| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is deoD [H]
Identifier: 68536764
GI number: 68536764
Start: 1952866
End: 1953678
Strand: Direct
Name: deoD [H]
Synonym: jk1674
Alternate gene names: 68536764
Gene position: 1952866-1953678 (Clockwise)
Preceding gene: 68536762
Following gene: 68536765
Centisome position: 79.3
GC content: 65.68
Gene sequence:
>813_bases ATGACTGCTTCCCCAAATCCATATGAATTGGCCGAAGAGGCTGCGGCGGCGTTGAAGAAGCGCACGGGCCTCGATTCCTA CGACTGCGCCGTGGTGCTCGGCTCGGGGTGGCGCCCTGCCGCCGACGTGCTGTGCGAAGGCGCGGAAGATCTGCAGGAGT TCCCGATGTCGGAGCTGCCGGGCTTTTTGGCTCCCACCGCGCAGGGGCACGGCGGCACGGTCCGCAGTGCGCGCATCGGC GACCGCAACGTGCTGGTGCTGTTGGGCCGCACCCACGCCTACGAGGGCCACGAGCTATGGCGCACAGCCCATGCAGTCCG CACCGCCGCTGCCGCGGGAGTGCAGACGATCGTGCTAACCAACGCCGCGGGTGGCCTGACCGAAGGCATGAAGGTGGGCG AGCCGGTGTTGATTGCGGATCACATTAACTTCACCGCCAAGACGCCTCTGACGGGCGCGAACTTCGTGAACCTGGTGGAT GCCTACAGCCCCGAACTACGCGCCAAGGTGCAGAAGCTGCGCCCAGGTATGCGCGAGGCCGTGTACGCGATGATGCCCGG CCCACAGTACGAAACCCCGGCGGAGATCCACATGCTGCGCACCCTGGGCGCGGGCCTGGTGGGCATGTCCACGGTCTACG AGACCATCGCCGCGCGCGAGGCGGATGTGGATGTACTGGGAATCTCGCTGGTCACGAACCTGGCGGCAGGAGTTACCGGC GAACCCCTGAACCACGAGGAAGTCCTGCAGGCGGGCAAGGAAGCTGCCAACGACATGGGCAAGTTGCTCGGCGAGCTGGT GAACAACCTATGA
Upstream 100 bases:
>100_bases CCTGCGCGCGTTCCTGGGTGCCGTCTTGCACTTGAATACTCACGTCCCTCTCACTCTTACTGACCTTTTCAGTCTAGCGC CTGCGGTATTCTTGGTTGGC
Downstream 100 bases:
>100_bases GCCAGCTGAAGTTCGGCACCGCCGGCCTGCGCGCCAAGATCGGCCCCGGACCAGAGGAAATGAACGTCGGCACCGTCACC CGCGCCACGGCTGGTGTGGC
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: PNP; Inosine phosphorylase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTASPNPYELAEEAAAALKKRTGLDSYDCAVVLGSGWRPAADVLCEGAEDLQEFPMSELPGFLAPTAQGHGGTVRSARIG DRNVLVLLGRTHAYEGHELWRTAHAVRTAAAAGVQTIVLTNAAGGLTEGMKVGEPVLIADHINFTAKTPLTGANFVNLVD AYSPELRAKVQKLRPGMREAVYAMMPGPQYETPAEIHMLRTLGAGLVGMSTVYETIAAREADVDVLGISLVTNLAAGVTG EPLNHEEVLQAGKEAANDMGKLLGELVNNL
Sequences:
>Translated_270_residues MTASPNPYELAEEAAAALKKRTGLDSYDCAVVLGSGWRPAADVLCEGAEDLQEFPMSELPGFLAPTAQGHGGTVRSARIG DRNVLVLLGRTHAYEGHELWRTAHAVRTAAAAGVQTIVLTNAAGGLTEGMKVGEPVLIADHINFTAKTPLTGANFVNLVD AYSPELRAKVQKLRPGMREAVYAMMPGPQYETPAEIHMLRTLGAGLVGMSTVYETIAAREADVDVLGISLVTNLAAGVTG EPLNHEEVLQAGKEAANDMGKLLGELVNNL >Mature_269_residues TASPNPYELAEEAAAALKKRTGLDSYDCAVVLGSGWRPAADVLCEGAEDLQEFPMSELPGFLAPTAQGHGGTVRSARIGD RNVLVLLGRTHAYEGHELWRTAHAVRTAAAAGVQTIVLTNAAGGLTEGMKVGEPVLIADHINFTAKTPLTGANFVNLVDA YSPELRAKVQKLRPGMREAVYAMMPGPQYETPAEIHMLRTLGAGLVGMSTVYETIAAREADVDVLGISLVTNLAAGVTGE PLNHEEVLQAGKEAANDMGKLLGELVNNL
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=259, Percent_Identity=37.8378378378378, Blast_Score=154, Evalue=1e-37, Organism=Escherichia coli, GI1788746, Length=245, Percent_Identity=34.6938775510204, Blast_Score=138, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17541190, Length=287, Percent_Identity=32.404181184669, Blast_Score=150, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6323238, Length=283, Percent_Identity=32.5088339222615, Blast_Score=130, Evalue=2e-31, Organism=Drosophila melanogaster, GI45552887, Length=284, Percent_Identity=32.7464788732394, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI45552885, Length=284, Percent_Identity=32.7464788732394, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24656090, Length=284, Percent_Identity=32.7464788732394, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI24656093, Length=284, Percent_Identity=32.7464788732394, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI24762376, Length=227, Percent_Identity=29.5154185022026, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011269 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 28467; Mature: 28336
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS01240 PNP_MTAP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASPNPYELAEEAAAALKKRTGLDSYDCAVVLGSGWRPAADVLCEGAEDLQEFPMSELP CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHCCHHHCC GFLAPTAQGHGGTVRSARIGDRNVLVLLGRTHAYEGHELWRTAHAVRTAAAAGVQTIVLT CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE NAAGGLTEGMKVGEPVLIADHINFTAKTPLTGANFVNLVDAYSPELRAKVQKLRPGMREA CCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHH VYAMMPGPQYETPAEIHMLRTLGAGLVGMSTVYETIAAREADVDVLGISLVTNLAAGVTG HHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC EPLNHEEVLQAGKEAANDMGKLLGELVNNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TASPNPYELAEEAAAALKKRTGLDSYDCAVVLGSGWRPAADVLCEGAEDLQEFPMSELP CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHCCHHHCC GFLAPTAQGHGGTVRSARIGDRNVLVLLGRTHAYEGHELWRTAHAVRTAAAAGVQTIVLT CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE NAAGGLTEGMKVGEPVLIADHINFTAKTPLTGANFVNLVDAYSPELRAKVQKLRPGMREA CCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHH VYAMMPGPQYETPAEIHMLRTLGAGLVGMSTVYETIAAREADVDVLGISLVTNLAAGVTG HHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC EPLNHEEVLQAGKEAANDMGKLLGELVNNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]