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The map label for this gene is frr

Identifier: 71892056

GI number: 71892056

Start: 327793

End: 328359

Strand: Direct

Name: frr

Synonym: BPEN_282

Alternate gene names: 71892056

Gene position: 327793-328359 (Clockwise)

Preceding gene: 71892055

Following gene: 71892057

Centisome position: 41.41

GC content: 27.16

Gene sequence:

>567_bases
GTGATTAATAAAATTGATAATATTCAGACAGATTCGGAAATACATATGAAAAAATGTATTAAAAACTTTAAAACAAATAT
CAATAATATTCATATAGGACGTATTTCTCCAAATATATTAAATAACATCCGAGTAGACTACTATGGAATATCCACTCCAT
TATCTCAAGTAGCAAATGCCATAGTAGAAGATTCACGTACTTTAGCTATTACAGTGTTTGACCATCAGTTGATCAAATCA
ACTGAAAAAGCTATTTTTATGTCTGATTTGGAATTAATTCCTATTTCTTATGGAAATACTATTCGAGTAACATTACCTGC
ATTAACTGAAGAACGTCGTCATACTTTAATAAAAATGGTACGAACTGAAGCAGAAAAAAGTAAAATAGCTGTAAGAAGTG
TGCGTCGTATTGCTAATGATAAAACCAAAATTTTACTTAAAAACAAAGAAATTAATGAAGACGAAGAGCATTTTTTTCAA
AATGAAATTCAAAAGTTAACTAATATTTGGATTAAAGAAATTGATATTATTCTCGCGGAAAAAGAATCAGAATTAATGAA
ATTTTAA

Upstream 100 bases:

>100_bases
TTAATAACCAAATAATTTAAAGATGTGCGACATTCAAATAAATACTTAAATTTATATAAATTGATTTTTAATTTAGAAAT
ATAAATCAGAGGTATATGAT

Downstream 100 bases:

>100_bases
GTATTAAATTGTGCGTTGATAGATATTTATATATGTACTAACATAAATAATAGATTTTTATCTTTACACCCAATGAGTAA
TTTAATTTATACATATGCAA

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MINKIDNIQTDSEIHMKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANAIVEDSRTLAITVFDHQLIKS
TEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMVRTEAEKSKIAVRSVRRIANDKTKILLKNKEINEDEEHFFQ
NEIQKLTNIWIKEIDIILAEKESELMKF

Sequences:

>Translated_188_residues
MINKIDNIQTDSEIHMKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANAIVEDSRTLAITVFDHQLIKS
TEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMVRTEAEKSKIAVRSVRRIANDKTKILLKNKEINEDEEHFFQ
NEIQKLTNIWIKEIDIILAEKESELMKF
>Mature_188_residues
MINKIDNIQTDSEIHMKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANAIVEDSRTLAITVFDHQLIKS
TEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMVRTEAEKSKIAVRSVRRIANDKTKILLKNKEINEDEEHFFQ
NEIQKLTNIWIKEIDIILAEKESELMKF

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family

Homologues:

Organism=Escherichia coli, GI1786368, Length=184, Percent_Identity=55.4347826086957, Blast_Score=213, Evalue=9e-57,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): RRF_BLOPB (Q493C9)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277786.1
- ProteinModelPortal:   Q493C9
- SMR:   Q493C9
- STRING:   Q493C9
- GeneID:   3563219
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_282
- eggNOG:   COG0233
- HOGENOM:   HBG533975
- OMA:   YYGAETP
- ProtClustDB:   CLSK280782
- BioCyc:   CBLO291272:BPEN_282-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00040
- InterPro:   IPR002661
- InterPro:   IPR015998
- PANTHER:   PTHR20982
- PANTHER:   PTHR20982:SF3
- TIGRFAMs:   TIGR00496

Pfam domain/function: PF01765 RRF; SSF55194 Ribosome_recyc_fac

EC number: NA

Molecular weight: Translated: 21832; Mature: 21832

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKIDNIQTDSEIHMKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCEEEEEECCCHHHHHHHH
IVEDSRTLAITVFDHQLIKSTEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMV
HHCCCCEEEEEEECHHHHHHHHHHHEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHHH
RTEAEKSKIAVRSVRRIANDKTKILLKNKEINEDEEHFFQNEIQKLTNIWIKEIDIILAE
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
KESELMKF
CHHHHHCC
>Mature Secondary Structure
MINKIDNIQTDSEIHMKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCEEEEEECCCHHHHHHHH
IVEDSRTLAITVFDHQLIKSTEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMV
HHCCCCEEEEEEECHHHHHHHHHHHEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHHH
RTEAEKSKIAVRSVRRIANDKTKILLKNKEINEDEEHFFQNEIQKLTNIWIKEIDIILAE
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
KESELMKF
CHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA