| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is bluB [H]
Identifier: 71905783
GI number: 71905783
Start: 154800
End: 155774
Strand: Reverse
Name: bluB [H]
Synonym: Daro_0141
Alternate gene names: 71905783
Gene position: 155774-154800 (Counterclockwise)
Preceding gene: 71905784
Following gene: 71905782
Centisome position: 3.46
GC content: 62.36
Gene sequence:
>975_bases ATGTCTCTCGGTGCCCGGCCGATTTATCGGCGGGAGAATCGGGAAGGCGGTGCAAATCCGCCGCGTGCCCAACGCTGTAA GGAGGACGGGCGATGCGAAAAGCCACTGGTCAGGGAAAACCCGGCCGGGAAGGCGCATCGGCCGGGTGAATCCGAGTCAG AAGACCGGCCGGGAGACGAAACCGGGCTGCATGGACAAGCAGTCATCGTTTTTCCACAAGGGGAATTCATGGAAAACCAG ATTGACCATTCGTTTTCGGACGCCGAGCGCGCCGCCATCTATCGCACCATTTTCAATCGCCGCGACGTGCGCGGCCAGTT CCTGCCGGATCCGGTGCCGGACGAGGTGCTCAGCCGCGTACTGATGGCCGCCCACCATGCGCCATCGGTCGGTTTCATGC AACCGTGGAACTTTCTGCTCGTCCGCTCGCCCGAGGTCAAGCAGCGGGTCCGCGACATCTTCGCCAAGGCGCATGCGGAA GCCGCGATGATGTTCCCGGAGGGCAAGCGGGAAACCTACAACCAGCTCAAGCTCGAAGGCATCGTCGAATCGCCGATTAA CCTGTGCATCACCTGCGACCGCGAACGGACCGGCCCGGTCGTCGTCGGCCGCACCCATATCAAGACGATGGACCTCTACT CCAGCGTCTGCGCCGTGCAAAACCTGTGGCTGGCCGCCCGCGCCGAAGGACTGGGCGTCGGCTGGGTCAGCATTTTCAAC CAGCCGGAACTGCAGGCAGCGCTTGGTATCCCGAGCGAGATCGTGCCCATTGCCTACCTGTGCATCGGTTACGTCAGCCA TTTCCACGACAAGCCGGAACTGGAAAAGACCGGCTGGCTGCCCCGCCTGCCGATTGCCGATCTGCTCTACTACGACCAGT GGGGCCAGGCCGATGTCGCCCGGAATGAGTCGCTGACCAACACGCTCGCCACCATGCAGGACGATATCCAGCAACGGGGC ATCTTCCCGAAATGA
Upstream 100 bases:
>100_bases GACGATAGGCGAATGAACGGCAGCGGCACTTTCATTGGGAAAGCAGCTCGCTTCTCCATGACTTGCCTGCCAGCCTAGGG TCGCTTAGCATCCGGCCTTT
Downstream 100 bases:
>100_bases TGATGCCCGAGGGTGCCCTTGCCATGCCGGCCGCCGCCCTGGTCGCCGTGCTGCTCGACCGCCTGCTCGGCGAAGTGCGC CGTTTCCATCCGCTCGTTGG
Product: cob(II)yrinic acid a,c-diamide reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDETGLHGQAVIVFPQGEFMENQ IDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRVLMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAE AAMMFPEGKRETYNQLKLEGIVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVARNESLTNTLATMQDDIQQRG IFPK
Sequences:
>Translated_324_residues MSLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDETGLHGQAVIVFPQGEFMENQ IDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRVLMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAE AAMMFPEGKRETYNQLKLEGIVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVARNESLTNTLATMQDDIQQRG IFPK >Mature_323_residues SLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDETGLHGQAVIVFPQGEFMENQI DHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRVLMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAEA AMMFPEGKRETYNQLKLEGIVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFNQ PELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVARNESLTNTLATMQDDIQQRGI FPK
Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012825 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.16.8.1 [H]
Molecular weight: Translated: 36439; Mature: 36308
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDE CCCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGLHGQAVIVFPQGEFMENQIDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRV CCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH LMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAEAAMMFPEGKRETYNQLKLEG HHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH IVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN HHHCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVA CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCCCHHH RNESLTNTLATMQDDIQQRGIFPK CCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDE CCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGLHGQAVIVFPQGEFMENQIDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRV CCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH LMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAEAAMMFPEGKRETYNQLKLEG HHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH IVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN HHHCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVA CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCCCHHH RNESLTNTLATMQDDIQQRGIFPK CCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7635831; 9256491 [H]