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The map label for this gene is mmgC [H]

Identifier: 71905738

GI number: 71905738

Start: 112459

End: 113595

Strand: Reverse

Name: mmgC [H]

Synonym: Daro_0096

Alternate gene names: 71905738

Gene position: 113595-112459 (Counterclockwise)

Preceding gene: 71905739

Following gene: 71905737

Centisome position: 2.52

GC content: 62.53

Gene sequence:

>1137_bases
ATGATTCTGACCCAAGAACAAGAAATGATCCGTGACTCGATGCGCGCCTTCGCGCAGGAGCGCCTCGCCCCCTTCGCCGC
CGAATGGGACAAGAACCATACCTTTCCGGCCGAGGCCCTGAAGGAACTCGGCGAACTGGGCGCCATGGGCATGGTTGTGC
CCGAGGAATGGGGCGGTGCCGGCATGGATTACATGTCGCTGGTGCTGACGCTGGAAGAAATCGCGGCTGGCGACGGCGCC
ACCTCGACCATCGTCTCGGTCCAGAATTCGCTGGCCTGCGGCATTACTGCCAAGTACGGCACCGACGCGCAGAAGGAAGA
ATGGCTGAAGCCGCTGGCCCGTGGCGAAAAACTGGGCTGTTTCTGCCTGACCGAGCCGCATACCGGCTCCGACGCCGCCG
CGATCACCACGCGCGCCGACCGCGATGGCGACCATTTCGTGCTGAATGGCGTCAAGCAGTTCATCACCACTGGCAAGTAC
GCCCACATGGCCATCGTCTTTGCCGTCACCGACAAGGCCGCGGGCAAAAAGGGCATCTCCTGCTTCCTGATCCCGACCGA
TACCAAGGGCTTCATCGTCGGTCGCACCGAGGACAAGATGGGCCAGCACGCCTCCGACACCGTACAGATCATTTTTGAAG
ACTGTCGTGTGCCGGCTTCCGCCCTGCTCGGCAAGGAAGGCGAAGGCTACAAGATCGCCCTGTCCAATCTCGAAGCCGGC
CGCATCGGCATCGCTTCGCAAAGCATCGGCATGGCCCGCGCCGCCTTCGAAGCAGCGGTGCGTTACGCCAAGGAACGGGT
CACCTTCGGCGTGCCGATCATCGAGCACCAGGCCGTCAATTTCCGTTTGGCCGACATGAACACCTTGCTCGACGCGGCCC
GCCTGATGGTCTGGCGCGCCGCCATGCTCAAGGATGCCGGCAAGCCCTGCCTGAAGGAAGCCTCGATGGCCAAGATGTTC
GCCTCCGAAGCTGCCGAGAAGATCGCCTCCGACGCCATCCAGATCCACGGCGGCGTCGGCTACACCAGCGATTTCCCGGT
CGAACGCATCTATCGTGATGTCCGCATCTGCCAGATCTATGAGGGCGCCAACGACATCCAGCGGCTGGTCATTGGCCGCA
GCATCGCCAGCGAGTAA

Upstream 100 bases:

>100_bases
TCGACGAGCGCCTTGGCCTGCCCGTGCTGTTCGGCGGCCTGCTGGTCATCGCCGGTGTCTGGCTGACCACGAAACAAAAG
ATTTCTTTGGAGATAAGCAA

Downstream 100 bases:

>100_bases
CAAATTTGGGCGCTGGAGAATGGGCTCAGCACCCAATCTCCAGCGCTAGCACCTTCAGAAAATTCCGGAGAGCCAATGGC
CAAATACGAAACAAACGATA

Product: Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MILTQEQEMIRDSMRAFAQERLAPFAAEWDKNHTFPAEALKELGELGAMGMVVPEEWGGAGMDYMSLVLTLEEIAAGDGA
TSTIVSVQNSLACGITAKYGTDAQKEEWLKPLARGEKLGCFCLTEPHTGSDAAAITTRADRDGDHFVLNGVKQFITTGKY
AHMAIVFAVTDKAAGKKGISCFLIPTDTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSNLEAG
RIGIASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDAARLMVWRAAMLKDAGKPCLKEASMAKMF
ASEAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIYEGANDIQRLVIGRSIASE

Sequences:

>Translated_378_residues
MILTQEQEMIRDSMRAFAQERLAPFAAEWDKNHTFPAEALKELGELGAMGMVVPEEWGGAGMDYMSLVLTLEEIAAGDGA
TSTIVSVQNSLACGITAKYGTDAQKEEWLKPLARGEKLGCFCLTEPHTGSDAAAITTRADRDGDHFVLNGVKQFITTGKY
AHMAIVFAVTDKAAGKKGISCFLIPTDTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSNLEAG
RIGIASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDAARLMVWRAAMLKDAGKPCLKEASMAKMF
ASEAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIYEGANDIQRLVIGRSIASE
>Mature_378_residues
MILTQEQEMIRDSMRAFAQERLAPFAAEWDKNHTFPAEALKELGELGAMGMVVPEEWGGAGMDYMSLVLTLEEIAAGDGA
TSTIVSVQNSLACGITAKYGTDAQKEEWLKPLARGEKLGCFCLTEPHTGSDAAAITTRADRDGDHFVLNGVKQFITTGKY
AHMAIVFAVTDKAAGKKGISCFLIPTDTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSNLEAG
RIGIASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDAARLMVWRAAMLKDAGKPCLKEASMAKMF
ASEAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIYEGANDIQRLVIGRSIASE

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=369, Percent_Identity=50.9485094850949, Blast_Score=394, Evalue=1e-110,
Organism=Homo sapiens, GI4501859, Length=376, Percent_Identity=42.8191489361702, Blast_Score=325, Evalue=5e-89,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=38.5026737967914, Blast_Score=271, Evalue=7e-73,
Organism=Homo sapiens, GI7656849, Length=379, Percent_Identity=38.2585751978892, Blast_Score=271, Evalue=8e-73,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=38.5026737967914, Blast_Score=271, Evalue=9e-73,
Organism=Homo sapiens, GI226958412, Length=380, Percent_Identity=36.0526315789474, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI226958414, Length=343, Percent_Identity=35.5685131195335, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=35.1063829787234, Blast_Score=234, Evalue=7e-62,
Organism=Homo sapiens, GI21361497, Length=350, Percent_Identity=37.7142857142857, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI4557235, Length=337, Percent_Identity=38.2789317507418, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI76496475, Length=337, Percent_Identity=38.2789317507418, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI4503943, Length=376, Percent_Identity=32.4468085106383, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI7669494, Length=362, Percent_Identity=31.767955801105, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38505218, Length=286, Percent_Identity=31.8181818181818, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI48976061, Length=291, Percent_Identity=30.9278350515464, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI211971008, Length=291, Percent_Identity=30.9278350515464, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI218563752, Length=257, Percent_Identity=28.4046692607004, Blast_Score=82, Evalue=7e-16,
Organism=Escherichia coli, GI87081958, Length=379, Percent_Identity=32.1899736147757, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1786223, Length=377, Percent_Identity=28.1167108753316, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI87081702, Length=362, Percent_Identity=29.0055248618785, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI87082384, Length=300, Percent_Identity=28.3333333333333, Blast_Score=102, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=38.9920424403183, Blast_Score=294, Evalue=6e-80,
Organism=Caenorhabditis elegans, GI17508101, Length=376, Percent_Identity=39.6276595744681, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17534899, Length=376, Percent_Identity=38.031914893617, Blast_Score=268, Evalue=5e-72,
Organism=Caenorhabditis elegans, GI17569725, Length=375, Percent_Identity=37.6, Blast_Score=262, Evalue=3e-70,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=37.2340425531915, Blast_Score=261, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=8e-68,
Organism=Caenorhabditis elegans, GI17533517, Length=378, Percent_Identity=35.978835978836, Blast_Score=252, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=41.726618705036, Blast_Score=231, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI71985184, Length=349, Percent_Identity=37.2492836676218, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=31.8302387267904, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17505929, Length=377, Percent_Identity=29.4429708222812, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI71982178, Length=273, Percent_Identity=33.6996336996337, Blast_Score=190, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=40.6926406926407, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=30.5851063829787, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71985192, Length=297, Percent_Identity=34.006734006734, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17531909, Length=244, Percent_Identity=36.4754098360656, Blast_Score=157, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17562446, Length=292, Percent_Identity=29.7945205479452, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17531913, Length=182, Percent_Identity=36.2637362637363, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=48.936170212766, Blast_Score=380, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=44.6808510638298, Blast_Score=344, Evalue=7e-95,
Organism=Drosophila melanogaster, GI24666513, Length=377, Percent_Identity=39.2572944297082, Blast_Score=291, Evalue=6e-79,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=40.4761904761905, Blast_Score=270, Evalue=1e-72,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=35.2631578947368, Blast_Score=234, Evalue=8e-62,
Organism=Drosophila melanogaster, GI281363737, Length=387, Percent_Identity=35.6589147286822, Blast_Score=221, Evalue=4e-58,
Organism=Drosophila melanogaster, GI19920834, Length=377, Percent_Identity=31.5649867374005, Blast_Score=166, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40928; Mature: 40928

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTQEQEMIRDSMRAFAQERLAPFAAEWDKNHTFPAEALKELGELGAMGMVVPEEWGGA
CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GMDYMSLVLTLEEIAAGDGATSTIVSVQNSLACGITAKYGTDAQKEEWLKPLARGEKLGC
CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECEEECCCCCCHHHHHHHHHHCCCCCEE
FCLTEPHTGSDAAAITTRADRDGDHFVLNGVKQFITTGKYAHMAIVFAVTDKAAGKKGIS
EEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHEEEEEEEEECCCCCCCCCE
CFLIPTDTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSNLEAG
EEEEECCCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC
RIGIASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDAARLMVWRA
CEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHH
AMLKDAGKPCLKEASMAKMFASEAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHEEEE
EGANDIQRLVIGRSIASE
CCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILTQEQEMIRDSMRAFAQERLAPFAAEWDKNHTFPAEALKELGELGAMGMVVPEEWGGA
CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GMDYMSLVLTLEEIAAGDGATSTIVSVQNSLACGITAKYGTDAQKEEWLKPLARGEKLGC
CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECEEECCCCCCHHHHHHHHHHCCCCCEE
FCLTEPHTGSDAAAITTRADRDGDHFVLNGVKQFITTGKYAHMAIVFAVTDKAAGKKGIS
EEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHEEEEEEEEECCCCCCCCCE
CFLIPTDTKGFIVGRTEDKMGQHASDTVQIIFEDCRVPASALLGKEGEGYKIALSNLEAG
EEEEECCCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC
RIGIASQSIGMARAAFEAAVRYAKERVTFGVPIIEHQAVNFRLADMNTLLDAARLMVWRA
CEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHH
AMLKDAGKPCLKEASMAKMFASEAAEKIASDAIQIHGGVGYTSDFPVERIYRDVRICQIY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHEEEE
EGANDIQRLVIGRSIASE
CCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]