| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is pmmB [C]
Identifier: 68536765
GI number: 68536765
Start: 1953675
End: 1955210
Strand: Direct
Name: pmmB [C]
Synonym: jk1675
Alternate gene names: 68536765
Gene position: 1953675-1955210 (Clockwise)
Preceding gene: 68536764
Following gene: 68536767
Centisome position: 79.34
GC content: 66.93
Gene sequence:
>1536_bases ATGAGCCAGCTGAAGTTCGGCACCGCCGGCCTGCGCGCCAAGATCGGCCCCGGACCAGAGGAAATGAACGTCGGCACCGT CACCCGCGCCACGGCTGGTGTGGCTGCGTGGCTTAAGGAACGGAAGCGCCCCTTGCGCGCCGACGGGGTTTTTCGCGCTG CGGTGGGATATGACGCCCGCTACGCCTCCCACGCCCTAGCCCGCGCTACGGCGGAAACATTCGCCGGTGCAGGCTTCGAC GTGACCCTCATCGCTGAACCCGCCCCCACCCCAGTGCTGGCGTGGCTGGTACGCTCCCGGCGAATGGATGTGGGCGTGCA AATCACCGCCTCGCACAACCCCGCGCAGGACAACGGCTACAAGCTGTACCTGGACGGCGGCTCTCAGCTGGTCTCCCCCG CCGACCGGCAGATCGAAGAGCACATTGCCGCCCAGCCAACCGACGCGGCGGAGATTCCGCGCTCTGAGGCGAAGTCGGTA GACCTGTCCGTAGTCTCCGGCTATGTCACCGAGCTAAGTACCCTGGTGGCCACCGGCCGCCAATCCGAGCTGGCGCCACG GCGAAAGCTGAAGATCCTCTACACCCCCATGCACGGCGTGGGTGGCAACGCACTGGAGTGGGCACTTCGTGAGAACGGCT TCGGCAACGTGCACGCGGTGGCCTCGCAGCGCTGGCCGGATCCAACCTTCCCGACGGTGGACTTCCCAAACCCGGAGGAG CCCGGCGCCACCGACGCGCTATTGGAAGAAGCCCGCGCCATCGACGCAGACCTGCTGATCGCTCTTGATCCGGATGCGGA CCGCTGCATGCTGGGGCTCAAGCGCGCGGATGGCGAGTACCACATGCTGCGCGGGGACGAGACCGGCCCCTTGCTGGCGC GCCGGGTGCTGGCGGACGTGGGGGCGTCCATAAAGAAAAAACCTGTGGTGGCGACAACGGTGGTCAGTTCGCAGCTGCTG GGGCGCATGGCGCGCGCCGAGGGCTGGGATTACGTGGAGACGCTGACTGGTTTTAAGAACCTGGCGCGCGCTGCCGACAA TCGGCCGGGCGAGCTGACCTTCGCCTACGAGGAGGCGATCGGCACCGCGCCTGCGCCACACATCGTGGCGGATAAGGATG GCATTGCGACGGCACTGATCGCGGCGGCGTGGGCAGCCGAGGCAGACCTGGTCGCCGAGTTGGACGACATTGAGGCCACC TATGGAGTATTCAGAACCTCACAGGTGAGCGCCCGTTTCGACAGTGCCGAGCAAGCCCAAGAGTTGATCGCTCGCTGGAC GGATAATCCGCCGGCTGAGCTCGCAGGTGCGGCCATGCAGGCCGGGCCGATCGAGGATTCCGCTGGCAACCGCACCGACG GCGTGCGACTGGTGGGCACTTCCGCGAATATGGGGCTGCGCGTAGTGGCCCGCGCGTCCGGCACCGAGCCGAAGGCGAAG TTCTACCTGGAGGTCAGCGCGGAGCCAGGGACGGACCCACAGGCCGTGGGGGCGCTGCTAGAGCGGCTACAGGTCGATGT TTCGGGGGCCGTATAG
Upstream 100 bases:
>100_bases GAGTTACCGGCGAACCCCTGAACCACGAGGAAGTCCTGCAGGCGGGCAAGGAAGCTGCCAACGACATGGGCAAGTTGCTC GGCGAGCTGGTGAACAACCT
Downstream 100 bases:
>100_bases GCGGTCACCGGCATCGCCCAGGCCGGGCACGATGTACGCCTCCTTGTTCAGGCTCGGGTCAATAGTGGCGGTGTACAGCC GGCGCACCCCCACGTTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSQLKFGTAGLRAKIGPGPEEMNVGTVTRATAGVAAWLKERKRPLRADGVFRAAVGYDARYASHALARATAETFAGAGFD VTLIAEPAPTPVLAWLVRSRRMDVGVQITASHNPAQDNGYKLYLDGGSQLVSPADRQIEEHIAAQPTDAAEIPRSEAKSV DLSVVSGYVTELSTLVATGRQSELAPRRKLKILYTPMHGVGGNALEWALRENGFGNVHAVASQRWPDPTFPTVDFPNPEE PGATDALLEEARAIDADLLIALDPDADRCMLGLKRADGEYHMLRGDETGPLLARRVLADVGASIKKKPVVATTVVSSQLL GRMARAEGWDYVETLTGFKNLARAADNRPGELTFAYEEAIGTAPAPHIVADKDGIATALIAAAWAAEADLVAELDDIEAT YGVFRTSQVSARFDSAEQAQELIARWTDNPPAELAGAAMQAGPIEDSAGNRTDGVRLVGTSANMGLRVVARASGTEPKAK FYLEVSAEPGTDPQAVGALLERLQVDVSGAV
Sequences:
>Translated_511_residues MSQLKFGTAGLRAKIGPGPEEMNVGTVTRATAGVAAWLKERKRPLRADGVFRAAVGYDARYASHALARATAETFAGAGFD VTLIAEPAPTPVLAWLVRSRRMDVGVQITASHNPAQDNGYKLYLDGGSQLVSPADRQIEEHIAAQPTDAAEIPRSEAKSV DLSVVSGYVTELSTLVATGRQSELAPRRKLKILYTPMHGVGGNALEWALRENGFGNVHAVASQRWPDPTFPTVDFPNPEE PGATDALLEEARAIDADLLIALDPDADRCMLGLKRADGEYHMLRGDETGPLLARRVLADVGASIKKKPVVATTVVSSQLL GRMARAEGWDYVETLTGFKNLARAADNRPGELTFAYEEAIGTAPAPHIVADKDGIATALIAAAWAAEADLVAELDDIEAT YGVFRTSQVSARFDSAEQAQELIARWTDNPPAELAGAAMQAGPIEDSAGNRTDGVRLVGTSANMGLRVVARASGTEPKAK FYLEVSAEPGTDPQAVGALLERLQVDVSGAV >Mature_510_residues SQLKFGTAGLRAKIGPGPEEMNVGTVTRATAGVAAWLKERKRPLRADGVFRAAVGYDARYASHALARATAETFAGAGFDV TLIAEPAPTPVLAWLVRSRRMDVGVQITASHNPAQDNGYKLYLDGGSQLVSPADRQIEEHIAAQPTDAAEIPRSEAKSVD LSVVSGYVTELSTLVATGRQSELAPRRKLKILYTPMHGVGGNALEWALRENGFGNVHAVASQRWPDPTFPTVDFPNPEEP GATDALLEEARAIDADLLIALDPDADRCMLGLKRADGEYHMLRGDETGPLLARRVLADVGASIKKKPVVATTVVSSQLLG RMARAEGWDYVETLTGFKNLARAADNRPGELTFAYEEAIGTAPAPHIVADKDGIATALIAAAWAAEADLVAELDDIEATY GVFRTSQVSARFDSAEQAQELIARWTDNPPAELAGAAMQAGPIEDSAGNRTDGVRLVGTSANMGLRVVARASGTEPKAKF YLEVSAEPGTDPQAVGALLERLQVDVSGAV
Specific function: Unknown
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=553, Percent_Identity=31.6455696202532, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI31377548, Length=550, Percent_Identity=29.2727272727273, Blast_Score=193, Evalue=3e-49, Organism=Escherichia coli, GI1789566, Length=302, Percent_Identity=29.1390728476821, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788361, Length=490, Percent_Identity=25.7142857142857, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71993870, Length=551, Percent_Identity=32.486388384755, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71993878, Length=286, Percent_Identity=35.3146853146853, Blast_Score=141, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6323934, Length=552, Percent_Identity=31.3405797101449, Blast_Score=221, Evalue=2e-58, Organism=Drosophila melanogaster, GI20129809, Length=541, Percent_Identity=32.902033271719, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24651977, Length=457, Percent_Identity=34.3544857768052, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24653722, Length=423, Percent_Identity=28.8416075650118, Blast_Score=162, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 54223; Mature: 54091
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLKFGTAGLRAKIGPGPEEMNVGTVTRATAGVAAWLKERKRPLRADGVFRAAVGYDAR CCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCHH YASHALARATAETFAGAGFDVTLIAEPAPTPVLAWLVRSRRMDVGVQITASHNPAQDNGY HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCE KLYLDGGSQLVSPADRQIEEHIAAQPTDAAEIPRSEAKSVDLSVVSGYVTELSTLVATGR EEEECCCCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCC QSELAPRRKLKILYTPMHGVGGNALEWALRENGFGNVHAVASQRWPDPTFPTVDFPNPEE CHHCCCCCCEEEEEECCCCCCCCCEEHHHHCCCCCCEEEEHHCCCCCCCCCCCCCCCCCC PGATDALLEEARAIDADLLIALDPDADRCMLGLKRADGEYHMLRGDETGPLLARRVLADV CCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH GASIKKKPVVATTVVSSQLLGRMARAEGWDYVETLTGFKNLARAADNRPGELTFAYEEAI CCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHC GTAPAPHIVADKDGIATALIAAAWAAEADLVAELDDIEATYGVFRTSQVSARFDSAEQAQ CCCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH ELIARWTDNPPAELAGAAMQAGPIEDSAGNRTDGVRLVGTSANMGLRVVARASGTEPKAK HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEE FYLEVSAEPGTDPQAVGALLERLQVDVSGAV EEEEEECCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQLKFGTAGLRAKIGPGPEEMNVGTVTRATAGVAAWLKERKRPLRADGVFRAAVGYDAR CCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCHH YASHALARATAETFAGAGFDVTLIAEPAPTPVLAWLVRSRRMDVGVQITASHNPAQDNGY HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCE KLYLDGGSQLVSPADRQIEEHIAAQPTDAAEIPRSEAKSVDLSVVSGYVTELSTLVATGR EEEECCCCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCC QSELAPRRKLKILYTPMHGVGGNALEWALRENGFGNVHAVASQRWPDPTFPTVDFPNPEE CHHCCCCCCEEEEEECCCCCCCCCEEHHHHCCCCCCEEEEHHCCCCCCCCCCCCCCCCCC PGATDALLEEARAIDADLLIALDPDADRCMLGLKRADGEYHMLRGDETGPLLARRVLADV CCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH GASIKKKPVVATTVVSSQLLGRMARAEGWDYVETLTGFKNLARAADNRPGELTFAYEEAI CCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHC GTAPAPHIVADKDGIATALIAAAWAAEADLVAELDDIEATYGVFRTSQVSARFDSAEQAQ CCCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH ELIARWTDNPPAELAGAAMQAGPIEDSAGNRTDGVRLVGTSANMGLRVVARASGTEPKAK HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEE FYLEVSAEPGTDPQAVGALLERLQVDVSGAV EEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]