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The map label for this gene is yajC [H]

Identifier: 71892011

GI number: 71892011

Start: 267721

End: 268068

Strand: Direct

Name: yajC [H]

Synonym: BPEN_237

Alternate gene names: 71892011

Gene position: 267721-268068 (Clockwise)

Preceding gene: 71892010

Following gene: 71892012

Centisome position: 33.82

GC content: 33.62

Gene sequence:

>348_bases
ATGAACATATTTACTAATGCTGCTTGGGCAAGTGTCAATGCTAATTCTCAGGGTAATCCGTATTCCTTAGTGATCATGTT
AACAGTATTTGCTGGAATTTTTTATTTTATGATCTTTAGGCCACAACAAAAACGTAATAAAATTCATAAAGAATTATTAA
GCTCCATCTCTAAAGGAGACGAAATCCTAACTAATGGAGGATTAGTCGGGCGTGTGGTCAAAGTTACAGAAACAGGCTAT
ATCTTTGTTATTCTCAATGACAAAAATGACACTAATGGCAATGAAATATTGATTAAGCGTGACTGTATTACTGCTATTTT
GCCTAAAGGCACTATGAAAGCATTATAA

Upstream 100 bases:

>100_bases
TTTTTATAAGCGTGTTAATCGTATTTAATGTTGAATTTATATTCAGTATTTTTTTAATTAGACCCAATGATTCAAATTAT
TTATAAAACAGGAAATATAC

Downstream 100 bases:

>100_bases
TTTATAATTTCAATATAGATTGAGATAAGATTTTGTGTTAAATAATTACCCGTTATGGAAGTATCTTACGGTTATCTTAG
TATTTGTTACTGGTATAATC

Product: preprotein translocase, auxillary membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNIFTNAAWASVNANSQGNPYSLVIMLTVFAGIFYFMIFRPQQKRNKIHKELLSSISKGDEILTNGGLVGRVVKVTETGY
IFVILNDKNDTNGNEILIKRDCITAILPKGTMKAL

Sequences:

>Translated_115_residues
MNIFTNAAWASVNANSQGNPYSLVIMLTVFAGIFYFMIFRPQQKRNKIHKELLSSISKGDEILTNGGLVGRVVKVTETGY
IFVILNDKNDTNGNEILIKRDCITAILPKGTMKAL
>Mature_115_residues
MNIFTNAAWASVNANSQGNPYSLVIMLTVFAGIFYFMIFRPQQKRNKIHKELLSSISKGDEILTNGGLVGRVVKVTETGY
IFVILNDKNDTNGNEILIKRDCITAILPKGTMKAL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=115, Percent_Identity=60.8695652173913, Blast_Score=145, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12766; Mature: 12766

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFTNAAWASVNANSQGNPYSLVIMLTVFAGIFYFMIFRPQQKRNKIHKELLSSISKGD
CCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
EILTNGGLVGRVVKVTETGYIFVILNDKNDTNGNEILIKRDCITAILPKGTMKAL
EEEECCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCC
>Mature Secondary Structure
MNIFTNAAWASVNANSQGNPYSLVIMLTVFAGIFYFMIFRPQQKRNKIHKELLSSISKGD
CCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
EILTNGGLVGRVVKVTETGYIFVILNDKNDTNGNEILIKRDCITAILPKGTMKAL
EEEECCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]