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The map label for this gene is secF [H]

Identifier: 71892013

GI number: 71892013

Start: 270024

End: 270941

Strand: Direct

Name: secF [H]

Synonym: BPEN_239

Alternate gene names: 71892013

Gene position: 270024-270941 (Clockwise)

Preceding gene: 71892012

Following gene: 71892014

Centisome position: 34.11

GC content: 27.67

Gene sequence:

>918_bases
ATGAGTGAAAGTTATTATAAAATTTATGATTTTCTTGCATGGAAACGTTTAATATTTTTTTTATCGATATTTTTATTCTT
TATTTCATGCTGTACTATGATAACGCGTGGTTTTAACTGGGGTCTAGATTTTACTGGAGGTATGTTAGTTGAAATTAGTT
CAGAAAAAGATGTAAATCTCATTAATATTCAAAATATTTTAGTTCAATCAGGATTCAAAAATCCTATCGTGCAACATTTT
GGTTCTCAGAAAGATATTATGATACGATTACCATTGGATCCTAATGAAAATAAGATTAATCAACATACTATAAGCAAAGT
ACTATATGCCTTACGGCAAGGTATTGTTCAAAATTTTTTCGTTAAACAAGTAAATTGGATTGGTCCTAGCGTCCATAGTC
AACTGATAAATACAGGAATAATAGCGTTATTAGTCGCATTAATATGTATCTTAGTATATATAACTTTTCGTTTTGAATGG
AGATTAGCAACTGGAGTAGTCATATCTTTAATATATGATATGATAGTTATTTTAGGTATATTATCTTTATTTGCTATTAA
AATAGATTCCACCATTATTGCTGCCCTAATGTCAGCAATTGGTTATTCTATTAATGATAAAATTGTCATTTTTGATAGAA
TTAGAGAAAATTTCTATTATACACCTGTATCAAAATCTATAGATATATTTAATATCTCATTGAGTCAAGTATTAAGTAGA
ACTATTATAACTTCAGTTACAACTATTATGGTACTACTGATACTACTAATTTGGGGGGGGGATATATTACACGGATTTGC
GGTTACTTTATTACTTGGAACTATTATTGGCACAGTATCATCTATATATATAGCTTCTGCGTTAGCATTTAAATTTGGTA
CTGCACGTAATCATTTTATAAAAATTAACAAAAAATAA

Upstream 100 bases:

>100_bases
GTCTACGGGAAAAGACGTATTAATAAGCTATCCATTTAACTTTTTACGTTTTTAGATCATATATACCGGTTTTATACATT
TTAATTGAATTTTTTTTAAA

Downstream 100 bases:

>100_bases
AATTTTTCACTACTGATTTTATATTTTTGCTTAACAAACATCAAAAATGTAATAGTATTTTTGCTACTATATCAACACTG
ATTGATATTACTGTTAAACA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSESYYKIYDFLAWKRLIFFLSIFLFFISCCTMITRGFNWGLDFTGGMLVEISSEKDVNLINIQNILVQSGFKNPIVQHF
GSQKDIMIRLPLDPNENKINQHTISKVLYALRQGIVQNFFVKQVNWIGPSVHSQLINTGIIALLVALICILVYITFRFEW
RLATGVVISLIYDMIVILGILSLFAIKIDSTIIAALMSAIGYSINDKIVIFDRIRENFYYTPVSKSIDIFNISLSQVLSR
TIITSVTTIMVLLILLIWGGDILHGFAVTLLLGTIIGTVSSIYIASALAFKFGTARNHFIKINKK

Sequences:

>Translated_305_residues
MSESYYKIYDFLAWKRLIFFLSIFLFFISCCTMITRGFNWGLDFTGGMLVEISSEKDVNLINIQNILVQSGFKNPIVQHF
GSQKDIMIRLPLDPNENKINQHTISKVLYALRQGIVQNFFVKQVNWIGPSVHSQLINTGIIALLVALICILVYITFRFEW
RLATGVVISLIYDMIVILGILSLFAIKIDSTIIAALMSAIGYSINDKIVIFDRIRENFYYTPVSKSIDIFNISLSQVLSR
TIITSVTTIMVLLILLIWGGDILHGFAVTLLLGTIIGTVSSIYIASALAFKFGTARNHFIKINKK
>Mature_304_residues
SESYYKIYDFLAWKRLIFFLSIFLFFISCCTMITRGFNWGLDFTGGMLVEISSEKDVNLINIQNILVQSGFKNPIVQHFG
SQKDIMIRLPLDPNENKINQHTISKVLYALRQGIVQNFFVKQVNWIGPSVHSQLINTGIIALLVALICILVYITFRFEWR
LATGVVISLIYDMIVILGILSLFAIKIDSTIIAALMSAIGYSINDKIVIFDRIRENFYYTPVSKSIDIFNISLSQVLSRT
IITSVTTIMVLLILLIWGGDILHGFAVTLLLGTIIGTVSSIYIASALAFKFGTARNHFIKINKK

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=302, Percent_Identity=50.3311258278146, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34469; Mature: 34337

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESYYKIYDFLAWKRLIFFLSIFLFFISCCTMITRGFNWGLDFTGGMLVEISSEKDVNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEE
INIQNILVQSGFKNPIVQHFGSQKDIMIRLPLDPNENKINQHTISKVLYALRQGIVQNFF
EHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKQVNWIGPSVHSQLINTGIIALLVALICILVYITFRFEWRLATGVVISLIYDMIVILGI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLFAIKIDSTIIAALMSAIGYSINDKIVIFDRIRENFYYTPVSKSIDIFNISLSQVLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCEEECCCCCCCEEEECCHHHHHHH
TIITSVTTIMVLLILLIWGGDILHGFAVTLLLGTIIGTVSSIYIASALAFKFGTARNHFI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
KINKK
EEECC
>Mature Secondary Structure 
SESYYKIYDFLAWKRLIFFLSIFLFFISCCTMITRGFNWGLDFTGGMLVEISSEKDVNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEE
INIQNILVQSGFKNPIVQHFGSQKDIMIRLPLDPNENKINQHTISKVLYALRQGIVQNFF
EHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKQVNWIGPSVHSQLINTGIIALLVALICILVYITFRFEWRLATGVVISLIYDMIVILGI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLFAIKIDSTIIAALMSAIGYSINDKIVIFDRIRENFYYTPVSKSIDIFNISLSQVLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCEEECCCCCCCEEEECCHHHHHHH
TIITSVTTIMVLLILLIWGGDILHGFAVTLLLGTIIGTVSSIYIASALAFKFGTARNHFI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
KINKK
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]