| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905737
Identifier: 71905737
GI number: 71905737
Start: 111562
End: 112383
Strand: Reverse
Name: 71905737
Synonym: Daro_0095
Alternate gene names: NA
Gene position: 112383-111562 (Counterclockwise)
Preceding gene: 71905738
Following gene: 71905736
Centisome position: 2.5
GC content: 50.49
Gene sequence:
>822_bases ATGGCCAAATACGAAACAAACGATACCTCGCCCCGCCGACTCGCTGTATTAATCGATGCAGACAACGCGCAAGCTACCGT TATCGAAGGCTTATTGGCTGAGGTCGCCCGTTTTGGTGAGGCGACGGTTAAACGTATATATGGCGACTTCACTTCGCCTA GCAGTTCCCAATGGAAGAAGGTTCTGAACCAGCATGCGATCAAGCCAGTTCAGCAATTTGCCTATACAACAGGGAAAAAT GCGACGGATAGCACGATGATTATCGATGCGATGGATTTGCTATATACGCGCCGATTCGATGGTTTTTGTCTTGTATCAAG CGATAGTGATTTTACCGGACTCGCACTGCGTATCCGCGAAGAAGGGCTGACTGTCCTGGGTTTTGGTGAGGAGAAAACCC CTGATGCTTTCCGCAACGCGTGCCACAAATTCATTTTCACCGAAATATTACGCCCACTTCCTGCTGTCGAGACCGTAGAG TCTTCAAGGCCAGCAGCCATCGAAAAACTCGACCCGCAAATCCCCCACCCACCATCGACTCCGGTCAAAAACAGTGCGGC CAAGAAGCCACTGCCTATCCAGTTCGTCGTACAGGCACTTGATCAGGCTGAAGATGATGATGGCTGGGCCAATTTGGGCG CTTTCGGCAGCTACCTGACAAAGCTGCAACCGGATTTCGATCCGCGACTATATGGCTTCAAAAAATTGAGCGATTTGGTT AAGTCCAAACCACACGTCTTCACGGTTGAAGAACGCCCCGTTGCCGGAAGCAACATCAAGGTTGTCTACGTTCGTCGAAC ACCAAGCAAATCAGGTCACTGA
Upstream 100 bases:
>100_bases TGGCCGCAGCATCGCCAGCGAGTAACAAATTTGGGCGCTGGAGAATGGGCTCAGCACCCAATCTCCAGCGCTAGCACCTT CAGAAAATTCCGGAGAGCCA
Downstream 100 bases:
>100_bases TCCCAACAAAACAAACACTGTGAGACAAAGATATGTCAGAACCTATTGATTTCTACTTCGATTTTTCCAGCCCCTACGGC TACCTGATGAGCGAGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAKYETNDTSPRRLAVLIDADNAQATVIEGLLAEVARFGEATVKRIYGDFTSPSSSQWKKVLNQHAIKPVQQFAYTTGKN ATDSTMIIDAMDLLYTRRFDGFCLVSSDSDFTGLALRIREEGLTVLGFGEEKTPDAFRNACHKFIFTEILRPLPAVETVE SSRPAAIEKLDPQIPHPPSTPVKNSAAKKPLPIQFVVQALDQAEDDDGWANLGAFGSYLTKLQPDFDPRLYGFKKLSDLV KSKPHVFTVEERPVAGSNIKVVYVRRTPSKSGH
Sequences:
>Translated_273_residues MAKYETNDTSPRRLAVLIDADNAQATVIEGLLAEVARFGEATVKRIYGDFTSPSSSQWKKVLNQHAIKPVQQFAYTTGKN ATDSTMIIDAMDLLYTRRFDGFCLVSSDSDFTGLALRIREEGLTVLGFGEEKTPDAFRNACHKFIFTEILRPLPAVETVE SSRPAAIEKLDPQIPHPPSTPVKNSAAKKPLPIQFVVQALDQAEDDDGWANLGAFGSYLTKLQPDFDPRLYGFKKLSDLV KSKPHVFTVEERPVAGSNIKVVYVRRTPSKSGH >Mature_272_residues AKYETNDTSPRRLAVLIDADNAQATVIEGLLAEVARFGEATVKRIYGDFTSPSSSQWKKVLNQHAIKPVQQFAYTTGKNA TDSTMIIDAMDLLYTRRFDGFCLVSSDSDFTGLALRIREEGLTVLGFGEEKTPDAFRNACHKFIFTEILRPLPAVETVES SRPAAIEKLDPQIPHPPSTPVKNSAAKKPLPIQFVVQALDQAEDDDGWANLGAFGSYLTKLQPDFDPRLYGFKKLSDLVK SKPHVFTVEERPVAGSNIKVVYVRRTPSKSGH
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30232; Mature: 30100
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYETNDTSPRRLAVLIDADNAQATVIEGLLAEVARFGEATVKRIYGDFTSPSSSQWKK CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLNQHAIKPVQQFAYTTGKNATDSTMIIDAMDLLYTRRFDGFCLVSSDSDFTGLALRIRE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC EGLTVLGFGEEKTPDAFRNACHKFIFTEILRPLPAVETVESSRPAAIEKLDPQIPHPPST CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCCCCC PVKNSAAKKPLPIQFVVQALDQAEDDDGWANLGAFGSYLTKLQPDFDPRLYGFKKLSDLV CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KSKPHVFTVEERPVAGSNIKVVYVRRTPSKSGH HCCCCEEEECCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure AKYETNDTSPRRLAVLIDADNAQATVIEGLLAEVARFGEATVKRIYGDFTSPSSSQWKK CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH VLNQHAIKPVQQFAYTTGKNATDSTMIIDAMDLLYTRRFDGFCLVSSDSDFTGLALRIRE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEC EGLTVLGFGEEKTPDAFRNACHKFIFTEILRPLPAVETVESSRPAAIEKLDPQIPHPPST CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCCCCC PVKNSAAKKPLPIQFVVQALDQAEDDDGWANLGAFGSYLTKLQPDFDPRLYGFKKLSDLV CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KSKPHVFTVEERPVAGSNIKVVYVRRTPSKSGH HCCCCEEEECCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA