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The map label for this gene is glgB

Identifier: 68536415

GI number: 68536415

Start: 1575052

End: 1577187

Strand: Direct

Name: glgB

Synonym: jk1330

Alternate gene names: 68536415

Gene position: 1575052-1577187 (Clockwise)

Preceding gene: 68536414

Following gene: 68536433

Centisome position: 63.96

GC content: 64.61

Gene sequence:

>2136_bases
ATGAACCACGATTACCACCGGCTCGCAGAACGTAGGCACCACGCCCCGCACGACGTGCTTGGGGCACACGAGAACGGCGA
CGGAACCACCACCATCCGCACTGTCCAGTGCGGGGCAGAATCCGTAGCTGTGCGCATCAACGGTGGCGAGCCGGTGCAGA
TGGTGCCGGCAGAGGAATACCCGGCGCTGTTCACCGCAACTGTGGATTATTTCGTGGACACCTACAATTTCGAGGTCACC
TGGGCCGGCGGCACCGCCGCCACCCTGGAAGACCCCTACCGGCGCCTGCCTACCGTCGGTGACCTGGACCGCTACCTCAT
CGGCGAGGGCCGGCACGAGGAGCTGTGGAAGGTCCTCGGCGCGCACGTCGTGGATGGTGGAGTGGCCTTTTCCGTGTGGG
CACCGCATGCCGCAGGCGTTTCCGTGATCGGCGACTTCAACGGCTGGAATGCTAACCAGCACCCCTTGCGCGCGCTGGGT
AGCAGCGGCATCTGGGAGCTGTGGATCCCGAGTGTGAGTGCCGGGGCGCATTACAAGTTCTCCATCACCACCGGTGATGG
CGTACGCCTGGACAAAGCCGACCCGATGGCACGCCTGGCCGAGCCCGCCCCCGCGACTGCCTCCATCGTCGTAGCGGACA
GCGACTATGCCTGGGGTGACGACGAGTGGCTGGCCCACCGCGCTGCTGTGGGGGTGGACGAGACCATGAGCATCTACGAA
ATGCACCTAGGCAGCTGGCGCAAGGGGCGCAGCTACCGGGAGCTGGCCGTGGAGCTGGTGGAATATGTGCAGGAGCTGGG
CTACACCCACGTGGAGCTGATGGGTGTGTCCGAGCACCCATTCGAGCCTTCCTGGGGGTACCAGGTGACCAGCTACTACG
CACCGAACAACCGCTACGGTGGCCCGGATGACCTGCGCTACTTGATCGATTCGCTGCACCGCGCCGGCATCGGCGTGATT
ATGGACTGGGTTCCCGGCCACTTCCCCAAGGACGGCTGGGCCCTGGGCCGCTTCGACGGCGAGGCCTGCTACGAACACCC
GGATCCGCGCCGCGGCGAGCAGCCGGACTGGGGCACCTATGTGTTCGACTTCGGCCGCAACGAGGTGCGCAACTTCCTGG
TGGCCAACGCTTTGTACTGGTGCAAGGAGTTCCACATCGACGGTCTGCGCGTGGATGCCGTGGCCTCGATGCTGTACCTG
GACTACTCCCGTGACGACTGGCTGCCCAACCAATACGGCGGGCGCGAGAACCTGGATGCGGTGGAATTCCTCAAAGAAAT
GAACGCCACCGTGCACCGCGAATGCCCGGGTTCGCTGACTATTGCCGAAGAGTCGACCTCCTGGCCGGGAGTGACCGCCC
CCACCAGCGAAGGCGGCCTGGGGTTCAGCCTGAAGTGGAACATGGGCTGGATGCACGACAGCCTGGAGTACATCCAGCGA
GATCCTGCCTACCGCAGCTACCACCACAACGAGATCACTTTCTCGATGGTCTACGCCTACTCCGAGAACTACGTCCTTCC
AATCAGCCACGACGAGGTAGTGCACGGCAAGGGCACCCTGTGGTCGCGCATGCCCGCCGGTTCCGCCTGGGACAAGGCTG
CGATGGTGCGCAGCTACCTGGCGTTCATGTGGGCGCACCCGGGCAAGAAGTTGCTCTTCCAGGGCCAGGAATGGGGCCAG
ACCGAGGAGTGGAATGAGTCCCGCGGTCTGGATTGGCACGACCTCGAAGGCTGGGAGGGCGAGTTCCACCGCGGCATCAG
CGCCCTGACCAGCCAGCTGAACAAGCTCTACCACTCCGAGCTCGCTCTGGGGCAGGATCACGCGCCGGAGGGCTTCCAGT
GGATCGCCAGCGACGACTCGACGAATAACGTTCTTTCCTTTATTCGACGCCACCGTGGGCGCGAGCTGGCGTGTGTTATT
AACTTCTCGGGCACCACCCAAGAGAACTACCGCATCGGCCTGCCGCAGGCCGGCACGTGGCGCGAGGTGTTGAACACCGA
CGACGTGCAGTACGAGGGCGCCGGGCGCGTGAACGGCGACCTGCACACGGAGCCCACCGGCTCCCACGGTATGGAGGCCT
CCGCCGTGCTGCAGATCCCGGCGCACACCGCGCGCTGGTTCGTACTGGAGAGTTAA

Upstream 100 bases:

>100_bases
CGCACATCTTCCGGCTGCCCACCCTCGGTGAGGGTGAGCGCGAGCGGGTCTGCATGCGAGCTCAGGAAGAATACGATCCC
CGCAGGTAGAATCGGCGGGT

Downstream 100 bases:

>100_bases
GCCCGGCTAGAACAGCGCCGAGGCCATGCGGGTGCGGCCCGCGATGACCTCCGGGTCCGCCGGGTCGAACAGGCTGAACA
GCTCCAGCAGGCGAGCCTTC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE

Number of amino acids: Translated: 711; Mature: 711

Protein sequence:

>711_residues
MNHDYHRLAERRHHAPHDVLGAHENGDGTTTIRTVQCGAESVAVRINGGEPVQMVPAEEYPALFTATVDYFVDTYNFEVT
WAGGTAATLEDPYRRLPTVGDLDRYLIGEGRHEELWKVLGAHVVDGGVAFSVWAPHAAGVSVIGDFNGWNANQHPLRALG
SSGIWELWIPSVSAGAHYKFSITTGDGVRLDKADPMARLAEPAPATASIVVADSDYAWGDDEWLAHRAAVGVDETMSIYE
MHLGSWRKGRSYRELAVELVEYVQELGYTHVELMGVSEHPFEPSWGYQVTSYYAPNNRYGGPDDLRYLIDSLHRAGIGVI
MDWVPGHFPKDGWALGRFDGEACYEHPDPRRGEQPDWGTYVFDFGRNEVRNFLVANALYWCKEFHIDGLRVDAVASMLYL
DYSRDDWLPNQYGGRENLDAVEFLKEMNATVHRECPGSLTIAEESTSWPGVTAPTSEGGLGFSLKWNMGWMHDSLEYIQR
DPAYRSYHHNEITFSMVYAYSENYVLPISHDEVVHGKGTLWSRMPAGSAWDKAAMVRSYLAFMWAHPGKKLLFQGQEWGQ
TEEWNESRGLDWHDLEGWEGEFHRGISALTSQLNKLYHSELALGQDHAPEGFQWIASDDSTNNVLSFIRRHRGRELACVI
NFSGTTQENYRIGLPQAGTWREVLNTDDVQYEGAGRVNGDLHTEPTGSHGMEASAVLQIPAHTARWFVLES

Sequences:

>Translated_711_residues
MNHDYHRLAERRHHAPHDVLGAHENGDGTTTIRTVQCGAESVAVRINGGEPVQMVPAEEYPALFTATVDYFVDTYNFEVT
WAGGTAATLEDPYRRLPTVGDLDRYLIGEGRHEELWKVLGAHVVDGGVAFSVWAPHAAGVSVIGDFNGWNANQHPLRALG
SSGIWELWIPSVSAGAHYKFSITTGDGVRLDKADPMARLAEPAPATASIVVADSDYAWGDDEWLAHRAAVGVDETMSIYE
MHLGSWRKGRSYRELAVELVEYVQELGYTHVELMGVSEHPFEPSWGYQVTSYYAPNNRYGGPDDLRYLIDSLHRAGIGVI
MDWVPGHFPKDGWALGRFDGEACYEHPDPRRGEQPDWGTYVFDFGRNEVRNFLVANALYWCKEFHIDGLRVDAVASMLYL
DYSRDDWLPNQYGGRENLDAVEFLKEMNATVHRECPGSLTIAEESTSWPGVTAPTSEGGLGFSLKWNMGWMHDSLEYIQR
DPAYRSYHHNEITFSMVYAYSENYVLPISHDEVVHGKGTLWSRMPAGSAWDKAAMVRSYLAFMWAHPGKKLLFQGQEWGQ
TEEWNESRGLDWHDLEGWEGEFHRGISALTSQLNKLYHSELALGQDHAPEGFQWIASDDSTNNVLSFIRRHRGRELACVI
NFSGTTQENYRIGLPQAGTWREVLNTDDVQYEGAGRVNGDLHTEPTGSHGMEASAVLQIPAHTARWFVLES
>Mature_711_residues
MNHDYHRLAERRHHAPHDVLGAHENGDGTTTIRTVQCGAESVAVRINGGEPVQMVPAEEYPALFTATVDYFVDTYNFEVT
WAGGTAATLEDPYRRLPTVGDLDRYLIGEGRHEELWKVLGAHVVDGGVAFSVWAPHAAGVSVIGDFNGWNANQHPLRALG
SSGIWELWIPSVSAGAHYKFSITTGDGVRLDKADPMARLAEPAPATASIVVADSDYAWGDDEWLAHRAAVGVDETMSIYE
MHLGSWRKGRSYRELAVELVEYVQELGYTHVELMGVSEHPFEPSWGYQVTSYYAPNNRYGGPDDLRYLIDSLHRAGIGVI
MDWVPGHFPKDGWALGRFDGEACYEHPDPRRGEQPDWGTYVFDFGRNEVRNFLVANALYWCKEFHIDGLRVDAVASMLYL
DYSRDDWLPNQYGGRENLDAVEFLKEMNATVHRECPGSLTIAEESTSWPGVTAPTSEGGLGFSLKWNMGWMHDSLEYIQR
DPAYRSYHHNEITFSMVYAYSENYVLPISHDEVVHGKGTLWSRMPAGSAWDKAAMVRSYLAFMWAHPGKKLLFQGQEWGQ
TEEWNESRGLDWHDLEGWEGEFHRGISALTSQLNKLYHSELALGQDHAPEGFQWIASDDSTNNVLSFIRRHRGRELACVI
NFSGTTQENYRIGLPQAGTWREVLNTDDVQYEGAGRVNGDLHTEPTGSHGMEASAVLQIPAHTARWFVLES

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family

Homologues:

Organism=Homo sapiens, GI189458812, Length=652, Percent_Identity=28.0674846625767, Blast_Score=213, Evalue=6e-55,
Organism=Escherichia coli, GI1789839, Length=715, Percent_Identity=45.034965034965, Blast_Score=619, Evalue=1e-178,
Organism=Caenorhabditis elegans, GI17554896, Length=663, Percent_Identity=26.6968325791855, Blast_Score=187, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI32564391, Length=511, Percent_Identity=27.7886497064579, Blast_Score=166, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6320826, Length=615, Percent_Identity=26.0162601626016, Blast_Score=171, Evalue=5e-43,
Organism=Drosophila melanogaster, GI28573410, Length=646, Percent_Identity=28.1733746130031, Blast_Score=191, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGB_CORJK (Q4JUK5)

Other databases:

- EMBL:   CR931997
- RefSeq:   YP_251120.1
- HSSP:   P07762
- ProteinModelPortal:   Q4JUK5
- SMR:   Q4JUK5
- STRING:   Q4JUK5
- GeneID:   3433834
- GenomeReviews:   CR931997_GR
- KEGG:   cjk:jk1330
- NMPDR:   fig|306537.3.peg.35
- eggNOG:   COG0296
- HOGENOM:   HBG287139
- OMA:   PPLATIM
- ProtClustDB:   PRK05402
- BioCyc:   CJEI306537:JK1330-MONOMER
- HAMAP:   MF_00685
- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1180
- Gene3D:   G3DSA:3.20.20.80
- Gene3D:   G3DSA:2.60.40.10
- TIGRFAMs:   TIGR01515

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48; SSF51445 Glyco_hydro_cat; SSF81296 Ig_E-set

EC number: =2.4.1.18

Molecular weight: Translated: 79901; Mature: 79901

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: ACT_SITE 287-287 ACT_SITE 322-322 ACT_SITE 327-327 ACT_SITE 390-390 ACT_SITE 392-392 ACT_SITE 443-443 ACT_SITE 510-510 ACT_SITE 511-511

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDYHRLAERRHHAPHDVLGAHENGDGTTTIRTVQCGAESVAVRINGGEPVQMVPAEEY
CCCHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCC
PALFTATVDYFVDTYNFEVTWAGGTAATLEDPYRRLPTVGDLDRYLIGEGRHEELWKVLG
CEEEEEEEEHEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCCHHHHHHHHH
AHVVDGGVAFSVWAPHAAGVSVIGDFNGWNANQHPLRALGSSGIWELWIPSVSAGAHYKF
HHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEE
SITTGDGVRLDKADPMARLAEPAPATASIVVADSDYAWGDDEWLAHRAAVGVDETMSIYE
EEECCCCEEECCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHH
MHLGSWRKGRSYRELAVELVEYVQELGYTHVELMGVSEHPFEPSWGYQVTSYYAPNNRYG
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCC
GPDDLRYLIDSLHRAGIGVIMDWVPGHFPKDGWALGRFDGEACYEHPDPRRGEQPDWGTY
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCE
VFDFGRNEVRNFLVANALYWCKEFHIDGLRVDAVASMLYLDYSRDDWLPNQYGGRENLDA
EEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHEECCCCCCCCCCCCCCCCCHH
VEFLKEMNATVHRECPGSLTIAEESTSWPGVTAPTSEGGLGFSLKWNMGWMHDSLEYIQR
HHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHC
DPAYRSYHHNEITFSMVYAYSENYVLPISHDEVVHGKGTLWSRMPAGSAWDKAAMVRSYL
CCCHHCCCCCCEEEEEEEEECCCEEEECCCCCEEECCCCEEECCCCCCCHHHHHHHHHHH
AFMWAHPGKKLLFQGQEWGQTEEWNESRGLDWHDLEGWEGEFHRGISALTSQLNKLYHSE
HHHHCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LALGQDHAPEGFQWIASDDSTNNVLSFIRRHRGRELACVINFSGTTQENYRIGLPQAGTW
HHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCCCH
REVLNTDDVQYEGAGRVNGDLHTEPTGSHGMEASAVLQIPAHTARWFVLES
HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MNHDYHRLAERRHHAPHDVLGAHENGDGTTTIRTVQCGAESVAVRINGGEPVQMVPAEEY
CCCHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCC
PALFTATVDYFVDTYNFEVTWAGGTAATLEDPYRRLPTVGDLDRYLIGEGRHEELWKVLG
CEEEEEEEEHEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCCHHHHHHHHH
AHVVDGGVAFSVWAPHAAGVSVIGDFNGWNANQHPLRALGSSGIWELWIPSVSAGAHYKF
HHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEE
SITTGDGVRLDKADPMARLAEPAPATASIVVADSDYAWGDDEWLAHRAAVGVDETMSIYE
EEECCCCEEECCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHH
MHLGSWRKGRSYRELAVELVEYVQELGYTHVELMGVSEHPFEPSWGYQVTSYYAPNNRYG
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCC
GPDDLRYLIDSLHRAGIGVIMDWVPGHFPKDGWALGRFDGEACYEHPDPRRGEQPDWGTY
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCE
VFDFGRNEVRNFLVANALYWCKEFHIDGLRVDAVASMLYLDYSRDDWLPNQYGGRENLDA
EEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHEECCCCCCCCCCCCCCCCCHH
VEFLKEMNATVHRECPGSLTIAEESTSWPGVTAPTSEGGLGFSLKWNMGWMHDSLEYIQR
HHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHC
DPAYRSYHHNEITFSMVYAYSENYVLPISHDEVVHGKGTLWSRMPAGSAWDKAAMVRSYL
CCCHHCCCCCCEEEEEEEEECCCEEEECCCCCEEECCCCEEECCCCCCCHHHHHHHHHHH
AFMWAHPGKKLLFQGQEWGQTEEWNESRGLDWHDLEGWEGEFHRGISALTSQLNKLYHSE
HHHHCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LALGQDHAPEGFQWIASDDSTNNVLSFIRRHRGRELACVINFSGTTQENYRIGLPQAGTW
HHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCCCH
REVLNTDDVQYEGAGRVNGDLHTEPTGSHGMEASAVLQIPAHTARWFVLES
HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA