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The map label for this gene is glgE [H]

Identifier: 68536414

GI number: 68536414

Start: 1573016

End: 1575040

Strand: Direct

Name: glgE [H]

Synonym: jk1329

Alternate gene names: 68536414

Gene position: 1573016-1575040 (Clockwise)

Preceding gene: 68536408

Following gene: 68536415

Centisome position: 63.88

GC content: 64.94

Gene sequence:

>2025_bases
ATGACCGGCCGCCTCGGCATCGACTGCATCTCCCCCGTCATCTCCCACGGAGCCACCCCCGCCAAGGCCATCGTCGGCCA
GGTGTTTCCGGTCAGCGCGAGCGTCTGGCGCGAGGGGCACGACGCCATCTCCGCCACCCTCGTCGTCCGTCGCCCCGCCG
GTGCCGAGGGTGGCCGCGCGAAGATCACGATGTCGCCTGACCCCGATGACGTCGACCGTCGCCATGCCGTGTTCGTTCCG
GATGTGCCGGGTATGTGGACCTTTCGTGTTGACGCCTGGTCGGATCCAGCAGCCACATGGTTCAACGCAATCACCAAGAA
GGTAGCCGCAGGACAGGATGCCCAGGCGCTGGCCAATGATTTTGAGCTCGGCGCGCGCCTGTTCGAGCGGGCGGCGGAGA
AGGCCTCCCGTAAGCACCGGGAGCTGGTGGCTTCCGTGCCAGGCCAGCTGCGCGATGAATCCTTGAGCATCGACGAGCGC
CTGGCCACCGCCCTGTCTCCGGAAATCAAGGAGGCCCTGGACAAGCGCCCGCTGCGCGACCTGCTGACCCGCGGCCCGGA
GTTCCACGTGTTGGTGGAGGAAAAGACCGCCGGCGTGGGCGCCTGGTACGAGATGTTCCCCCGCTCCACCGGCGGCTGGG
ATGCCGACGGCAACCCGGTGCACGGCACCTTCGCCACCGCTGCCGCGGACCTGCCGCGCATCGCGGACATGGGCTTCGAC
GTGCTGTACCTGCCGCCGATTCACCCGATCGGCGAGATCAACCGCAAGGGTAAGAACAACACCCTAACCCCTACCCCGGA
GGACGTCGGCTCTCCTTGGGCCATCGGCTCCAAGGACGGCGGACACGAGGCCGTACACCCGCGCCTCGGCACTGTAGAGG
ACTTCGAGAACTTCGTGGCCGCTGCCAACGAGCAGGGGCTAAAGGTGGCCCTGGATCTGGCGCTGCAGTGCGCCCCCGAC
CACCCGTGGGCTAAGGAGCACCCGGAGTGGTTCACCGTGCTGCCGGACGGCACCATCGCCTACGCCGAGAACCCGCCGAA
GAAGTACCAGGACATCTACCCGTTGAACTTCGACAACGATCCGGAGGGTTTATACCGCGAGGTGCTGAAGGTCGTGCGCC
TATGGATCGGCCGGGGCGTGCGAATCTTCCGCGTGGATAACCCGCACACCAAGCCCACGAATTTCTGGCAGTGGCTGATC
GCCGAGGTCCACGCCACCGACCCGGACGTGGTCTTCCTCTCCGAGGCCTTCACCCGACCGCCACGCCTCTACGGTCTTGC
CAAGGCAGGATTCACGCAGTCCTACAGCTACTTCACATGGAAGACAACCAAGGCGGAACTGGAGGAGTTCGCTGGGGACA
TCGCCAACTACGCCGATGTCTTCCGCCCGAACCTATTCGTCAATACCCCGGACATCCTGCACGAATCACTGCAGACCGGC
GGCAAGGCCATGTTCGCCATCCGCGCCGCTCTGGCCTCCACTCTCTCCCCGCTGTGGGGCGTGTACTCCGGCTTTGAAAT
CTACGAATCCACGCCGGTTCACGCCGGCTCGGAGGAATACCTGGACTCCGAGAAGTACGAGCTGCGTCCGCGCGACTACT
CGGTGGACAACTGCGCTGAATGGATCAGGGATCTGAACCTGTGGCGTCAAGAAAACCCGGCGCTACAGCAACAGCGCACC
CTGCGCTTGCACGAAACAACAAGCGATGACCTCCTCGCGTACTCGAAGGTCGACGGCGTTACCGGCAACGCGGTGCTCGT
GGTGGTGAACCTGAACCCCAACGCGATCGTCGAGGGCTCTGTGCACCTGGATACCGAAGCGCTTGGCCTGGGCGCGCCGG
AGGAGGTGCACTTCGAGGTCACCGACCTGCCGACGAACCAGACCTACACCTGGGGCGCCAGCAACTACGTGCGTCTGGAT
CCGGACTTCCAGGTTGCGCACATCTTCCGGCTGCCCACCCTCGGTGAGGGTGAGCGCGAGCGGGTCTGCATGCGAGCTCA
GGAAGAATACGATCCCCGCAGGTAG

Upstream 100 bases:

>100_bases
CTCAAGATCCGCGCGAAGTGTGCCAACAACATAGGCTTGCTGTGTAAGCACCAACGCGAACTGCCAACGGATCCCCACTG
CCATTTAAAGGAGCTTCCCC

Downstream 100 bases:

>100_bases
AATCGGCGGGTATGAACCACGATTACCACCGGCTCGCAGAACGTAGGCACCACGCCCCGCACGACGTGCTTGGGGCACAC
GAGAACGGCGACGGAACCAC

Product: putative alpha-amylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 673

Protein sequence:

>674_residues
MTGRLGIDCISPVISHGATPAKAIVGQVFPVSASVWREGHDAISATLVVRRPAGAEGGRAKITMSPDPDDVDRRHAVFVP
DVPGMWTFRVDAWSDPAATWFNAITKKVAAGQDAQALANDFELGARLFERAAEKASRKHRELVASVPGQLRDESLSIDER
LATALSPEIKEALDKRPLRDLLTRGPEFHVLVEEKTAGVGAWYEMFPRSTGGWDADGNPVHGTFATAAADLPRIADMGFD
VLYLPPIHPIGEINRKGKNNTLTPTPEDVGSPWAIGSKDGGHEAVHPRLGTVEDFENFVAAANEQGLKVALDLALQCAPD
HPWAKEHPEWFTVLPDGTIAYAENPPKKYQDIYPLNFDNDPEGLYREVLKVVRLWIGRGVRIFRVDNPHTKPTNFWQWLI
AEVHATDPDVVFLSEAFTRPPRLYGLAKAGFTQSYSYFTWKTTKAELEEFAGDIANYADVFRPNLFVNTPDILHESLQTG
GKAMFAIRAALASTLSPLWGVYSGFEIYESTPVHAGSEEYLDSEKYELRPRDYSVDNCAEWIRDLNLWRQENPALQQQRT
LRLHETTSDDLLAYSKVDGVTGNAVLVVVNLNPNAIVEGSVHLDTEALGLGAPEEVHFEVTDLPTNQTYTWGASNYVRLD
PDFQVAHIFRLPTLGEGERERVCMRAQEEYDPRR

Sequences:

>Translated_674_residues
MTGRLGIDCISPVISHGATPAKAIVGQVFPVSASVWREGHDAISATLVVRRPAGAEGGRAKITMSPDPDDVDRRHAVFVP
DVPGMWTFRVDAWSDPAATWFNAITKKVAAGQDAQALANDFELGARLFERAAEKASRKHRELVASVPGQLRDESLSIDER
LATALSPEIKEALDKRPLRDLLTRGPEFHVLVEEKTAGVGAWYEMFPRSTGGWDADGNPVHGTFATAAADLPRIADMGFD
VLYLPPIHPIGEINRKGKNNTLTPTPEDVGSPWAIGSKDGGHEAVHPRLGTVEDFENFVAAANEQGLKVALDLALQCAPD
HPWAKEHPEWFTVLPDGTIAYAENPPKKYQDIYPLNFDNDPEGLYREVLKVVRLWIGRGVRIFRVDNPHTKPTNFWQWLI
AEVHATDPDVVFLSEAFTRPPRLYGLAKAGFTQSYSYFTWKTTKAELEEFAGDIANYADVFRPNLFVNTPDILHESLQTG
GKAMFAIRAALASTLSPLWGVYSGFEIYESTPVHAGSEEYLDSEKYELRPRDYSVDNCAEWIRDLNLWRQENPALQQQRT
LRLHETTSDDLLAYSKVDGVTGNAVLVVVNLNPNAIVEGSVHLDTEALGLGAPEEVHFEVTDLPTNQTYTWGASNYVRLD
PDFQVAHIFRLPTLGEGERERVCMRAQEEYDPRR
>Mature_673_residues
TGRLGIDCISPVISHGATPAKAIVGQVFPVSASVWREGHDAISATLVVRRPAGAEGGRAKITMSPDPDDVDRRHAVFVPD
VPGMWTFRVDAWSDPAATWFNAITKKVAAGQDAQALANDFELGARLFERAAEKASRKHRELVASVPGQLRDESLSIDERL
ATALSPEIKEALDKRPLRDLLTRGPEFHVLVEEKTAGVGAWYEMFPRSTGGWDADGNPVHGTFATAAADLPRIADMGFDV
LYLPPIHPIGEINRKGKNNTLTPTPEDVGSPWAIGSKDGGHEAVHPRLGTVEDFENFVAAANEQGLKVALDLALQCAPDH
PWAKEHPEWFTVLPDGTIAYAENPPKKYQDIYPLNFDNDPEGLYREVLKVVRLWIGRGVRIFRVDNPHTKPTNFWQWLIA
EVHATDPDVVFLSEAFTRPPRLYGLAKAGFTQSYSYFTWKTTKAELEEFAGDIANYADVFRPNLFVNTPDILHESLQTGG
KAMFAIRAALASTLSPLWGVYSGFEIYESTPVHAGSEEYLDSEKYELRPRDYSVDNCAEWIRDLNLWRQENPALQQQRTL
RLHETTSDDLLAYSKVDGVTGNAVLVVVNLNPNAIVEGSVHLDTEALGLGAPEEVHFEVTDLPTNQTYTWGASNYVRLDP
DFQVAHIFRLPTLGEGERERVCMRAQEEYDPRR

Specific function: Could be involved in glycogen catabolism [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF11896 DUF3416 [H]

EC number: NA

Molecular weight: Translated: 74895; Mature: 74763

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRLGIDCISPVISHGATPAKAIVGQVFPVSASVWREGHDAISATLVVRRPAGAEGGRA
CCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCHHEEEEEEEECCCCCCCCEE
KITMSPDPDDVDRRHAVFVPDVPGMWTFRVDAWSDPAATWFNAITKKVAAGQDAQALAND
EEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHH
FELGARLFERAAEKASRKHRELVASVPGQLRDESLSIDERLATALSPEIKEALDKRPLRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCHHHHHHHHCCCHHH
LLTRGPEFHVLVEEKTAGVGAWYEMFPRSTGGWDADGNPVHGTFATAAADLPRIADMGFD
HHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCC
VLYLPPIHPIGEINRKGKNNTLTPTPEDVGSPWAIGSKDGGHEAVHPRLGTVEDFENFVA
EEEECCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AANEQGLKVALDLALQCAPDHPWAKEHPEWFTVLPDGTIAYAENPPKKYQDIYPLNFDND
HCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCCCC
PEGLYREVLKVVRLWIGRGVRIFRVDNPHTKPTNFWQWLIAEVHATDPDVVFLSEAFTRP
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCC
PRLYGLAKAGFTQSYSYFTWKTTKAELEEFAGDIANYADVFRPNLFVNTPDILHESLQTG
CHHEEEHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCC
GKAMFAIRAALASTLSPLWGVYSGFEIYESTPVHAGSEEYLDSEKYELRPRDYSVDNCAE
CHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHCCCCCEECCCCCCCHHHHHH
WIRDLNLWRQENPALQQQRTLRLHETTSDDLLAYSKVDGVTGNAVLVVVNLNPNAIVEGS
HHHHHHHHHCCCCHHHHHHHEEEECCCCCCCEEEHHCCCCCCCEEEEEEECCCCEEEECC
VHLDTEALGLGAPEEVHFEVTDLPTNQTYTWGASNYVRLDPDFQVAHIFRLPTLGEGERE
EEECHHHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCEEEEEEECCCCCCCHHH
RVCMRAQEEYDPRR
HHHHHHHHHCCCCC
>Mature Secondary Structure 
TGRLGIDCISPVISHGATPAKAIVGQVFPVSASVWREGHDAISATLVVRRPAGAEGGRA
CCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCHHEEEEEEEECCCCCCCCEE
KITMSPDPDDVDRRHAVFVPDVPGMWTFRVDAWSDPAATWFNAITKKVAAGQDAQALAND
EEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHH
FELGARLFERAAEKASRKHRELVASVPGQLRDESLSIDERLATALSPEIKEALDKRPLRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCHHHHHHHHCCCHHH
LLTRGPEFHVLVEEKTAGVGAWYEMFPRSTGGWDADGNPVHGTFATAAADLPRIADMGFD
HHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCC
VLYLPPIHPIGEINRKGKNNTLTPTPEDVGSPWAIGSKDGGHEAVHPRLGTVEDFENFVA
EEEECCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AANEQGLKVALDLALQCAPDHPWAKEHPEWFTVLPDGTIAYAENPPKKYQDIYPLNFDND
HCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCCCC
PEGLYREVLKVVRLWIGRGVRIFRVDNPHTKPTNFWQWLIAEVHATDPDVVFLSEAFTRP
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCC
PRLYGLAKAGFTQSYSYFTWKTTKAELEEFAGDIANYADVFRPNLFVNTPDILHESLQTG
CHHEEEHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCC
GKAMFAIRAALASTLSPLWGVYSGFEIYESTPVHAGSEEYLDSEKYELRPRDYSVDNCAE
CHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHCCCCCEECCCCCCCHHHHHH
WIRDLNLWRQENPALQQQRTLRLHETTSDDLLAYSKVDGVTGNAVLVVVNLNPNAIVEGS
HHHHHHHHHCCCCHHHHHHHEEEECCCCCCCEEEHHCCCCCCCEEEEEEECCCCEEEECC
VHLDTEALGLGAPEEVHFEVTDLPTNQTYTWGASNYVRLDPDFQVAHIFRLPTLGEGERE
EEECHHHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCEEEEEEECCCCCCCHHH
RVCMRAQEEYDPRR
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10542168 [H]