: 12.69

GC content: 64.4

Gene sequence:

>882_bases
ATGGTCCGCATCCAGTTCGCAATCGATCTGCATTATGAACTGAACTATCCGGGCGCCGATTTCGTTTTCAACATCCACGC
GGCACAGACCGCCAGCCAGGCCATCATCAGCGAAAACCTGGTGGTCAGCCAGCAGGTACCGACGGTCATCCAGACCGCCC
CGGCCACGCACGCCCGCTTCCTGCGCCTGACCGGTGCCCCCGGCCCACTGCACATCAGCTATCAGGCGCTGGTCGATATC
GACCACCATATCGGCAACCCGGACCTGATTCCGGAAACGCCGATCGGCCAATTGCCGCTCTCGGTACTGAACTACATCTA
CCCCAGCCGCTACTGCCAGTCCGACCGCCTCGCCAATCTTTCGATGAGCGAATTCGGCCATCTGCCCAAGGGCTATCGGC
GCGTCGAAGCCATCCGCAACTGGGTGAACAAGCACGTCGCCTTCCGCAGCAACACCACGAGCTCGACCACATCAGCGCTC
GATACGGTGACCGATCGCGTCGGCGTCTGCCGCGACTTCGCGCACCTGATGATCGCCATCTGCCGCGCGCTGAGCATTCC
GGCCCGCTTCACGACCGGGATCGACTACGGCGCCGATCCGGCCCTCGGCCCGACCGACTTCCATGCCTACGTCGAGGTCT
TCCTCGGCGGTCGCTGGTACATGTTCGACCCGTCCGGCACCGCCATTCCGATGGGCTTCGTCCGCCTGGGTACCGGGCGC
GACGCGGCCGATGTGTCCTACGCCACCATCTTCGGCAGCGTCTCCTCGCCGCCGCCGTTGATTTCCGTCACTGCCATCAC
CGAACCCGGCCGCCCGTGGGAATTACCCCGCCACCGGCCGGAGGCGATTTCGACCGATGCTTCACCGGTCGACGCCGGCT
AA

Upstream 100 bases:

>100_bases
GCCGTACTGATCATTTCCCCGTCGCAAAGCGCCGTTTTATTGCTCGCTTGAGCGCTTCCGGCTTTTCCGGACTTCCGGAT
GCCGTCACTTTGGGGAATAC

Downstream 100 bases:

>100_bases
ACCCCATTTTTCAATTACTGGAGAAAACACTTGGCTAAAGAAGAACTACTTGAAATGCAAGGCGTCGTGAACGACGTCCT
CCCCGACACCCGCTTCCGCG

Product: transglutaminase-like

Products: NA

Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase; Transglutaminase/Protease-Like Protein; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Transglutaminase/Protease; Transglutaminase-Like Cysteine Protease; IMP Dehydrogenase; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase DomaiN-Containing Protein; Transglutaminase-Like S Cysteine Protease; Cystein Protease

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARFLRLTGAPGPLHISYQALVDI
DHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANLSMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSAL
DTVTDRVGVCRDFAHLMIAICRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR
DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG

Sequences:

>Translated_293_residues
MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARFLRLTGAPGPLHISYQALVDI
DHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANLSMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSAL
DTVTDRVGVCRDFAHLMIAICRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR
DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG
>Mature_293_residues
MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARFLRLTGAPGPLHISYQALVDI
DHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANLSMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSAL
DTVTDRVGVCRDFAHLMIAICRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR
DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31986; Mature: 31986

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARF
CEEEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCCEEE
LRLTGAPGPLHISYQALVDIDHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANL
EEEECCCCCEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
SMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSALDTVTDRVGVCRDFAHLMIAI
CHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR
HHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEECCCCCEEEEEEEEECCCC
DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG
CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARF
CEEEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCCEEE
LRLTGAPGPLHISYQALVDIDHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANL
EEEECCCCCEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
SMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSALDTVTDRVGVCRDFAHLMIAI
CHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR
HHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEECCCCCEEEEEEEEECCCC
DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG
CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA