| Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
|---|---|
| Accession | NC_007292 |
| Length | 791,654 |
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The map label for this gene is tgt
Identifier: 71892010
GI number: 71892010
Start: 266542
End: 267648
Strand: Direct
Name: tgt
Synonym: BPEN_236
Alternate gene names: 71892010
Gene position: 266542-267648 (Clockwise)
Preceding gene: 71892008
Following gene: 71892011
Centisome position: 33.67
GC content: 33.79
Gene sequence:
>1107_bases ATGCCATTTCAACTATTACAAACAGATGGTCACGCACGTCTTGGTAGACTGATTTGTAACCAAGGAATAGTAGATACACC TGCTTTTATGCCAGTAGGGACCTATGGATCCATAAAAACATTAACTGCAAAGGAAGTTGAAGCCAGTGGAACACAAATTA TTTTAAGTAATACTTTTCATTTATGGTTACGTCCTGGTTTAGACATTATAAAACTACACGGCAGCTTACATAAATTCATG AGTTGGAATGGCCCTATAATTACAGATTCTGGAGGATTCCAAGTATTTAGTCTAAGTAAAACTCGTACAATCACAAGAAA AGGAGTAGGCTTTAAAAGCCCTATTGACGGTCATCTTGTGTTTTTAACTCCAGAAAAATCCATAGAAATTCAGCATGATT TGCAATCCGATATAGTTATGATATTTGATGAATGCATATCTTACCCCAACACTTGGGATTATGTAAAAAAATCAGTAAAC ATATCTTTAAATTGGGCTGAACGCAGCCGTTTACGTTTCGATACATTACATAATTCAAATATGTTATTTGCTATTATTCA AGGAGGTATGTATGAAAATTTAAGGGATATGTCAGCAAAAGAATTAATAAATATTGGTTTTGATGGATACGCAATAGGAG GTTTATCAGTAGGTGAGCCGAAAAAAGAAATGTATCGTATTTTATCTCATATATGCAAATTAATTCCTACAAATAAACCA CGCTATTTAATGGGTGCTGGGAAACCAGAGGATTTGCTGGAGGCTGTACAGAAAGGTATTGATATGTTTGATTGCGTTAT ACCAACGCGTAACGCTCGTAATGGATATTTGTTTGTTTCTGATGGAACAATTAAAATTCGTAATGCGCAATACAAAAAGG ACACTTCTCCGTTAGATGGAAACTGCGATTGTTATACTTGTCAACATTACAGTCGTTCGTATTTGCATCATTTAGATTGT TGCAAAGAAATTCTTGGTGTGCGTTTAAATACCATTCATAATTTAAGATATTACCAGCGTTTAATGGAGGAATTACGTCA AGCTATAAAAACAAAATCATTGCAAAACTTTATCGATATTTTTTATAAGCGTGTTAATCGTATTTAA
Upstream 100 bases:
>100_bases ATATATAAATACAGATTATTATAATAAATACAGTTTATAATTAGTACTTACTATATTTATATAGTAATTAATAAACATTT CTTTAATTAGGATAACATTT
Downstream 100 bases:
>100_bases TGTTGAATTTATATTCAGTATTTTTTTAATTAGACCCAATGATTCAAATTATTTATAAAACAGGAAATATACATGAACAT ATTTACTAATGCTGCTTGGG
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MPFQLLQTDGHARLGRLICNQGIVDTPAFMPVGTYGSIKTLTAKEVEASGTQIILSNTFHLWLRPGLDIIKLHGSLHKFM SWNGPIITDSGGFQVFSLSKTRTITRKGVGFKSPIDGHLVFLTPEKSIEIQHDLQSDIVMIFDECISYPNTWDYVKKSVN ISLNWAERSRLRFDTLHNSNMLFAIIQGGMYENLRDMSAKELINIGFDGYAIGGLSVGEPKKEMYRILSHICKLIPTNKP RYLMGAGKPEDLLEAVQKGIDMFDCVIPTRNARNGYLFVSDGTIKIRNAQYKKDTSPLDGNCDCYTCQHYSRSYLHHLDC CKEILGVRLNTIHNLRYYQRLMEELRQAIKTKSLQNFIDIFYKRVNRI
Sequences:
>Translated_368_residues MPFQLLQTDGHARLGRLICNQGIVDTPAFMPVGTYGSIKTLTAKEVEASGTQIILSNTFHLWLRPGLDIIKLHGSLHKFM SWNGPIITDSGGFQVFSLSKTRTITRKGVGFKSPIDGHLVFLTPEKSIEIQHDLQSDIVMIFDECISYPNTWDYVKKSVN ISLNWAERSRLRFDTLHNSNMLFAIIQGGMYENLRDMSAKELINIGFDGYAIGGLSVGEPKKEMYRILSHICKLIPTNKP RYLMGAGKPEDLLEAVQKGIDMFDCVIPTRNARNGYLFVSDGTIKIRNAQYKKDTSPLDGNCDCYTCQHYSRSYLHHLDC CKEILGVRLNTIHNLRYYQRLMEELRQAIKTKSLQNFIDIFYKRVNRI >Mature_367_residues PFQLLQTDGHARLGRLICNQGIVDTPAFMPVGTYGSIKTLTAKEVEASGTQIILSNTFHLWLRPGLDIIKLHGSLHKFMS WNGPIITDSGGFQVFSLSKTRTITRKGVGFKSPIDGHLVFLTPEKSIEIQHDLQSDIVMIFDECISYPNTWDYVKKSVNI SLNWAERSRLRFDTLHNSNMLFAIIQGGMYENLRDMSAKELINIGFDGYAIGGLSVGEPKKEMYRILSHICKLIPTNKPR YLMGAGKPEDLLEAVQKGIDMFDCVIPTRNARNGYLFVSDGTIKIRNAQYKKDTSPLDGNCDCYTCQHYSRSYLHHLDCC KEILGVRLNTIHNLRYYQRLMEELRQAIKTKSLQNFIDIFYKRVNRI
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family
Homologues:
Organism=Homo sapiens, GI13654276, Length=350, Percent_Identity=41.7142857142857, Blast_Score=285, Evalue=4e-77, Organism=Escherichia coli, GI1786607, Length=367, Percent_Identity=67.574931880109, Blast_Score=549, Evalue=1e-157, Organism=Caenorhabditis elegans, GI17544680, Length=362, Percent_Identity=41.9889502762431, Blast_Score=294, Evalue=5e-80, Organism=Caenorhabditis elegans, GI25146502, Length=138, Percent_Identity=31.8840579710145, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19920510, Length=353, Percent_Identity=41.3597733711048, Blast_Score=289, Evalue=2e-78, Organism=Drosophila melanogaster, GI21355311, Length=260, Percent_Identity=27.3076923076923, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TGT_BLOPB (Q493H3)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277740.1 - HSSP: P28720 - ProteinModelPortal: Q493H3 - SMR: Q493H3 - STRING: Q493H3 - GeneID: 3562770 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_236 - eggNOG: COG0343 - HOGENOM: HBG629929 - OMA: FMPVGTV - ProtClustDB: PRK00112 - BioCyc: CBLO291272:BPEN_236-MONOMER - HAMAP: MF_00168 - InterPro: IPR004803 - InterPro: IPR002616 - Gene3D: G3DSA:3.20.20.105 - PANTHER: PTHR11962 - TIGRFAMs: TIGR00430 - TIGRFAMs: TIGR00449
Pfam domain/function: PF01702 TGT; SSF51713 tRNA_ribo_trans
EC number: =2.4.2.29
Molecular weight: Translated: 41983; Mature: 41852
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: ACT_SITE 89-89 BINDING 90-90
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFQLLQTDGHARLGRLICNQGIVDTPAFMPVGTYGSIKTLTAKEVEASGTQIILSNTFH CCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEECCEE LWLRPGLDIIKLHGSLHKFMSWNGPIITDSGGFQVFSLSKTRTITRKGVGFKSPIDGHLV EEECCCCEEEEHHHHHHHHHCCCCCEEECCCCEEEEEECCHHHHHHCCCCCCCCCCCEEE FLTPEKSIEIQHDLQSDIVMIFDECISYPNTWDYVKKSVNISLNWAERSRLRFDTLHNSN EECCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCCCEEEEEECCCC MLFAIIQGGMYENLRDMSAKELINIGFDGYAIGGLSVGEPKKEMYRILSHICKLIPTNKP EEEEEECCCHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC RYLMGAGKPEDLLEAVQKGIDMFDCVIPTRNARNGYLFVSDGTIKIRNAQYKKDTSPLDG CEEEECCCHHHHHHHHHHCCCEEEHCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCC NCDCYTCQHYSRSYLHHLDCCKEILGVRLNTIHNLRYYQRLMEELRQAIKTKSLQNFIDI CCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYKRVNRI HHHHHHCC >Mature Secondary Structure PFQLLQTDGHARLGRLICNQGIVDTPAFMPVGTYGSIKTLTAKEVEASGTQIILSNTFH CCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEECCEE LWLRPGLDIIKLHGSLHKFMSWNGPIITDSGGFQVFSLSKTRTITRKGVGFKSPIDGHLV EEECCCCEEEEHHHHHHHHHCCCCCEEECCCCEEEEEECCHHHHHHCCCCCCCCCCCEEE FLTPEKSIEIQHDLQSDIVMIFDECISYPNTWDYVKKSVNISLNWAERSRLRFDTLHNSN EECCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCCCEEEEEECCCC MLFAIIQGGMYENLRDMSAKELINIGFDGYAIGGLSVGEPKKEMYRILSHICKLIPTNKP EEEEEECCCHHHHHHHCCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC RYLMGAGKPEDLLEAVQKGIDMFDCVIPTRNARNGYLFVSDGTIKIRNAQYKKDTSPLDG CEEEECCCHHHHHHHHHHCCCEEEHCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCC NCDCYTCQHYSRSYLHHLDCCKEILGVRLNTIHNLRYYQRLMEELRQAIKTKSLQNFIDI CCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYKRVNRI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA